RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 PHGDHO43175 533 aaKnown RBP3.68□□□□□ -1.82
COPB1-205ENST00000526527 TIMM44O43615 452 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 UBXN7O94888 489 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 GPANK1O95872 356 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 MYL1P05976 194 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 SLC6A2P23975 617 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 HTR1BP28222 390 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 PCSK1P29120 753 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 MAP2K6P52564 334 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 HSD11B2P80365 405 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 HMGN5P82970 282 aaKnown RBP3.68□□□□□ -1.82
COPB1-205ENST00000526527 ATP8B2P98198 1209 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 MTA1Q13330 715 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 HABP2Q14520 560 aaPredicted RBP3.68□□□□□ -1.82
COPB1-205ENST00000526527 ZNF267Q14586 743 aaPredicted RBP3.68□□□□□ -1.82
COPB1-205ENST00000526527 CYP2A13Q16696 494 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 HSP90B2PQ58FF3 399 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 DARS2Q6PI48 645 aaKnown RBP3.68□□□□□ -1.82
COPB1-205ENST00000526527 CCDC149Q6ZUS6 474 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 ZNF365Q70YC5 407 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 PDSS2Q86YH6 399 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 HSCBQ8IWL3 235 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 RAVER1Q8IY67 606 aaKnown RBP3.68□□□□□ -1.82
COPB1-205ENST00000526527 ZBTB34Q8NCN2 500 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 LSM14AQ8ND56 463 aaKnown RBP3.68□□□□□ -1.82
COPB1-205ENST00000526527 TTC8Q8TAM2 541 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 KLHDC4Q8TBB5 520 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 TSR2Q969E8 191 aaKnown RBP3.68□□□□□ -1.82
COPB1-205ENST00000526527 RUNDC1Q96C34 613 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 PTCD3Q96EY7 689 aaKnown RBP3.68□□□□□ -1.82
COPB1-205ENST00000526527 SLC35A4Q96G79 324 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 ACO2Q99798 780 aaKnown RBP3.68□□□□□ -1.82
COPB1-205ENST00000526527 VRK1Q99986 396 aaPredicted RBP3.68□□□□□ -1.82
COPB1-205ENST00000526527 TMEM60Q9H2L4 133 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 SUDS3Q9H7L9 328 aaPredicted RBP3.68□□□□□ -1.82
COPB1-205ENST00000526527 BRD9Q9H8M2 597 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 PNPOQ9NVS9 261 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 PIH1D1Q9NWS0 290 aaKnown RBP3.68□□□□□ -1.82
COPB1-205ENST00000526527 ASB6Q9NWX5 421 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 KCTD5Q9NXV2 234 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 JKAMPQ9P055 326 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 SLC17A6Q9P2U8 582 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 KCNE5Q9UJ90 142 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 PCDHB1Q9Y5F3 818 aa3.68□□□□□ -1.82
COPB1-205ENST00000526527 WRNQ14191 1432 aaPredicted RBP eCLIP3.68□□□□□ -1.82
COPB1-205ENST00000526527 EIF4G3O43432 1585 aaKnown RBP3.68□□□□□ -1.82
COPB1-205ENST00000526527 PROP1O75360 226 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 AMY1AP04745 511 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 NBPF7P0C2Y1 421 aaPredicted RBP3.67□□□□□ -1.82
COPB1-205ENST00000526527 FAM200BP0CF97 657 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 TYRP14679 529 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 RPL17P18621 184 aaKnown RBP3.67□□□□□ -1.82
COPB1-205ENST00000526527 FPR1P21462 350 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 GCSHP23434 173 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 KCNJ5P48544 419 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 PROK1P58294 105 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 RAB1AP62820 205 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 ZNF844Q08AG5 666 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 UBXN2BQ14CS0 331 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 FLYWCH1Q4VC44 716 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 CCDC93Q567U6 631 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 CRELD2Q6UXH1 353 aaPredicted RBP3.67□□□□□ -1.82
COPB1-205ENST00000526527 ANKRD23Q86SG2 305 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 ZGPATQ8N5A5 531 aaKnown RBP3.67□□□□□ -1.82
COPB1-205ENST00000526527 IL17RDQ8NFM7 739 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 NUP133Q8WUM0 1156 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 STON2Q8WXE9 905 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 RAB24Q969Q5 203 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 SUCLG2Q96I99 432 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 MED15Q96RN5 788 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 PNKPQ96T60 521 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 LRRC27Q9C0I9 530 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 UNKLQ9H9P5 680 aaKnown RBP3.67□□□□□ -1.82
COPB1-205ENST00000526527 ANLNQ9NQW6 1124 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 FBXO34Q9NWN3 711 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 OBP2AQ9NY56 170 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 ARPP21Q9UBL0 812 aaPredicted RBP3.67□□□□□ -1.82
COPB1-205ENST00000526527 PCDHA3Q9Y5H8 950 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 AQRO60306 1485 aaKnown RBP eCLIP3.67□□□□□ -1.827e-7■■■□□ 17.9
COPB1-205ENST00000526527 IFT140Q96RY7 1462 aa3.67□□□□□ -1.82
COPB1-205ENST00000526527 TDRD9Q8NDG6 1382 aaKnown RBP3.66□□□□□ -1.82
COPB1-205ENST00000526527 WDR91A4D1P6 747 aa3.66□□□□□ -1.82
COPB1-205ENST00000526527 CFAP69A5D8W1 941 aa3.66□□□□□ -1.82
COPB1-205ENST00000526527 CDHR4A6H8M9 788 aa3.66□□□□□ -1.82
COPB1-205ENST00000526527 MYO1CO00159 1063 aa3.66□□□□□ -1.82
COPB1-205ENST00000526527 FOXN3O00409 490 aaPredicted RBP3.66□□□□□ -1.82
COPB1-205ENST00000526527 ERN1O75460 977 aaKnown RBP3.66□□□□□ -1.82
COPB1-205ENST00000526527 TUSC2O75896 110 aa3.66□□□□□ -1.82
COPB1-205ENST00000526527 ZBED1O96006 694 aa3.66□□□□□ -1.82
COPB1-205ENST00000526527 RARBP10826 455 aa3.66□□□□□ -1.82
COPB1-205ENST00000526527 NEFHP12036 1026 aa3.66□□□□□ -1.82
COPB1-205ENST00000526527 PRDX5P30044 214 aa3.66□□□□□ -1.82
COPB1-205ENST00000526527 CASQ1P31415 396 aa3.66□□□□□ -1.82
COPB1-205ENST00000526527 VAV2P52735 878 aa3.66□□□□□ -1.82
COPB1-205ENST00000526527 DSC2Q02487 901 aa3.66□□□□□ -1.82
COPB1-205ENST00000526527 MAP2K1Q02750 393 aaPredicted RBP3.66□□□□□ -1.82
COPB1-205ENST00000526527 POLD3Q15054 466 aaPredicted RBP3.66□□□□□ -1.82
COPB1-205ENST00000526527 CDC37Q16543 378 aaPredicted RBP3.66□□□□□ -1.82
COPB1-205ENST00000526527 PREPLQ4J6C6 727 aaPredicted RBP3.66□□□□□ -1.82
COPB1-205ENST00000526527 KLHL22Q53GT1 634 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms