RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 NOD2Q9HC29 1040 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 CNTNAP2Q9UHC6 1331 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 LOC102724159A0A0B4J2E5 919 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 C19orf81C9J6K1 198 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 ASS1P00966 412 aaKnown RBP14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 ADRA1DP25100 572 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 NEDD9Q14511 834 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 PWP2Q15269 919 aaKnown RBP14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 MSS51Q4VC12 460 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 PPM1NQ8N819 430 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 MTMR14Q8NCE2 650 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 N4BP2L2Q92802 583 aaPredicted RBP14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 CYTH4Q9UIA0 394 aa14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 XPO7Q9UIA9 1087 aaKnown RBP14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 MAFBQ9Y5Q3 323 aaPredicted RBP14.36□□□□□ -0.11
PRPF40B-209ENST00000548825 HCRTO43612 131 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 FAM155BO75949 473 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 CPP00450 1065 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 PDGFRAP16234 1089 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 NUMBP49757 651 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 ELF3P78545 371 aaPredicted RBP14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 PLCB4Q15147 1175 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 PLEKHA7Q6IQ23 1121 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 ZNF677Q86XU0 584 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 BRSK2Q8IWQ3 736 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 REPS2Q8NFH8 660 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 MAGEB5Q9BZ81 275 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 TXNRD2Q9NNW7 524 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 UBN1Q9NPG3 1134 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 ZC3H11AO75152 810 aaKnown RBP eCLIP14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 APRTP07741 180 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 ARL2P36404 184 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 MSH2P43246 934 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 WDR4P57081 412 aaKnown RBP14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 SLC1A5Q15758 541 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 FNBP1LQ5T0N5 605 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 JADE1Q6IE81 842 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 CROCCP2Q86T23 111 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 KATNAL2Q8IYT4 538 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 KIAA0319LQ8IZA0 1049 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 WDTC1Q8N5D0 677 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 ZBED3Q96IU2 234 aaPredicted RBP14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 ROPN1BQ9BZX4 212 aaPredicted RBP14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 IQCGQ9H095 443 aaKnown RBP14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 ROPN1Q9HAT0 212 aaPredicted RBP14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 PDLIM7Q9NR12 457 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 RAB6BQ9NRW1 208 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 SNX9Q9Y5X1 595 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 MYH9P35579 1960 aaKnown RBP14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 MYO18AQ92614 2054 aaKnown RBP14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 LACTBL1A8MY62 500 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 DNALI1O14645 258 aaPredicted RBP14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 UPP2O95045 317 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 MIPP30301 263 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 TRIM72Q6ZMU5 477 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 C15orf39Q6ZRI6 1047 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 SCUBE3Q8IX30 993 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 DCPSQ96C86 337 aaKnown RBP14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 FAF2Q96CS3 445 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 ACO2Q99798 780 aaKnown RBP14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 B3GNT5Q9BYG0 378 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 MAP3K20Q9NYL2 800 aaKnown RBP14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 SEPT10Q9P0V9 454 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 PHTF1Q9UMS5 762 aa14.35□□□□□ -0.11
PRPF40B-209ENST00000548825 GPR25O00155 361 aa14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 MCF2LO15068 1137 aa14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 F7P08709 466 aaPredicted RBP14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 KRT16P08779 473 aa14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 CPA2P48052 419 aa14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 C1QBPQ07021 282 aaKnown RBP14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 KLF1Q13351 362 aaPredicted RBP14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 KIZQ2M2Z5 673 aa14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 ACOT1Q86TX2 421 aa14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 FAM149B1Q96BN6 582 aa14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 KLK14Q9P0G3 267 aa14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 KCNN4O15554 427 aa14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 MSCO60682 206 aa14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 LRCH4O75427 683 aa14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 ERBB2P04626 1255 aa14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 STAG3L1P0CL83 205 aa14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 ADORA2BP29275 332 aa14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 VCPP55072 806 aaKnown RBP14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 BMPR2Q13873 1038 aa14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 STAT4Q14765 748 aa14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 YTHDF3Q7Z739 585 aaKnown RBP14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 PDIK1LQ8N165 341 aa14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 ARL2BPQ9Y2Y0 163 aa14.34□□□□□ -0.11
PRPF40B-209ENST00000548825 hCG_1818297A0A087WSY0 165 aa14.33□□□□□ -0.11
PRPF40B-209ENST00000548825 CCDC78A2IDD5 438 aa14.33□□□□□ -0.11
PRPF40B-209ENST00000548825 PAEPP09466 180 aa14.33□□□□□ -0.11
PRPF40B-209ENST00000548825 IQCF3P0C7M6 154 aa14.33□□□□□ -0.11
PRPF40B-209ENST00000548825 SPARCL1Q14515 664 aa14.33□□□□□ -0.11
PRPF40B-209ENST00000548825 RHBDF2Q6PJF5 856 aa14.33□□□□□ -0.11
PRPF40B-209ENST00000548825 CCDC91Q7Z6B0 441 aa14.33□□□□□ -0.11
PRPF40B-209ENST00000548825 BBOF1Q8ND07 529 aa14.33□□□□□ -0.11
PRPF40B-209ENST00000548825 OR6B3Q8NGW1 331 aa14.33□□□□□ -0.11
PRPF40B-209ENST00000548825 KIF12Q96FN5 646 aa14.33□□□□□ -0.11
PRPF40B-209ENST00000548825 FAM167BQ9BTA0 163 aa14.33□□□□□ -0.11
PRPF40B-209ENST00000548825 CFAP69A5D8W1 941 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms