RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 TMEM150AQ86TG1 271 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 ENGASEQ8NFI3 743 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 MYCBPAPQ8TBZ2 947 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 CLDN23Q96B33 292 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 RSPRY1Q96DX4 576 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 TRMT2BQ96GJ1 504 aaKnown RBP11.25□□□□□ -0.61
CCDC9-203ENST00000596938 SPATA17Q96L03 361 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 LRRC3BQ96PB8 259 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 GCNAQ96QF7 691 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 PHOX2BQ99453 314 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 SYT15Q9BQS2 421 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 MRPL45Q9BRJ2 306 aaKnown RBP11.25□□□□□ -0.61
CCDC9-203ENST00000596938 FOXQ1Q9C009 403 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 CRTAC1Q9NQ79 661 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 HEBP1Q9NRV9 189 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 UXTQ9UBK9 157 aaPredicted RBP11.25□□□□□ -0.61
CCDC9-203ENST00000596938 MRPS17Q9Y2R5 130 aaKnown RBP11.25□□□□□ -0.61
CCDC9-203ENST00000596938 MYH15Q9Y2K3 1946 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 USP34Q70CQ2 3546 aa11.25□□□□□ -0.61
CCDC9-203ENST00000596938 SHISA7A6NL88 538 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 SLC38A8A6NNN8 435 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 ARNTLO00327 626 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 DPYSL4O14531 572 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 NCAM2O15394 837 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 PTPN1P18031 435 aaKnown RBP11.24□□□□□ -0.61
CCDC9-203ENST00000596938 CD72P21854 359 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 RPL13P26373 211 aaKnown RBP11.24□□□□□ -0.61
CCDC9-203ENST00000596938 NBL1P41271 181 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 MAGEA9P43362 315 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 GPR15P49685 360 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 DLG4P78352 724 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 BIRC3Q13489 604 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 NCOA4Q13772 614 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 ANGPT1Q15389 498 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 SGSM1Q2NKQ1 1148 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 ZACNQ401N2 412 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 CEP135Q66GS9 1140 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 TPRG1Q6ZUI0 275 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 MON1AQ86VX9 555 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 C1orf210Q8IVY1 113 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 YAF2Q8IY57 180 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 ELOA2Q8IYF1 753 aaPredicted RBP11.24□□□□□ -0.61
CCDC9-203ENST00000596938 CMTM8Q8IZV2 173 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 OR6B3Q8NGW1 331 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 SPATA20Q8TB22 786 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 TAF4BQ92750 862 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 TIGD1Q96MW7 591 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 GSDMAQ96QA5 445 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 GTPBP4Q9BZE4 634 aaKnown RBP11.24□□□□□ -0.61
CCDC9-203ENST00000596938 LTB4R2Q9NPC1 389 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 RMND1Q9NWS8 449 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 NXF1Q9UBU9 619 aaKnown RBP11.24□□□□□ -0.61
CCDC9-203ENST00000596938 MAPK8IP1Q9UQF2 711 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 MTF2Q9Y483 593 aaPredicted RBP11.24□□□□□ -0.61
CCDC9-203ENST00000596938 SCN1AP35498 2009 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 DOCK6Q96HP0 2047 aa11.24□□□□□ -0.61
CCDC9-203ENST00000596938 MYO15AQ9UKN7 3530 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 ANK1P16157 1881 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 DMDP11532 3685 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 AKAP3O75969 853 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 VNN1O95497 513 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 BDNFP23560 247 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 NR2F2P24468 414 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 RPS9P46781 194 aaKnown RBP11.23□□□□□ -0.61
CCDC9-203ENST00000596938 PSMC1P62191 440 aaKnown RBP11.23□□□□□ -0.61
CCDC9-203ENST00000596938 CYP4F8P98187 520 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 FAM160A1Q05DH4 1040 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 ADAM9Q13443 819 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 FZD5Q13467 585 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 UBXN2BQ14CS0 331 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 CCDC142Q17RM4 750 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 ZNF699Q32M78 642 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 EDRF1Q3B7T1 1238 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 ZCWPW2Q504Y3 356 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 ARHGAP29Q52LW3 1261 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 COBLL1Q53SF7 1204 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 ZNF667Q5HYK9 610 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 C1orf220Q5T0J3 134 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 SDHAF4Q5VUM1 108 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 C1orf228Q6PIY5 440 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 MAMSTRQ6ZN01 415 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 INTS8Q75QN2 995 aaKnown RBP11.23□□□□□ -0.61
CCDC9-203ENST00000596938 SV2AQ7L0J3 742 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 SCN4BQ8IWT1 228 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 ZNF687Q8N1G0 1237 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 CELF5Q8N6W0 485 aaKnown RBP11.23□□□□□ -0.61
CCDC9-203ENST00000596938 BPIFB1Q8TDL5 484 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 MRPS31Q92665 395 aaKnown RBP11.23□□□□□ -0.61
CCDC9-203ENST00000596938 MYLPFQ96A32 169 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 MSANTD3Q96H12 275 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 PCED1BQ96HM7 432 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 C8orf48Q96LL4 319 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 BCO2Q9BYV7 579 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 C8orf33Q9H7E9 229 aaPredicted RBP11.23□□□□□ -0.61
CCDC9-203ENST00000596938 FAM86C1Q9NVL1 165 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 THG1LQ9NWX6 298 aaKnown RBP11.23□□□□□ -0.61
CCDC9-203ENST00000596938 MAGED2Q9UNF1 606 aaPredicted RBP11.23□□□□□ -0.61
CCDC9-203ENST00000596938 NME7Q9Y5B8 376 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 NCANO14594 1321 aa11.23□□□□□ -0.61
CCDC9-203ENST00000596938 VPS13AQ96RL7 3174 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms