RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 KIAA0408Q6ZU52 694 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 CLNKQ7Z7G1 428 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 TMPRSS6Q8IU80 811 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 ADGRG5Q8IZF4 528 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 CACNA2D3Q8IZS8 1091 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 IPO4Q8TEX9 1081 aaKnown RBP6.17□□□□□ -1.42
SYNE2-210ENST00000553455 LOXL4Q96JB6 756 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 SLC46A2Q9BY10 475 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 CXorf36Q9H7Y0 433 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 AGO4Q9HCK5 861 aaKnown RBP6.17□□□□□ -1.42
SYNE2-210ENST00000553455 OBP2BQ9NPH6 170 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 RNF181Q9P0P0 153 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 LUZP4Q9P127 313 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 IGSF9Q9P2J2 1179 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 NEU2Q9Y3R4 380 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 CDY1Q9Y6F8 540 aa6.17□□□□□ -1.42
SYNE2-210ENST00000553455 LGALS16A8MUM7 142 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 hCG_1984214I3L0E3 225 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 ERN1O75460 977 aaKnown RBP6.16□□□□□ -1.42
SYNE2-210ENST00000553455 SOAT2O75908 522 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 NCR1O76036 304 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 RECQL4O94761 1208 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 INMTO95050 263 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 VEGFAP15692 232 aaPredicted RBP6.16□□□□□ -1.42
SYNE2-210ENST00000553455 KCNA3P22001 575 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 LRPAP1P30533 357 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 DGKEP52429 567 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 KRT17Q04695 432 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 MYO1EQ12965 1108 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 DYRK1AQ13627 763 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 PDCD2Q16342 344 aaPredicted RBP6.16□□□□□ -1.42
SYNE2-210ENST00000553455 CYP2A13Q16696 494 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 PFKFB4Q16877 469 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 GEN1Q17RS7 908 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 INSCQ1MX18 579 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 ZACNQ401N2 412 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 CD300EQ496F6 205 aaPredicted RBP6.16□□□□□ -1.42
SYNE2-210ENST00000553455 FBXO38Q6PIJ6 1188 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 CRTC1Q6UUV9 634 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 USP49Q70CQ1 688 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 MYCT1Q8N699 235 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 TTC9BQ8N6N2 239 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 BPIFB1Q8TDL5 484 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 RMDN3Q96TC7 470 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 KRTAP4-12Q9BQ66 201 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 KRTAP9-9Q9BYP9 154 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 KRTAP9-4Q9BYQ2 154 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 NECTIN3Q9NQS3 549 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 ZSCAN32Q9NX65 697 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 MRPS17Q9Y2R5 130 aaKnown RBP6.16□□□□□ -1.42
SYNE2-210ENST00000553455 MAP3K2Q9Y2U5 619 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 MTO1Q9Y2Z2 717 aaKnown RBP6.16□□□□□ -1.42
SYNE2-210ENST00000553455 TCAF1Q9Y4C2 921 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 PCDHGB3Q9Y5G1 929 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 SPATA31A3Q5VYP0 1347 aa6.16□□□□□ -1.42
SYNE2-210ENST00000553455 KRTAP4-8A0A0G2JLE6 195 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 hCG_1642624A0A1W2PR95 340 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 AQP12BA6NM10 295 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 SYT5O00445 386 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 FAM20BO75063 409 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 TPH1P17752 444 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 EGR1P18146 543 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 ITGALP20701 1170 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 NR4A1P22736 598 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 NDUFV1P49821 464 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 RAPGEF1Q13905 1077 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 KCNAB1Q14722 419 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 NFIXQ14938 502 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 PRKD1Q15139 912 aaPredicted RBP6.15□□□□□ -1.42
SYNE2-210ENST00000553455 ZNF750Q32MQ0 723 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 BEAN1Q3B7T3 259 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 LAYNQ6UX15 382 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 LDHAL6AQ6ZMR3 332 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 TTLL10Q6ZVT0 673 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 FAM9AQ8IZU1 332 aaPredicted RBP6.15□□□□□ -1.42
SYNE2-210ENST00000553455 FAM109AQ8N4B1 249 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.15□□□□□ -1.42
SYNE2-210ENST00000553455 TMEM125Q96AQ2 219 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 EVI5LQ96CN4 794 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 SNX27Q96L92 541 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 ADAM2Q99965 735 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 PTDSS2Q9BVG9 487 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.15□□□□□ -1.42
SYNE2-210ENST00000553455 DEF6Q9H4E7 631 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 AKIP1Q9NQ31 210 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 CEP72Q9P209 647 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 GRHPRQ9UBQ7 328 aa6.15□□□□□ -1.42
SYNE2-210ENST00000553455 NDRG4Q9ULP0 352 aaKnown RBP6.15□□□□□ -1.42
SYNE2-210ENST00000553455 GAGE12BA1L429 117 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 GAGE12HA6NDE8 117 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 BTBD11A6QL63 1104 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 RNASET2O00584 256 aaKnown RBP6.14□□□□□ -1.43
SYNE2-210ENST00000553455 ACKR2O00590 384 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 PLSCR1O15162 318 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 TLR5O60602 858 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 CSF1RP07333 972 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 PPIFP30405 207 aaKnown RBP6.14□□□□□ -1.43
SYNE2-210ENST00000553455 NPTX2P47972 431 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 ITGA8P53708 1063 aa6.14□□□□□ -1.43
SYNE2-210ENST00000553455 RPS7P62081 194 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms