RNA–Protein interactions for RNA: ENST00000553409.5

NRDE2-202, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 3,434 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-202ENST00000553409 DLG1Q12959 904 aa11.9□□□□□ -0.5
NRDE2-202ENST00000553409 MSLNQ13421 630 aaPredicted RBP11.9□□□□□ -0.5
NRDE2-202ENST00000553409 KLHL38Q2WGJ6 581 aa11.9□□□□□ -0.5
NRDE2-202ENST00000553409 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.9□□□□□ -0.5
NRDE2-202ENST00000553409 PRPF39Q86UA1 669 aaKnown RBP11.9□□□□□ -0.5
NRDE2-202ENST00000553409 DNAJC1Q96KC8 554 aaKnown RBP11.9□□□□□ -0.5
NRDE2-202ENST00000553409 MECRQ9BV79 373 aa11.9□□□□□ -0.5
NRDE2-202ENST00000553409 FARP1Q9Y4F1 1045 aaPredicted RBP11.9□□□□□ -0.5
NRDE2-202ENST00000553409 NFASCO94856 1347 aa11.9□□□□□ -0.51
NRDE2-202ENST00000553409 SMCHD1A6NHR9 2005 aa11.9□□□□□ -0.51
NRDE2-202ENST00000553409 HLA-DOAP06340 250 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 ITGA2BP08514 1039 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 VCPP55072 806 aaKnown RBP11.89□□□□□ -0.51
NRDE2-202ENST00000553409 ALCAMQ13740 583 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 ARID3BQ8IVW6 561 aaPredicted RBP11.89□□□□□ -0.51
NRDE2-202ENST00000553409 PALM2Q8IXS6 379 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.89□□□□□ -0.51
NRDE2-202ENST00000553409 TMEM174Q8WUU8 243 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 TRIM11Q96F44 468 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 ZNF577Q9BSK1 485 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 GPAMQ9HCL2 828 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 GINM1Q9NU53 330 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 MARCOQ9UEW3 520 aaPredicted RBP11.89□□□□□ -0.51
NRDE2-202ENST00000553409 TAGLN3Q9UI15 199 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 GGA1Q9UJY5 639 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 POLIQ9UNA4 740 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 MEI4A8MW99 385 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 KRT1P04264 644 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 KITP10721 976 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 SCNN1DP51172 638 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 AQP4P55087 323 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 BPIFB4P59827 614 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 FAAP100Q0VG06 881 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 MAP7Q14244 749 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 CDHR3Q6ZTQ4 885 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 DHDDSQ86SQ9 333 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 FAM172AQ8WUF8 416 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 CPT1BQ92523 772 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 APOPT1Q96IL0 206 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 CCDC17Q96LX7 622 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 PCDH9Q9HC56 1237 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 S100A14Q9HCY8 104 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 GPRC5CQ9NQ84 441 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 RHBDL2Q9NX52 303 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 ZDHHC7Q9NXF8 308 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 KCNK4Q9NYG8 393 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 SAE1Q9UBE0 346 aaPredicted RBP11.89□□□□□ -0.51
NRDE2-202ENST00000553409 DRG1Q9Y295 367 aaKnown RBP11.89□□□□□ -0.51
NRDE2-202ENST00000553409 SNCAIPQ9Y6H5 919 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 IVNS1ABPQ9Y6Y0 642 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 TCRBV7S3A2A0A539 114 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 PRR5-ARHGAP8B1AHC4 643 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 PGM3O95394 542 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 NDUFB10O96000 172 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 VCLP18206 1134 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 ALDH18A1P54886 795 aaKnown RBP11.89□□□□□ -0.51
NRDE2-202ENST00000553409 RPL7AP62424 266 aaKnown RBP11.89□□□□□ -0.51
NRDE2-202ENST00000553409 ARHGAP8P85298 464 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 PDE1BQ01064 536 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 ASPHQ12797 758 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 R3HDM1Q15032 1099 aaKnown RBP11.89□□□□□ -0.51
NRDE2-202ENST00000553409 BBS9Q3SYG4 887 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 TXNRD3NBQ6F5E7 133 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 SH2D5Q6ZV89 423 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 RBM12BQ8IXT5 1001 aaKnown RBP11.89□□□□□ -0.51
NRDE2-202ENST00000553409 RCOR2Q8IZ40 523 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 PKD2L1Q9P0L9 805 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 NYAP2Q9P242 653 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 PCDHB2Q9Y5E7 798 aa11.89□□□□□ -0.51
NRDE2-202ENST00000553409 COL24A1Q17RW2 1714 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 STK10O94804 968 aaKnown RBP11.88□□□□□ -0.51
NRDE2-202ENST00000553409 UQCRBP14927 111 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 GDF10P55107 478 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 PEX3P56589 373 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 GTF2BQ00403 316 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 PTK7Q13308 1070 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 DNAL1Q4LDG9 190 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 CEP55Q53EZ4 464 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 LIN9Q5TKA1 542 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 CES4AQ5XG92 561 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 CIAPIN1Q6FI81 312 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 AMIGO3Q86WK7 504 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 LENG1Q96BZ8 264 aaPredicted RBP11.88□□□□□ -0.51
NRDE2-202ENST00000553409 PLEKHG4BQ96PX9 1271 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 POLLQ9UGP5 575 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 ADAMTS6Q9UKP5 1117 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 A0A088AWK7 358 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 TMEM150BA6NC51 233 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 FKBP6O75344 327 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 STIP1P31948 543 aaKnown RBP11.88□□□□□ -0.51
NRDE2-202ENST00000553409 BST1Q10588 318 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 GRM2Q14416 872 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 CCDC174Q6PII3 467 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 ACAP3Q96P50 834 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 WDR11Q9BZH6 1224 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 PFDN1O60925 122 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 MAPTP10636 758 aaKnown RBP11.88□□□□□ -0.51
NRDE2-202ENST00000553409 ATP2B4P23634 1241 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 PEX2P28328 305 aa11.88□□□□□ -0.51
NRDE2-202ENST00000553409 HIRAP54198 1017 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms