RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 TOR1BO14657 336 aa7.53□□□□□ -1.2
LEMD3-206ENST00000545026 NPC1O15118 1278 aa7.53□□□□□ -1.2
LEMD3-206ENST00000545026 RRP9O43818 475 aaKnown RBP7.53□□□□□ -1.2
LEMD3-206ENST00000545026 PRAMEF10O60809 474 aa7.53□□□□□ -1.2
LEMD3-206ENST00000545026 SOAT2O75908 522 aa7.53□□□□□ -1.2
LEMD3-206ENST00000545026 FGAP02671 866 aa7.53□□□□□ -1.2
LEMD3-206ENST00000545026 CFIP05156 583 aa7.53□□□□□ -1.2
LEMD3-206ENST00000545026 LRPAP1P30533 357 aa7.53□□□□□ -1.2
LEMD3-206ENST00000545026 GRM1Q13255 1194 aa7.53□□□□□ -1.2
LEMD3-206ENST00000545026 DYRK1AQ13627 763 aa7.53□□□□□ -1.2
LEMD3-206ENST00000545026 LAYNQ6UX15 382 aa7.53□□□□□ -1.2
LEMD3-206ENST00000545026 TMEM108Q6UXF1 575 aa7.53□□□□□ -1.2
LEMD3-206ENST00000545026 USP49Q70CQ1 688 aa7.53□□□□□ -1.2
LEMD3-206ENST00000545026 CLNKQ7Z7G1 428 aa7.53□□□□□ -1.2
LEMD3-206ENST00000545026 TMEM132CQ8N3T6 1108 aa7.53□□□□□ -1.2
LEMD3-206ENST00000545026 CPT1CQ8TCG5 803 aa7.53□□□□□ -1.2
LEMD3-206ENST00000545026 IPO4Q8TEX9 1081 aaKnown RBP7.53□□□□□ -1.2
LEMD3-206ENST00000545026 RMDN3Q96TC7 470 aa7.53□□□□□ -1.2
LEMD3-206ENST00000545026 RNF181Q9P0P0 153 aa7.53□□□□□ -1.2
LEMD3-206ENST00000545026 IGSF9Q9P2J2 1179 aa7.53□□□□□ -1.2
LEMD3-206ENST00000545026 CDY1Q9Y6F8 540 aa7.53□□□□□ -1.2
LEMD3-206ENST00000545026 SPATA31A3Q5VYP0 1347 aa7.52□□□□□ -1.2
LEMD3-206ENST00000545026 MARCH11A6NNE9 402 aa7.52□□□□□ -1.21
LEMD3-206ENST00000545026 LGALS16A8MUM7 142 aa7.52□□□□□ -1.21
LEMD3-206ENST00000545026 hCG_1984214I3L0E3 225 aa7.52□□□□□ -1.21
LEMD3-206ENST00000545026 TLR5O60602 858 aa7.52□□□□□ -1.21
LEMD3-206ENST00000545026 ERN1O75460 977 aaKnown RBP7.52□□□□□ -1.21
LEMD3-206ENST00000545026 RECQL4O94761 1208 aa7.52□□□□□ -1.21
LEMD3-206ENST00000545026 TPH1P17752 444 aa7.52□□□□□ -1.21
LEMD3-206ENST00000545026 HOXA5P20719 270 aa7.52□□□□□ -1.21
LEMD3-206ENST00000545026 DGKEP52429 567 aa7.52□□□□□ -1.21
LEMD3-206ENST00000545026 FAM189BP81408 668 aa7.52□□□□□ -1.21
LEMD3-206ENST00000545026 KRT17Q04695 432 aa7.52□□□□□ -1.21
LEMD3-206ENST00000545026 MYO1EQ12965 1108 aa7.52□□□□□ -1.21
LEMD3-206ENST00000545026 TOB2Q14106 344 aaPredicted RBP7.52□□□□□ -1.21
LEMD3-206ENST00000545026 SPARCL1Q14515 664 aa7.52□□□□□ -1.21
LEMD3-206ENST00000545026 HSP90AB4PQ58FF6 505 aa7.52□□□□□ -1.21
LEMD3-206ENST00000545026 RABL3Q5HYI8 236 aa7.52□□□□□ -1.21
LEMD3-206ENST00000545026 USP17L6PQ6QN14 398 aa7.52□□□□□ -1.21
LEMD3-206ENST00000545026 CRTC1Q6UUV9 634 aa7.52□□□□□ -1.21
LEMD3-206ENST00000545026 LDHAL6AQ6ZMR3 332 aa7.52□□□□□ -1.21
LEMD3-206ENST00000545026 BPIFB1Q8TDL5 484 aa7.52□□□□□ -1.21
LEMD3-206ENST00000545026 NELL2Q99435 816 aa7.52□□□□□ -1.21
LEMD3-206ENST00000545026 PTDSS2Q9BVG9 487 aa7.52□□□□□ -1.21
LEMD3-206ENST00000545026 SLC46A2Q9BY10 475 aa7.52□□□□□ -1.21
LEMD3-206ENST00000545026 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.52□□□□□ -1.21
LEMD3-206ENST00000545026 FAM83DQ9H4H8 585 aa7.52□□□□□ -1.21
LEMD3-206ENST00000545026 ZNF768Q9H5H4 540 aaKnown RBP7.52□□□□□ -1.21
LEMD3-206ENST00000545026 MRPS17Q9Y2R5 130 aaKnown RBP7.52□□□□□ -1.21
LEMD3-206ENST00000545026 MTO1Q9Y2Z2 717 aaKnown RBP7.52□□□□□ -1.21
LEMD3-206ENST00000545026 ITGALP20701 1170 aa7.51□□□□□ -1.21
LEMD3-206ENST00000545026 KCNA3P22001 575 aa7.51□□□□□ -1.21
LEMD3-206ENST00000545026 ACRV1P26436 265 aa7.51□□□□□ -1.21
LEMD3-206ENST00000545026 CXADRP78310 365 aa7.51□□□□□ -1.21
LEMD3-206ENST00000545026 SATB1Q01826 763 aa7.51□□□□□ -1.21
LEMD3-206ENST00000545026 FSTL1Q12841 308 aa7.51□□□□□ -1.21
LEMD3-206ENST00000545026 KCNAB1Q14722 419 aa7.51□□□□□ -1.21
LEMD3-206ENST00000545026 ZNF750Q32MQ0 723 aa7.51□□□□□ -1.21
LEMD3-206ENST00000545026 ADGRG5Q8IZF4 528 aa7.51□□□□□ -1.21
LEMD3-206ENST00000545026 CPXCR1Q8N123 301 aa7.51□□□□□ -1.21
LEMD3-206ENST00000545026 ATG16L2Q8NAA4 619 aa7.51□□□□□ -1.21
LEMD3-206ENST00000545026 PPP2R3CQ969Q6 453 aa7.51□□□□□ -1.21
LEMD3-206ENST00000545026 NACC2Q96BF6 587 aa7.51□□□□□ -1.21
LEMD3-206ENST00000545026 SCLT1Q96NL6 688 aa7.51□□□□□ -1.21
LEMD3-206ENST00000545026 ISCA1Q9BUE6 129 aa7.51□□□□□ -1.21
LEMD3-206ENST00000545026 MYLK2Q9H1R3 596 aa7.51□□□□□ -1.21
LEMD3-206ENST00000545026 DEF6Q9H4E7 631 aa7.51□□□□□ -1.21
LEMD3-206ENST00000545026 CXorf36Q9H7Y0 433 aa7.51□□□□□ -1.21
LEMD3-206ENST00000545026 TMEM8AQ9HCN3 771 aa7.51□□□□□ -1.21
LEMD3-206ENST00000545026 GRHPRQ9UBQ7 328 aa7.51□□□□□ -1.21
LEMD3-206ENST00000545026 GAGE12BA1L429 117 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 GAGE12HA6NDE8 117 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 AQP7P3A6NL99 342 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 AQP12BA6NM10 295 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 SYT5O00445 386 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 VEGFAP15692 232 aaPredicted RBP7.5□□□□□ -1.21
LEMD3-206ENST00000545026 EGR1P18146 543 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 SERPINF1P36955 418 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 PPM1FP49593 454 aaPredicted RBP7.5□□□□□ -1.21
LEMD3-206ENST00000545026 NDUFV1P49821 464 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 SELENOPP49908 381 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 RENBPP51606 427 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 ITGA8P53708 1063 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 RPS7P62081 194 aaKnown RBP7.5□□□□□ -1.21
LEMD3-206ENST00000545026 JAG1P78504 1218 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 PTK2BQ14289 1009 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 HLXQ14774 488 aaPredicted RBP7.5□□□□□ -1.21
LEMD3-206ENST00000545026 CYP2A13Q16696 494 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 CD300EQ496F6 205 aaPredicted RBP7.5□□□□□ -1.21
LEMD3-206ENST00000545026 CACHD1Q5VU97 1274 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 RAP1GAP2Q684P5 730 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 TMPRSS6Q8IU80 811 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 SMAP1Q8IYB5 467 aaPredicted RBP7.5□□□□□ -1.21
LEMD3-206ENST00000545026 FAM9AQ8IZU1 332 aaPredicted RBP7.5□□□□□ -1.21
LEMD3-206ENST00000545026 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.5□□□□□ -1.21
LEMD3-206ENST00000545026 SMCR8Q8TEV9 937 aaPredicted RBP7.5□□□□□ -1.21
LEMD3-206ENST00000545026 BOD1Q96IK1 185 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 BDH2Q9BUT1 245 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 PCDHAC1Q9H158 963 aa7.5□□□□□ -1.21
LEMD3-206ENST00000545026 MAGEH1Q9H213 219 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms