RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 EDEM3Q9BZQ6 932 aa15.98■□□□□ 0.15
TRIM28-207ENST00000597136 DZANK1Q9NVP4 752 aa15.98■□□□□ 0.15
TRIM28-207ENST00000597136 HMGXB4Q9UGU5 601 aa15.98■□□□□ 0.15
TRIM28-207ENST00000597136 DNAJC12Q9UKB3 198 aa15.98■□□□□ 0.15
TRIM28-207ENST00000597136 AJAP1Q9UKB5 411 aaPredicted RBP15.98■□□□□ 0.15
TRIM28-207ENST00000597136 CAPN11Q9UMQ6 739 aa15.98■□□□□ 0.15
TRIM28-207ENST00000597136 DAAM1Q9Y4D1 1078 aa15.98■□□□□ 0.15
TRIM28-207ENST00000597136 PATJQ8NI35 1801 aa15.98■□□□□ 0.15
TRIM28-207ENST00000597136 MYO16Q9Y6X6 1858 aa15.97■□□□□ 0.15
TRIM28-207ENST00000597136 FAM163BP0C2L3 166 aa15.97■□□□□ 0.15
TRIM28-207ENST00000597136 IL9P15248 144 aa15.97■□□□□ 0.15
TRIM28-207ENST00000597136 HOXB8P17481 243 aaPredicted RBP15.97■□□□□ 0.15
TRIM28-207ENST00000597136 RFX1P22670 979 aa15.97■□□□□ 0.15
TRIM28-207ENST00000597136 MRPS5P82675 430 aaKnown RBP15.97■□□□□ 0.15
TRIM28-207ENST00000597136 GCNT1Q02742 428 aa15.97■□□□□ 0.15
TRIM28-207ENST00000597136 CCDC173Q0VFZ6 552 aa15.97■□□□□ 0.15
TRIM28-207ENST00000597136 INTS6LQ5JSJ4 861 aaKnown RBP15.97■□□□□ 0.15
TRIM28-207ENST00000597136 FAM171BQ6P995 826 aa15.97■□□□□ 0.15
TRIM28-207ENST00000597136 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.97■□□□□ 0.159e-7■□□□□ 11.1
TRIM28-207ENST00000597136 TCEAL8Q8IYN2 117 aa15.97■□□□□ 0.15
TRIM28-207ENST00000597136 SPATA18Q8TC71 538 aa15.97■□□□□ 0.15
TRIM28-207ENST00000597136 KREMEN1Q96MU8 473 aa15.97■□□□□ 0.15
TRIM28-207ENST00000597136 PPP1R9BQ96SB3 815 aa15.97■□□□□ 0.15
TRIM28-207ENST00000597136 SYT15Q9BQS2 421 aa15.97■□□□□ 0.15
TRIM28-207ENST00000597136 RHOBTB2Q9BYZ6 727 aa15.97■□□□□ 0.15
TRIM28-207ENST00000597136 NIF3L1Q9GZT8 377 aa15.97■□□□□ 0.15
TRIM28-207ENST00000597136 ADAM7Q9H2U9 754 aa15.97■□□□□ 0.15
TRIM28-207ENST00000597136 SFXN1Q9H9B4 322 aa15.97■□□□□ 0.15
TRIM28-207ENST00000597136 NLRC4Q9NPP4 1024 aa15.97■□□□□ 0.15
TRIM28-207ENST00000597136 USP15Q9Y4E8 981 aaPredicted RBP15.97■□□□□ 0.15
TRIM28-207ENST00000597136 A8MXQ7 604 aa15.96■□□□□ 0.15
TRIM28-207ENST00000597136 PRRG1O14668 218 aa15.96■□□□□ 0.15
TRIM28-207ENST00000597136 CCL16O15467 120 aa15.96■□□□□ 0.15
TRIM28-207ENST00000597136 TPM1P09493 284 aa15.96■□□□□ 0.15
TRIM28-207ENST00000597136 BMP1P13497 986 aa15.96■□□□□ 0.15
TRIM28-207ENST00000597136 CD58P19256 250 aa15.96■□□□□ 0.15
TRIM28-207ENST00000597136 ELF1P32519 619 aa15.96■□□□□ 0.15
TRIM28-207ENST00000597136 NDST1P52848 882 aa15.96■□□□□ 0.15
TRIM28-207ENST00000597136 PPM1LQ5SGD2 360 aa15.96■□□□□ 0.15
TRIM28-207ENST00000597136 LIN9Q5TKA1 542 aa15.96■□□□□ 0.15
TRIM28-207ENST00000597136 CACNA2D4Q7Z3S7 1137 aa15.96■□□□□ 0.15
TRIM28-207ENST00000597136 ATXN2LQ8WWM7 1075 aaKnown RBP15.96■□□□□ 0.15
TRIM28-207ENST00000597136 BAP1Q92560 729 aa15.96■□□□□ 0.15
TRIM28-207ENST00000597136 KAT5Q92993 513 aa15.96■□□□□ 0.15
TRIM28-207ENST00000597136 FAXDC2Q96IV6 333 aa15.96■□□□□ 0.15
TRIM28-207ENST00000597136 ASB2Q96Q27 587 aa15.96■□□□□ 0.15
TRIM28-207ENST00000597136 TWNKQ96RR1 684 aa15.96■□□□□ 0.15
TRIM28-207ENST00000597136 STK33Q9BYT3 514 aa15.96■□□□□ 0.15
TRIM28-207ENST00000597136 CDH9Q9ULB4 789 aa15.96■□□□□ 0.15
TRIM28-207ENST00000597136 LUC7L2Q9Y383 392 aaKnown RBP15.96■□□□□ 0.15
TRIM28-207ENST00000597136 P4HA1P13674 534 aa15.96■□□□□ 0.14
TRIM28-207ENST00000597136 PTPN1P18031 435 aaKnown RBP15.96■□□□□ 0.14
TRIM28-207ENST00000597136 TBXAS1P24557 533 aaPredicted RBP15.96■□□□□ 0.14
TRIM28-207ENST00000597136 PCSK1P29120 753 aa15.96■□□□□ 0.14
TRIM28-207ENST00000597136 MFAP3P55082 362 aa15.96■□□□□ 0.14
TRIM28-207ENST00000597136 ADKP55263 362 aaKnown RBP15.96■□□□□ 0.14
TRIM28-207ENST00000597136 ZBED6P86452 979 aa15.96■□□□□ 0.14
TRIM28-207ENST00000597136 TSPY1Q01534 308 aa15.96■□□□□ 0.14
TRIM28-207ENST00000597136 GOLGA8FQ08AF8 430 aa15.96■□□□□ 0.14
TRIM28-207ENST00000597136 GOLGA8DPQ0D2H9 430 aa15.96■□□□□ 0.14
TRIM28-207ENST00000597136 CUL2Q13617 745 aa15.96■□□□□ 0.14
TRIM28-207ENST00000597136 RAPGEF1Q13905 1077 aa15.96■□□□□ 0.14
TRIM28-207ENST00000597136 ENOSF1Q7L5Y1 443 aa15.96■□□□□ 0.14
TRIM28-207ENST00000597136 GPR149Q86SP6 731 aa15.96■□□□□ 0.14
TRIM28-207ENST00000597136 ACOT1Q86TX2 421 aa15.96■□□□□ 0.14
TRIM28-207ENST00000597136 DCP1BQ8IZD4 617 aaKnown RBP15.96■□□□□ 0.14
TRIM28-207ENST00000597136 ZNF397Q8NF99 534 aaPredicted RBP15.96■□□□□ 0.14
TRIM28-207ENST00000597136 WHAMMQ8TF30 809 aa15.96■□□□□ 0.14
TRIM28-207ENST00000597136 SUSD6Q92537 303 aa15.96■□□□□ 0.14
TRIM28-207ENST00000597136 FAM81BQ96LP2 452 aa15.96■□□□□ 0.14
TRIM28-207ENST00000597136 PRKD2Q9BZL6 878 aa15.96■□□□□ 0.14
TRIM28-207ENST00000597136 HCFC1R1Q9NWW0 138 aa15.96■□□□□ 0.14
TRIM28-207ENST00000597136 ABI2Q9NYB9 513 aaPredicted RBP15.96■□□□□ 0.14
TRIM28-207ENST00000597136 INSL5Q9Y5Q6 135 aa15.96■□□□□ 0.14
TRIM28-207ENST00000597136 GOLGA6L6A8MZA4 724 aa15.95■□□□□ 0.14
TRIM28-207ENST00000597136 AKR1B15C9JRZ8 316 aaPredicted RBP15.95■□□□□ 0.14
TRIM28-207ENST00000597136 MFAP3LO75121 409 aa15.95■□□□□ 0.14
TRIM28-207ENST00000597136 CYP2F1P24903 491 aa15.95■□□□□ 0.14
TRIM28-207ENST00000597136 KRT9P35527 623 aa15.95■□□□□ 0.14
TRIM28-207ENST00000597136 JAM2P57087 298 aa15.95■□□□□ 0.14
TRIM28-207ENST00000597136 NTHL1P78549 312 aa15.95■□□□□ 0.14
TRIM28-207ENST00000597136 SMAD4Q13485 552 aaKnown RBP15.95■□□□□ 0.14
TRIM28-207ENST00000597136 DRAP1Q14919 205 aaPredicted RBP15.95■□□□□ 0.14
TRIM28-207ENST00000597136 ARHGAP44Q17R89 818 aa15.95■□□□□ 0.14
TRIM28-207ENST00000597136 MDH1BQ5I0G3 518 aa15.95■□□□□ 0.14
TRIM28-207ENST00000597136 CCDC149Q6ZUS6 474 aa15.95■□□□□ 0.14
TRIM28-207ENST00000597136 CMASQ8NFW8 434 aaPredicted RBP15.95■□□□□ 0.14
TRIM28-207ENST00000597136 SMG7Q92540 1137 aaKnown RBP15.95■□□□□ 0.14
TRIM28-207ENST00000597136 CYP3A43Q9HB55 503 aa15.95■□□□□ 0.14
TRIM28-207ENST00000597136 ZDHHC7Q9NXF8 308 aa15.95■□□□□ 0.14
TRIM28-207ENST00000597136 DPP7Q9UHL4 492 aa15.95■□□□□ 0.14
TRIM28-207ENST00000597136 MYO6Q9UM54 1294 aa15.95■□□□□ 0.14
TRIM28-207ENST00000597136 CUL9Q8IWT3 2517 aa15.95■□□□□ 0.14
TRIM28-207ENST00000597136 CLDN5O00501 218 aa15.94■□□□□ 0.14
TRIM28-207ENST00000597136 PAPLNO95428 1278 aa15.94■□□□□ 0.14
TRIM28-207ENST00000597136 GPR15P49685 360 aa15.94■□□□□ 0.14
TRIM28-207ENST00000597136 ITIH3Q06033 890 aa15.94■□□□□ 0.14
TRIM28-207ENST00000597136 INCA1Q0VD86 236 aa15.94■□□□□ 0.14
TRIM28-207ENST00000597136 TWF1Q12792 350 aa15.94■□□□□ 0.14
TRIM28-207ENST00000597136 ZNF394Q53GI3 561 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms