RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 SAMD3Q8N6K7 520 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 SUPT20HQ8NEM7 779 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 TBC1D15Q8TC07 691 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 NEU4Q8WWR8 484 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 DNAAF4Q8WXU2 420 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 PPM1EQ8WY54 764 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 TSR2Q969E8 191 aaKnown RBP5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 CHFRQ96EP1 664 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 C1GALT1C1Q96EU7 318 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 BOD1Q96IK1 185 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 CDK5RAP3Q96JB5 506 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 ZNF396Q96N95 335 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 AIFM3Q96NN9 605 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 AGAP3Q96P47 875 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 ARPC5LQ9BPX5 153 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 C22orf23Q9BZE7 217 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 MAF1Q9H063 256 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 FAM107BQ9H098 131 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 RMI1Q9H9A7 625 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 GALNT9Q9HCQ5 603 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 SPATS2LQ9NUQ6 558 aaKnown RBP5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 KLHL11Q9NVR0 708 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 IRAK4Q9NWZ3 460 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 SLC23A1Q9UHI7 598 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 DMTF1Q9Y222 760 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 NUDCQ9Y266 331 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 V9GYY5 206 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 KTN1Q86UP2 1357 aaKnown RBP5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 YEATS2Q9ULM3 1422 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 CGNL1Q0VF96 1302 aa5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 WDR33Q9C0J8 1336 aaKnown RBP5.23□□□□□ -1.57
HMGB3P13-201ENST00000511263 NPC1L1Q9UHC9 1359 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 TCRBV7S2A1N4TA0A589 114 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 MYO1CO00159 1063 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 B3GALT2O43825 422 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 CAND2O75155 1236 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 SMC2O95347 1197 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 CHEK2O96017 543 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 GNAI2P04899 355 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 IVLP07476 585 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 CCDC175P0C221 793 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 MALP21145 153 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 PRPHP41219 470 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 MAGEA9P43362 315 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 KHDC1Q4VXA5 237 aaKnown RBP5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 IFIT1BQ5T764 474 aaKnown RBP5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 ABHD17BQ5VST6 288 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 CXorf57Q6NSI4 855 aaKnown RBP5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 CCDC73Q6ZRK6 1079 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 MMS22LQ6ZRQ5 1243 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 ZNF365Q70YC5 407 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 MRGPREQ86SM8 312 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 MORC1Q86VD1 984 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 SYT12Q8IV01 421 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 ULK2Q8IYT8 1036 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 TMEM132CQ8N3T6 1108 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 CPEB3Q8NE35 698 aaKnown RBP5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 MIPOL1Q8TD10 442 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 SMCR8Q8TEV9 937 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 PNISRQ8TF01 805 aaKnown RBP5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 JPH3Q8WXH2 748 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 SLC9A6Q92581 669 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 KAT5Q92993 513 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 TEKT1Q969V4 418 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 MVB12AQ96EY5 273 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 IKZF4Q9H2S9 585 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 BRD9Q9H8M2 597 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 TBCCD1Q9NVR7 557 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 CHMP5Q9NZZ3 219 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 PCDHB1Q9Y5F3 818 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 ZFYVE9O95405 1425 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 NOS1P29475 1434 aa5.22□□□□□ -1.57
HMGB3P13-201ENST00000511263 PZPP20742 1482 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 CDHR4A6H8M9 788 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 MYADML2A6NDP7 307 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 AKAP10O43572 662 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 SLC43A1O75387 559 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 PAX3P23760 479 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 FXR1P51114 621 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 IFT88Q13099 833 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 RESTQ13127 1097 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 DDX10Q13206 875 aaKnown RBP5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 LRRC41Q15345 812 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 DNAJC21Q5F1R6 531 aaKnown RBP5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 CAVIN1Q6NZI2 390 aaKnown RBP5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 TRIM74Q86UV6 250 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 TRIM73Q86UV7 250 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 ANKRD13BQ86YJ7 626 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 CAMKK1Q8N5S9 505 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 BRIX1Q8TDN6 353 aaKnown RBP5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 CCDC34Q96HJ3 373 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 PDLIM2Q96JY6 352 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 MYOCQ99972 504 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 CRACR2AQ9BSW2 395 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 ALOXE3Q9BYJ1 711 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 CDH19Q9H159 772 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 SARS2Q9NP81 518 aaKnown RBP5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 TMEM74BQ9NUR3 256 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 FBXO34Q9NWN3 711 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 GPRC5BQ9NZH0 403 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms