RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 SYNE4Q8N205 404 aa16.47■□□□□ 0.23
CACNA1A-202ENST00000573710 EIF4A1P60842 406 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 NEK5Q6P3R8 708 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 PI16Q6UXB8 463 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 BRINP3Q76B58 766 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 SETD3Q86TU7 594 aaPredicted RBP16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 MCPH1Q8NEM0 835 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 STK33Q9BYT3 514 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 MIR1-1HGQ9H1L0 117 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 DBR1Q9UK59 544 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 NPHP3-ACAD11A0A0J9YXS1 232 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 ITGA4P13612 1032 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 MARSP56192 900 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 WDR72Q3MJ13 1102 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 CYP4A22Q5TCH4 519 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 CERKQ8TCT0 537 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 DDI1Q8WTU0 396 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 SNF8Q96H20 258 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 RAB23Q9ULC3 237 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 ESYT3A0FGR9 886 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 SMCO3A2RU48 225 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 GRXCR2A6NFK2 248 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 TAF4O00268 1085 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 SERPINB5P36952 375 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 NSUN6Q8TEA1 469 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 TRIM24O15164 1050 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 RPTNQ6XPR3 784 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 SGF29Q96ES7 293 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 ZNF560Q96MR9 790 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 GRIN2AQ12879 1464 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 EPN2O95208 641 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 C4orf46Q504U0 113 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 C11orf57Q6ZUT1 292 aaPredicted RBP16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 PAGE5Q96GU1 130 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 KCNS3Q9BQ31 491 aa16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.46■□□□□ 0.23
CACNA1A-202ENST00000573710 TBKBP1A7MCY6 615 aa16.46■□□□□ 0.22
CACNA1A-202ENST00000573710 A8MX80 341 aa16.46■□□□□ 0.22
CACNA1A-202ENST00000573710 DOK6Q6PKX4 331 aa16.46■□□□□ 0.22
CACNA1A-202ENST00000573710 MTFMTQ96DP5 389 aaKnown RBP16.46■□□□□ 0.22
CACNA1A-202ENST00000573710 AIFM3Q96NN9 605 aa16.46■□□□□ 0.22
CACNA1A-202ENST00000573710 DSG1Q02413 1049 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 CATSPER1Q8NEC5 780 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 TSPAN17Q96FV3 270 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 MCEEQ96PE7 176 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 FBXO40Q9UH90 709 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 SYCP2Q9BX26 1530 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 ERVV-2B6SEH9 535 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 TRAF2Q12933 501 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 ALCAMQ13740 583 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 TDRD10Q5VZ19 366 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 ANKFN1Q8N957 763 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 MRGBPQ9NV56 204 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 POLR3AO14802 1390 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 ATP1A4Q13733 1029 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 DRAP1Q14919 205 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 FOXP3Q9BZS1 431 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 TLR7Q9NYK1 1049 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 LYVE1Q9Y5Y7 322 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 ARHGDIBP52566 201 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 C12orf60Q5U649 245 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 APOBEC3FQ8IUX4 373 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 ZNF512BQ96KM6 892 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 PACSIN1Q9BY11 444 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 MBL2P11226 248 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 TFE3P19532 575 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 MARK2Q7KZI7 788 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 LXNQ9BS40 222 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 MARK1Q9P0L2 795 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 CKBP12277 381 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 TMEM132DQ14C87 1099 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 FOXP4Q8IVH2 680 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 FAM96AQ9H5X1 160 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 MCUBQ9NWR8 336 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 ZSWIM5Q9P217 1185 aa16.45■□□□□ 0.22
CACNA1A-202ENST00000573710 BTN3A3O00478 584 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 HSPA9P38646 679 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 STARP49675 285 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 EIF2B2P49770 351 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 PCYOX1LQ8NBM8 494 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 FAM172AQ8WUF8 416 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 MIEF1Q9NQG6 463 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 LOC100653049A0A140TA62 436 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 MGAT4DA6NG13 374 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 CCDC22O60826 627 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 PSIP1O75475 530 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 KRT34O76011 436 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 KCNH2Q12809 1159 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 MTMR2Q13614 643 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 IER5Q5VY09 327 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 ZNF671Q8TAW3 534 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 CHST12Q9NRB3 414 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 AKAP7Q9P0M2 348 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 ZC3H11AO75152 810 aaKnown RBP eCLIP16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 S100A1P23297 94 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 CDC73Q6P1J9 531 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 TRPM5Q9NZQ8 1165 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 ZNF23P17027 643 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 CACNA2D1P54289 1103 aa16.44■□□□□ 0.22
CACNA1A-202ENST00000573710 HMGCS2P54868 508 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms