RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 TSHZ1Q6ZSZ6 1077 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 USP49Q70CQ1 688 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 RSPH3Q86UC2 560 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 TSPYL5Q86VY4 417 aaPredicted RBP2.56□□□□□ -2
TRAV1-1-201ENST00000542354 MAPKAPK5Q8IW41 473 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 MRPL41Q8IXM3 137 aaKnown RBP2.56□□□□□ -2
TRAV1-1-201ENST00000542354 SLC39A11Q8N1S5 342 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 PRPF38AQ8NAV1 312 aaKnown RBP2.56□□□□□ -2
TRAV1-1-201ENST00000542354 ENOX1Q8TC92 643 aaKnown RBP2.56□□□□□ -2
TRAV1-1-201ENST00000542354 CSGALNACT1Q8TDX6 532 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 TGFBRAP1Q8WUH2 860 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 COPS5Q92905 334 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 ELSPBP1Q96BH3 223 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 ZNF707Q96C28 371 aaPredicted RBP2.56□□□□□ -2
TRAV1-1-201ENST00000542354 MPHOSPH6Q99547 160 aaKnown RBP2.56□□□□□ -2
TRAV1-1-201ENST00000542354 SLF1Q9BQI6 1058 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.56□□□□□ -2
TRAV1-1-201ENST00000542354 ASPNQ9BXN1 380 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 PLA2G2FQ9BZM2 168 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 ZDHHC5Q9C0B5 715 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 ZBP1Q9H171 429 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 TMPRSS5Q9H3S3 457 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 PLEKHA4Q9H4M7 779 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 PHAXQ9H814 394 aaKnown RBP2.56□□□□□ -2
TRAV1-1-201ENST00000542354 ACAD9Q9H845 621 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 ATP6V0A4Q9HBG4 840 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 RAVER2Q9HCJ3 691 aaKnown RBP2.56□□□□□ -2
TRAV1-1-201ENST00000542354 CASS4Q9NQ75 786 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 A1CFQ9NQ94 594 aaKnown RBP2.56□□□□□ -2
TRAV1-1-201ENST00000542354 STK39Q9UEW8 545 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 SAP30BPQ9UHR5 308 aaKnown RBP2.56□□□□□ -2
TRAV1-1-201ENST00000542354 SERPINB13Q9UIV8 391 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 DCTN4Q9UJW0 460 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 NUDCQ9Y266 331 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 MYRFQ9Y2G1 1151 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 MAP3K2Q9Y2U5 619 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 PCDHGA1Q9Y5H4 931 aa2.56□□□□□ -2
TRAV1-1-201ENST00000542354 DDX49Q9Y6V7 483 aaKnown RBP2.56□□□□□ -2
TRAV1-1-201ENST00000542354 NSD1Q96L73 2696 aaPredicted RBP2.56□□□□□ -2
TRAV1-1-201ENST00000542354 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 PNMA6FA0A0J9YX94 578 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 ZNF263O14978 683 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 N4BP3O15049 544 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 SPRY1O43609 319 aaPredicted RBP2.55□□□□□ -2
TRAV1-1-201ENST00000542354 PPFIA4O75335 1185 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 BPNT1O95861 308 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 C1RP00736 705 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 MPOP05164 745 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 PGRP06401 933 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 KRT7P08729 469 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 HOXB7P09629 217 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 HNRNPA1P09651 372 aaKnown RBP eCLIP2.55□□□□□ -2
TRAV1-1-201ENST00000542354 C1SP09871 688 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 ZGLP1P0C6A0 271 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 ZNF883P0CG24 379 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 PRKCSHP14314 528 aaPredicted RBP2.55□□□□□ -2
TRAV1-1-201ENST00000542354 BCKDHBP21953 392 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 GDI1P31150 447 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 CD52P31358 61 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 GUCY1A2P33402 732 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 PBX3P40426 434 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 PTGER3P43115 390 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 KIR2DL1P43626 348 aaPredicted RBP2.55□□□□□ -2
TRAV1-1-201ENST00000542354 KIR2DL2P43627 348 aaPredicted RBP2.55□□□□□ -2
TRAV1-1-201ENST00000542354 UQCRFS1P47985 274 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 OAZ1P54368 228 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 RNF4P78317 190 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 SRSF3P84103 164 aaKnown RBP2.55□□□□□ -2
TRAV1-1-201ENST00000542354 FOXO4P98177 505 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 MECOMQ03112 1051 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 PLP2Q04941 152 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 LAPTM5Q13571 262 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 GRM4Q14833 912 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 PUM3Q15397 648 aaKnown RBP2.55□□□□□ -2
TRAV1-1-201ENST00000542354 ENOX2Q16206 610 aaKnown RBP2.55□□□□□ -2
TRAV1-1-201ENST00000542354 CWF19L2Q2TBE0 894 aaKnown RBP2.55□□□□□ -2
TRAV1-1-201ENST00000542354 GAB4Q2WGN9 574 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 PDLIM3Q53GG5 364 aaPredicted RBP2.55□□□□□ -2
TRAV1-1-201ENST00000542354 FBXO47Q5MNV8 452 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 TANGO2Q6ICL3 276 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 LRFN4Q6PJG9 635 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 KSR2Q6VAB6 950 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 SLC24A5Q71RS6 500 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 ERICH6Q7L0X2 663 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 CHST3Q7LGC8 479 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 GRASPQ7Z6J2 395 aaPredicted RBP2.55□□□□□ -2
TRAV1-1-201ENST00000542354 RALGPS2Q86X27 583 aaPredicted RBP2.55□□□□□ -2
TRAV1-1-201ENST00000542354 PHC2Q8IXK0 858 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 LRRC43Q8N309 656 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 SH3RF3Q8TEJ3 882 aaPredicted RBP2.55□□□□□ -2
TRAV1-1-201ENST00000542354 USP33Q8TEY7 942 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 RNF141Q8WVD5 230 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 LINC01599Q8WXQ3 324 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 NDRG1Q92597 394 aaKnown RBP2.55□□□□□ -2
TRAV1-1-201ENST00000542354 OSBP2Q969R2 916 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 SGF29Q96ES7 293 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 PLPPR2Q96GM1 343 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 C20orf173Q96LM9 149 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 SLITRK1Q96PX8 696 aa2.55□□□□□ -2
TRAV1-1-201ENST00000542354 CCNL2Q96S94 520 aaPredicted RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms