RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 SOAT2O75908 522 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 TPM2P07951 284 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 ZNF18P17022 549 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 CDK11BP21127 795 aaKnown RBP16.4■□□□□ 0.22
IFT20-206ENST00000578122 TBXAS1P24557 533 aaPredicted RBP16.4■□□□□ 0.22
IFT20-206ENST00000578122 ALDH1A3P47895 512 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 CYP27A1Q02318 531 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 PLD1Q13393 1074 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 ORC1Q13415 861 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 KRT31Q15323 416 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 MGAT5BQ3V5L5 792 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 TJAP1Q5JTD0 557 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 ACOT1Q86TX2 421 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 CRYBG2Q8N1P7 616 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 ELMOD1Q8N336 334 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 TTC39CQ8N584 583 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 ANKRD20A12PQ8NF67 263 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 MYLPFQ96A32 169 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 FUBP3Q96I24 572 aaKnown RBP eCLIP16.4■□□□□ 0.22
IFT20-206ENST00000578122 ARID3AQ99856 593 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 NT5C1AQ9BXI3 368 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 DNAI2Q9GZS0 605 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 POMKQ9H5K3 350 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 FAM124BQ9H5Z6 455 aaPredicted RBP16.4■□□□□ 0.22
IFT20-206ENST00000578122 CISHQ9NSE2 258 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 HMGXB4Q9UGU5 601 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 NOTCH4Q99466 2003 aa16.4■□□□□ 0.22
IFT20-206ENST00000578122 DENND4AQ7Z401 1863 aa16.39■□□□□ 0.22
IFT20-206ENST00000578122 CYP2F1P24903 491 aa16.39■□□□□ 0.21
IFT20-206ENST00000578122 EPHB3P54753 998 aa16.39■□□□□ 0.21
IFT20-206ENST00000578122 YWHAEP62258 255 aaKnown RBP16.39■□□□□ 0.21
IFT20-206ENST00000578122 EXOC3L4Q17RC7 722 aa16.39■□□□□ 0.21
IFT20-206ENST00000578122 CFAP221Q4G0U5 840 aa16.39■□□□□ 0.21
IFT20-206ENST00000578122 ARHGEF19Q8IW93 802 aa16.39■□□□□ 0.21
IFT20-206ENST00000578122 PPM1KQ8N3J5 372 aa16.39■□□□□ 0.21
IFT20-206ENST00000578122 WHAMMQ8TF30 809 aa16.39■□□□□ 0.21
IFT20-206ENST00000578122 PCED1BQ96HM7 432 aa16.39■□□□□ 0.21
IFT20-206ENST00000578122 TWNKQ96RR1 684 aa16.39■□□□□ 0.21
IFT20-206ENST00000578122 ELOVL4Q9GZR5 314 aa16.39■□□□□ 0.21
IFT20-206ENST00000578122 VPS16Q9H269 839 aa16.39■□□□□ 0.21
IFT20-206ENST00000578122 HSD3B7Q9H2F3 369 aa16.39■□□□□ 0.21
IFT20-206ENST00000578122 HCFC1R1Q9NWW0 138 aa16.39■□□□□ 0.21
IFT20-206ENST00000578122 LIMA1Q9UHB6 759 aaKnown RBP16.39■□□□□ 0.21
IFT20-206ENST00000578122 BECN2A8MW95 431 aa16.38■□□□□ 0.21
IFT20-206ENST00000578122 CAVIN2O95810 425 aa16.38■□□□□ 0.21
IFT20-206ENST00000578122 PTPN2P17706 415 aa16.38■□□□□ 0.21
IFT20-206ENST00000578122 TRIM21P19474 475 aaKnown RBP16.38■□□□□ 0.21
IFT20-206ENST00000578122 SLC9A1P19634 815 aa16.38■□□□□ 0.21
IFT20-206ENST00000578122 PON1P27169 355 aa16.38■□□□□ 0.21
IFT20-206ENST00000578122 MAGEA11P43364 429 aa16.38■□□□□ 0.21
IFT20-206ENST00000578122 COPB1P53618 953 aaKnown RBP16.38■□□□□ 0.21
IFT20-206ENST00000578122 IQCB1Q15051 598 aa16.38■□□□□ 0.21
IFT20-206ENST00000578122 RRAGAQ7L523 313 aa16.38■□□□□ 0.21
IFT20-206ENST00000578122 GRASPQ7Z6J2 395 aaPredicted RBP16.38■□□□□ 0.21
IFT20-206ENST00000578122 FAM200AQ8TCP9 573 aa16.38■□□□□ 0.21
IFT20-206ENST00000578122 ZNF512Q96ME7 567 aaPredicted RBP16.38■□□□□ 0.21
IFT20-206ENST00000578122 PHF7Q9BWX1 381 aaPredicted RBP16.38■□□□□ 0.21
IFT20-206ENST00000578122 B3GNT5Q9BYG0 378 aa16.38■□□□□ 0.21
IFT20-206ENST00000578122 CBX8Q9HC52 389 aa16.38■□□□□ 0.21
IFT20-206ENST00000578122 WDR6Q9NNW5 1121 aaKnown RBP16.38■□□□□ 0.21
IFT20-206ENST00000578122 CEP72Q9P209 647 aa16.38■□□□□ 0.21
IFT20-206ENST00000578122 DNMT3BQ9UBC3 853 aaKnown RBP16.38■□□□□ 0.21
IFT20-206ENST00000578122 CLUHO75153 1309 aa16.38■□□□□ 0.21
IFT20-206ENST00000578122 CLDN5O00501 218 aa16.37■□□□□ 0.21
IFT20-206ENST00000578122 BDNFP23560 247 aa16.37■□□□□ 0.21
IFT20-206ENST00000578122 RAD23BP54727 409 aa16.37■□□□□ 0.21
IFT20-206ENST00000578122 RPL10AP62906 217 aaKnown RBP16.37■□□□□ 0.21
IFT20-206ENST00000578122 NTHL1P78549 312 aa16.37■□□□□ 0.21
IFT20-206ENST00000578122 ZNF394Q53GI3 561 aa16.37■□□□□ 0.21
IFT20-206ENST00000578122 IQCEQ6IPM2 695 aa16.37■□□□□ 0.21
IFT20-206ENST00000578122 PHLDB3Q6NSJ2 640 aa16.37■□□□□ 0.21
IFT20-206ENST00000578122 TRIM65Q6PJ69 517 aa16.37■□□□□ 0.21
IFT20-206ENST00000578122 VSTM1Q6UX27 236 aa16.37■□□□□ 0.21
IFT20-206ENST00000578122 SCN4BQ8IWT1 228 aa16.37■□□□□ 0.21
IFT20-206ENST00000578122 UBR7Q8N806 425 aa16.37■□□□□ 0.21
IFT20-206ENST00000578122 KAT5Q92993 513 aa16.37■□□□□ 0.21
IFT20-206ENST00000578122 CORO1BQ9BR76 489 aa16.37■□□□□ 0.21
IFT20-206ENST00000578122 MED10Q9BTT4 135 aa16.37■□□□□ 0.21
IFT20-206ENST00000578122 UBE2TQ9NPD8 197 aaPredicted RBP16.37■□□□□ 0.21
IFT20-206ENST00000578122 PRKAG3Q9UGI9 489 aa16.37■□□□□ 0.21
IFT20-206ENST00000578122 ASB3Q9Y575 518 aa16.37■□□□□ 0.21
IFT20-206ENST00000578122 ATP8B3O60423 1300 aa16.37■□□□□ 0.21
IFT20-206ENST00000578122 DOCK8Q8NF50 2099 aa16.36■□□□□ 0.21
IFT20-206ENST00000578122 REV3LO60673 3130 aa16.36■□□□□ 0.21
IFT20-206ENST00000578122 RHOP08100 348 aa16.36■□□□□ 0.21
IFT20-206ENST00000578122 ATP1A3P13637 1013 aa16.36■□□□□ 0.21
IFT20-206ENST00000578122 ATF6P18850 670 aa16.36■□□□□ 0.21
IFT20-206ENST00000578122 FSHRP23945 695 aa16.36■□□□□ 0.21
IFT20-206ENST00000578122 GPR15P49685 360 aa16.36■□□□□ 0.21
IFT20-206ENST00000578122 GCNT1Q02742 428 aa16.36■□□□□ 0.21
IFT20-206ENST00000578122 VEPH1Q14D04 833 aa16.36■□□□□ 0.21
IFT20-206ENST00000578122 DDR2Q16832 855 aa16.36■□□□□ 0.21
IFT20-206ENST00000578122 PABPC1LQ4VXU2 614 aaKnown RBP16.36■□□□□ 0.21
IFT20-206ENST00000578122 FKBP15Q5T1M5 1219 aa16.36■□□□□ 0.21
IFT20-206ENST00000578122 DNAJB7Q7Z6W7 309 aaPredicted RBP16.36■□□□□ 0.21
IFT20-206ENST00000578122 ITIH5Q86UX2 942 aa16.36■□□□□ 0.21
IFT20-206ENST00000578122 ADHFE1Q8IWW8 467 aa16.36■□□□□ 0.21
IFT20-206ENST00000578122 FUKQ8N0W3 1084 aa16.36■□□□□ 0.21
IFT20-206ENST00000578122 C12orf29Q8N999 325 aa16.36■□□□□ 0.21
IFT20-206ENST00000578122 GIPC2Q8TF65 315 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms