RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 WASF3Q9UPY6 502 aa22.67■■□□□ 1.22
CHKA-206ENST00000531341 OBSL1O75147 1896 aa22.66■■□□□ 1.22
CHKA-206ENST00000531341 LNP1A1A4G5 178 aa22.66■■□□□ 1.22
CHKA-206ENST00000531341 RHOBTB1O94844 696 aa22.66■■□□□ 1.22
CHKA-206ENST00000531341 PLCG1P19174 1290 aa22.66■■□□□ 1.22
CHKA-206ENST00000531341 NOVA1P51513 510 aaKnown RBP22.66■■□□□ 1.22
CHKA-206ENST00000531341 DGKEP52429 567 aa22.66■■□□□ 1.22
CHKA-206ENST00000531341 FAM160A1Q05DH4 1040 aa22.66■■□□□ 1.22
CHKA-206ENST00000531341 KARSQ15046 597 aaKnown RBP22.66■■□□□ 1.22
CHKA-206ENST00000531341 ELF2Q15723 593 aa22.66■■□□□ 1.22
CHKA-206ENST00000531341 EML3Q32P44 896 aa22.66■■□□□ 1.22
CHKA-206ENST00000531341 SV2CQ496J9 727 aa22.66■■□□□ 1.22
CHKA-206ENST00000531341 CPA6Q8N4T0 437 aa22.66■■□□□ 1.22
CHKA-206ENST00000531341 RAD54LQ92698 747 aa22.66■■□□□ 1.22
CHKA-206ENST00000531341 PKMYT1Q99640 499 aa22.66■■□□□ 1.22
CHKA-206ENST00000531341 TPSD1Q9BZJ3 242 aa22.66■■□□□ 1.22
CHKA-206ENST00000531341 L1RE1Q9UN81 338 aa22.66■■□□□ 1.22
CHKA-206ENST00000531341 SOBPA7XYQ1 873 aa22.65■■□□□ 1.22
CHKA-206ENST00000531341 PATE3B3GLJ2 98 aa22.65■■□□□ 1.22
CHKA-206ENST00000531341 NOL4O94818 638 aa22.65■■□□□ 1.22
CHKA-206ENST00000531341 SCP2P22307 547 aa22.65■■□□□ 1.22
CHKA-206ENST00000531341 OSTM1Q86WC4 334 aa22.65■■□□□ 1.22
CHKA-206ENST00000531341 DDX43Q9NXZ2 648 aaKnown RBP22.65■■□□□ 1.22
CHKA-206ENST00000531341 GTF3C4Q9UKN8 822 aa22.65■■□□□ 1.22
CHKA-206ENST00000531341 ZMIZ1Q9ULJ6 1067 aa22.65■■□□□ 1.22
CHKA-206ENST00000531341 CACNA1GO43497 2377 aa22.65■■□□□ 1.22
CHKA-206ENST00000531341 C2orf78A6NCI8 922 aa22.64■■□□□ 1.21
CHKA-206ENST00000531341 TULP1O00294 542 aaPredicted RBP22.64■■□□□ 1.21
CHKA-206ENST00000531341 KRT18P05783 430 aaKnown RBP22.64■■□□□ 1.21
CHKA-206ENST00000531341 BCKDHBP21953 392 aa22.64■■□□□ 1.21
CHKA-206ENST00000531341 GBP1P32455 592 aa22.64■■□□□ 1.21
CHKA-206ENST00000531341 UBA7P41226 1012 aa22.64■■□□□ 1.21
CHKA-206ENST00000531341 ZXDBP98169 803 aa22.64■■□□□ 1.21
CHKA-206ENST00000531341 TSPY1Q01534 308 aa22.64■■□□□ 1.21
CHKA-206ENST00000531341 KCNA1Q09470 495 aa22.64■■□□□ 1.21
CHKA-206ENST00000531341 FOXC1Q12948 553 aa22.64■■□□□ 1.21
CHKA-206ENST00000531341 USP4Q13107 963 aa22.64■■□□□ 1.21
CHKA-206ENST00000531341 SH3PXD2AQ5TCZ1 1133 aa22.64■■□□□ 1.21
CHKA-206ENST00000531341 UNQ6494/PRO21346Q6UXR6 183 aa22.64■■□□□ 1.21
CHKA-206ENST00000531341 ARL14EPQ8N8R7 260 aaPredicted RBP22.64■■□□□ 1.21
CHKA-206ENST00000531341 CALML4Q96GE6 196 aa22.64■■□□□ 1.21
CHKA-206ENST00000531341 MYRFLQ96LU7 910 aa22.64■■□□□ 1.21
CHKA-206ENST00000531341 AK8Q96MA6 479 aa22.64■■□□□ 1.21
CHKA-206ENST00000531341 GCNT4Q9P109 453 aa22.64■■□□□ 1.21
CHKA-206ENST00000531341 DMXL2Q8TDJ6 3036 aa22.64■■□□□ 1.21
CHKA-206ENST00000531341 K7EQS6 105 aa22.63■■□□□ 1.21
CHKA-206ENST00000531341 CDX4O14627 284 aaPredicted RBP22.63■■□□□ 1.21
CHKA-206ENST00000531341 ITGB3P05106 788 aa22.63■■□□□ 1.21
CHKA-206ENST00000531341 POLR2BP30876 1174 aaKnown RBP22.63■■□□□ 1.21
CHKA-206ENST00000531341 SEC13P55735 322 aa22.63■■□□□ 1.21
CHKA-206ENST00000531341 ZNF252P-AS1Q0IIN9 211 aa22.63■■□□□ 1.21
CHKA-206ENST00000531341 NFE2Q16621 373 aaPredicted RBP22.63■■□□□ 1.21
CHKA-206ENST00000531341 PMS2CLQ68D20 193 aa22.63■■□□□ 1.21
CHKA-206ENST00000531341 SLFN12LQ6IEE8 588 aa22.63■■□□□ 1.21
CHKA-206ENST00000531341 C1orf127Q8N9H9 656 aa22.63■■□□□ 1.21
CHKA-206ENST00000531341 CXorf38Q8TB03 319 aa22.63■■□□□ 1.21
CHKA-206ENST00000531341 SH3RF2Q8TEC5 729 aa22.63■■□□□ 1.21
CHKA-206ENST00000531341 LEO1Q8WVC0 666 aaPredicted RBP22.63■■□□□ 1.21
CHKA-206ENST00000531341 TRMT2BQ96GJ1 504 aaKnown RBP22.63■■□□□ 1.21
CHKA-206ENST00000531341 ACBD6Q9BR61 282 aa22.63■■□□□ 1.21
CHKA-206ENST00000531341 TMEM121BQ9BXQ6 578 aaPredicted RBP22.63■■□□□ 1.21
CHKA-206ENST00000531341 ST6GALNAC4Q9H4F1 302 aa22.63■■□□□ 1.21
CHKA-206ENST00000531341 AGAP1Q9UPQ3 857 aa22.63■■□□□ 1.21
CHKA-206ENST00000531341 TCHHQ07283 1943 aa22.63■■□□□ 1.21
CHKA-206ENST00000531341 ZNF638Q14966 1978 aaKnown RBP22.62■■□□□ 1.21
CHKA-206ENST00000531341 TBCAO75347 108 aaKnown RBP22.62■■□□□ 1.21
CHKA-206ENST00000531341 CKMP06732 381 aa22.62■■□□□ 1.21
CHKA-206ENST00000531341 IFNAR2P48551 515 aa22.62■■□□□ 1.21
CHKA-206ENST00000531341 INTS6LQ5JSJ4 861 aaKnown RBP22.62■■□□□ 1.21
CHKA-206ENST00000531341 ZNF720Q7Z2F6 126 aa22.62■■□□□ 1.21
CHKA-206ENST00000531341 POMGNT1Q8WZA1 660 aa22.62■■□□□ 1.21
CHKA-206ENST00000531341 ATP2A3Q93084 1043 aa22.62■■□□□ 1.21
CHKA-206ENST00000531341 ACDQ96AP0 544 aa22.62■■□□□ 1.21
CHKA-206ENST00000531341 FAM213AQ9BRX8 229 aa22.62■■□□□ 1.21
CHKA-206ENST00000531341 TRAV19A0A0A6YYK7 116 aa22.61■■□□□ 1.21
CHKA-206ENST00000531341 SLC26A4O43511 780 aa22.61■■□□□ 1.21
CHKA-206ENST00000531341 USP17L7P0C7H9 530 aa22.61■■□□□ 1.21
CHKA-206ENST00000531341 HOXB3P14651 431 aaPredicted RBP22.61■■□□□ 1.21
CHKA-206ENST00000531341 OPRD1P41143 372 aa22.61■■□□□ 1.21
CHKA-206ENST00000531341 RPL10AP62906 217 aaKnown RBP22.61■■□□□ 1.21
CHKA-206ENST00000531341 TFAMQ00059 246 aaKnown RBP22.61■■□□□ 1.21
CHKA-206ENST00000531341 POU5F1Q01860 360 aaKnown RBP22.61■■□□□ 1.21
CHKA-206ENST00000531341 GAB4Q2WGN9 574 aa22.61■■□□□ 1.21
CHKA-206ENST00000531341 C2orf27AQ580R0 203 aa22.61■■□□□ 1.21
CHKA-206ENST00000531341 SFR1Q86XK3 245 aa22.61■■□□□ 1.21
CHKA-206ENST00000531341 SFTPA1Q8IWL2 248 aa22.61■■□□□ 1.21
CHKA-206ENST00000531341 TSTD1Q8NFU3 115 aa22.61■■□□□ 1.21
CHKA-206ENST00000531341 USP33Q8TEY7 942 aa22.61■■□□□ 1.21
CHKA-206ENST00000531341 SAAL1Q96ER3 474 aa22.61■■□□□ 1.21
CHKA-206ENST00000531341 ZNF560Q96MR9 790 aa22.61■■□□□ 1.21
CHKA-206ENST00000531341 STRA6Q9BX79 667 aa22.61■■□□□ 1.21
CHKA-206ENST00000531341 TMEM206Q9H813 350 aa22.61■■□□□ 1.21
CHKA-206ENST00000531341 UXTQ9UBK9 157 aaPredicted RBP22.61■■□□□ 1.21
CHKA-206ENST00000531341 MYO16Q9Y6X6 1858 aa22.61■■□□□ 1.21
CHKA-206ENST00000531341 NBEAQ8NFP9 2946 aa22.61■■□□□ 1.21
CHKA-206ENST00000531341 KIAA1549LQ6ZVL6 1849 aa22.6■■□□□ 1.21
CHKA-206ENST00000531341 PPP1R37O75864 691 aa22.6■■□□□ 1.21
CHKA-206ENST00000531341 IL18RAPO95256 599 aa22.6■■□□□ 1.21
CHKA-206ENST00000531341 HNRNPLP14866 589 aaKnown RBP eCLIP22.6■■□□□ 1.214e-24■■■□□ 18.3
CHKA-206ENST00000531341 IRX4P78413 519 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms