RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 RAB27AP51159 221 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 PTK6Q13882 451 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 FAM153CQ494X1 144 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 UBXN11Q5T124 520 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 EMC10Q5UCC4 262 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 LIMS2Q7Z4I7 341 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 ADAT2Q7Z6V5 191 aaKnown RBP10.95□□□□□ -0.66
VPS25-203ENST00000589520 PHLDB2Q86SQ0 1253 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 TMEM110Q86TL2 294 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 VSIG1Q86XK7 387 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 TSEN2Q8NCE0 465 aaKnown RBP10.95□□□□□ -0.66
VPS25-203ENST00000589520 SPATA18Q8TC71 538 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 ART4Q93070 314 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 HSFY1Q96LI6 401 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 ZMAT2Q96NC0 199 aaKnown RBP10.95□□□□□ -0.66
VPS25-203ENST00000589520 ZIM3Q96PE6 472 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 TWNKQ96RR1 684 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 HINFPQ9BQA5 517 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 TRAIPQ9BWF2 469 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 CFHR5Q9BXR6 569 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 DPH5Q9H2P9 285 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 ZDHHC18Q9NUE0 388 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 GOLGA6AQ9NYA3 693 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 FAM153AQ9UHL3 310 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 TSPAN16Q9UKR8 245 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 FAN1Q9Y2M0 1017 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 IPPQ9Y573 584 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 HMGB1P1B2RPK0 211 aaPredicted RBP10.94□□□□□ -0.66
VPS25-203ENST00000589520 F8VP50 259 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 HUS1O60921 280 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 KRT1P04264 644 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 MYZAPP0CAP1 466 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 RALAP11233 206 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 RARGP13631 454 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 GPD1P21695 349 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 WARSP23381 471 aaKnown RBP10.94□□□□□ -0.66
VPS25-203ENST00000589520 RFC1P35251 1148 aaPredicted RBP10.94□□□□□ -0.66
VPS25-203ENST00000589520 GNL1P36915 607 aaPredicted RBP10.94□□□□□ -0.66
VPS25-203ENST00000589520 HSD17B3P37058 310 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 ZNF143P52747 638 aaPredicted RBP10.94□□□□□ -0.66
VPS25-203ENST00000589520 SLC8A3P57103 927 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 DHX9Q08211 1270 aaKnown RBP10.94□□□□□ -0.66
VPS25-203ENST00000589520 HIC1Q14526 733 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 NBPF20Q3BBV1 942 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 PKDCCQ504Y2 493 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 BOLA3Q53S33 107 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 C2CD6Q53TS8 623 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 TFDP3Q5H9I0 405 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 ZFYVE27Q5T4F4 411 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 TWF2Q6IBS0 349 aaKnown RBP10.94□□□□□ -0.66
VPS25-203ENST00000589520 AADACL2Q6P093 401 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 TTC27Q6P3X3 843 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 ZNF365Q70YC5 407 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 TMC3Q7Z5M5 1100 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 SERINC5Q86VE9 423 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 MAP7D3Q8IWC1 876 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 ZDHHC14Q8IZN3 488 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 ARFGAP2Q8N6H7 521 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 ANKRD52Q8NB46 1076 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 TRPV1Q8NER1 839 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 APPL2Q8NEU8 664 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 OR6B3Q8NGW1 331 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 SLITRK1Q96PX8 696 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 CPXM1Q96SM3 734 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 TRIM51Q9BSJ1 452 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 CNPY3Q9BT09 278 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 SLC4A5Q9BY07 1137 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 SEZ6LQ9BYH1 1024 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 TXLNGYQ9BZA5 131 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 TRIM7Q9C029 511 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 SNX25Q9H3E2 840 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 NXF3Q9H4D5 531 aaKnown RBP10.94□□□□□ -0.66
VPS25-203ENST00000589520 UBN1Q9NPG3 1134 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 GIT1Q9Y2X7 761 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 SNX24Q9Y343 169 aa10.94□□□□□ -0.66
VPS25-203ENST00000589520 A8MXQ7 604 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 SMAPO00193 183 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 DLL1O00548 723 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 DPYSL4O14531 572 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 ZNF623O75123 536 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 NUDT17P0C025 328 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 RPL9P32969 192 aaKnown RBP10.93□□□□□ -0.66
VPS25-203ENST00000589520 RPL34P49207 117 aaKnown RBP10.93□□□□□ -0.66
VPS25-203ENST00000589520 PMS2P54278 862 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 BCAT1P54687 386 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 PLTPP55058 493 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 ZNF200P98182 395 aaPredicted RBP10.93□□□□□ -0.66
VPS25-203ENST00000589520 SLC6A3Q01959 620 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 SP3Q02447 781 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 DMTNQ08495 405 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 ARHGEF6Q15052 776 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 TRADDQ15628 312 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 TAZQ16635 292 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 CYP4A22Q5TCH4 519 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 AGBL2Q5U5Z8 902 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 OR6B2Q6IFH4 312 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 SPOCD1Q6ZMY3 1216 aa10.93□□□□□ -0.66
VPS25-203ENST00000589520 TRMT10CQ7L0Y3 403 aaKnown RBP10.93□□□□□ -0.66
VPS25-203ENST00000589520 MRPL10Q7Z7H8 261 aaKnown RBP10.93□□□□□ -0.66
VPS25-203ENST00000589520 HOOK3Q86VS8 718 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms