RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 ARHGEF3Q9NR81 526 aa5.85□□□□□ -1.47
UBE2D3-218ENST00000505009 XPR1Q9UBH6 696 aa5.85□□□□□ -1.47
UBE2D3-218ENST00000505009 MRPS17Q9Y2R5 130 aaKnown RBP5.85□□□□□ -1.47
UBE2D3-218ENST00000505009 MED16Q9Y2X0 877 aa5.85□□□□□ -1.47
UBE2D3-218ENST00000505009 MARCH6O60337 910 aa5.84□□□□□ -1.47
UBE2D3-218ENST00000505009 NXPH3O95157 252 aa5.84□□□□□ -1.47
UBE2D3-218ENST00000505009 IL6RP08887 468 aaPredicted RBP5.84□□□□□ -1.47
UBE2D3-218ENST00000505009 SLC11A2P49281 568 aa5.84□□□□□ -1.47
UBE2D3-218ENST00000505009 TFF2Q03403 129 aa5.84□□□□□ -1.47
UBE2D3-218ENST00000505009 LRRC41Q15345 812 aa5.84□□□□□ -1.47
UBE2D3-218ENST00000505009 ZIK1Q3SY52 487 aaPredicted RBP5.84□□□□□ -1.47
UBE2D3-218ENST00000505009 TMEM119Q4V9L6 283 aa5.84□□□□□ -1.47
UBE2D3-218ENST00000505009 FCRLBQ6BAA4 426 aa5.84□□□□□ -1.47
UBE2D3-218ENST00000505009 RGS7BPQ6MZT1 257 aaPredicted RBP5.84□□□□□ -1.47
UBE2D3-218ENST00000505009 CXorf57Q6NSI4 855 aaKnown RBP5.84□□□□□ -1.47
UBE2D3-218ENST00000505009 DAAM2Q86T65 1068 aa5.84□□□□□ -1.47
UBE2D3-218ENST00000505009 DTX2Q86UW9 622 aa5.84□□□□□ -1.47
UBE2D3-218ENST00000505009 ATG4AQ8WYN0 398 aa5.84□□□□□ -1.47
UBE2D3-218ENST00000505009 PTDSS2Q9BVG9 487 aa5.84□□□□□ -1.47
UBE2D3-218ENST00000505009 ZMAT3Q9HA38 289 aaKnown RBP5.84□□□□□ -1.47
UBE2D3-218ENST00000505009 PIH1D1Q9NWS0 290 aaKnown RBP5.84□□□□□ -1.47
UBE2D3-218ENST00000505009 NOB1Q9ULX3 412 aaKnown RBP5.84□□□□□ -1.47
UBE2D3-218ENST00000505009 PADI4Q9UM07 663 aa5.84□□□□□ -1.47
UBE2D3-218ENST00000505009 H0YIZ8 118 aa5.83□□□□□ -1.48
UBE2D3-218ENST00000505009 KITP10721 976 aa5.83□□□□□ -1.48
UBE2D3-218ENST00000505009 CYP2C9P11712 490 aa5.83□□□□□ -1.48
UBE2D3-218ENST00000505009 SRSF4Q08170 494 aaKnown RBP5.83□□□□□ -1.48
UBE2D3-218ENST00000505009 ODR4Q5SWX8 454 aa5.83□□□□□ -1.48
UBE2D3-218ENST00000505009 ZNF618Q5T7W0 954 aa5.83□□□□□ -1.48
UBE2D3-218ENST00000505009 OVCH2Q7RTZ1 564 aa5.83□□□□□ -1.48
UBE2D3-218ENST00000505009 DLL3Q9NYJ7 618 aa5.83□□□□□ -1.48
UBE2D3-218ENST00000505009 NDRG4Q9ULP0 352 aaKnown RBP5.83□□□□□ -1.48
UBE2D3-218ENST00000505009 ZNF213O14771 459 aa5.82□□□□□ -1.48
UBE2D3-218ENST00000505009 FESP07332 822 aa5.82□□□□□ -1.48
UBE2D3-218ENST00000505009 NHLRC4P0CG21 123 aaPredicted RBP5.82□□□□□ -1.48
UBE2D3-218ENST00000505009 XRCC6P12956 609 aaKnown RBP eCLIP5.82□□□□□ -1.48
UBE2D3-218ENST00000505009 NDUFB7P17568 137 aa5.82□□□□□ -1.48
UBE2D3-218ENST00000505009 LMO1P25800 156 aa5.82□□□□□ -1.48
UBE2D3-218ENST00000505009 PPIFP30405 207 aaKnown RBP5.82□□□□□ -1.48
UBE2D3-218ENST00000505009 VIPR2P41587 438 aa5.82□□□□□ -1.48
UBE2D3-218ENST00000505009 ARFIP2P53365 341 aa5.82□□□□□ -1.48
UBE2D3-218ENST00000505009 GPSM2P81274 684 aa5.82□□□□□ -1.48
UBE2D3-218ENST00000505009 DNAJC5GQ8N7S2 189 aa5.82□□□□□ -1.48
UBE2D3-218ENST00000505009 HASPINQ8TF76 798 aa5.82□□□□□ -1.48
UBE2D3-218ENST00000505009 B3GNT5Q9BYG0 378 aa5.82□□□□□ -1.48
UBE2D3-218ENST00000505009 TRIM54Q9BYV2 358 aa5.82□□□□□ -1.48
UBE2D3-218ENST00000505009 ATP6V0A4Q9HBG4 840 aa5.82□□□□□ -1.48
UBE2D3-218ENST00000505009 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.82□□□□□ -1.48
UBE2D3-218ENST00000505009 TMX2Q9Y320 296 aa5.82□□□□□ -1.48
UBE2D3-218ENST00000505009 PAXBP1Q9Y5B6 917 aa5.82□□□□□ -1.48
UBE2D3-218ENST00000505009 TMEM233B4DJY2 109 aa5.81□□□□□ -1.48
UBE2D3-218ENST00000505009 TARM1B6A8C7 271 aa5.81□□□□□ -1.48
UBE2D3-218ENST00000505009 MYO1CO00159 1063 aa5.81□□□□□ -1.48
UBE2D3-218ENST00000505009 SLC16A3O15427 465 aaKnown RBP5.81□□□□□ -1.48
UBE2D3-218ENST00000505009 TLR5O60602 858 aa5.81□□□□□ -1.48
UBE2D3-218ENST00000505009 CSF1RP07333 972 aa5.81□□□□□ -1.48
UBE2D3-218ENST00000505009 CYP2C18P33260 490 aa5.81□□□□□ -1.48
UBE2D3-218ENST00000505009 ABCG1P45844 678 aa5.81□□□□□ -1.48
UBE2D3-218ENST00000505009 ALDH9A1P49189 494 aa5.81□□□□□ -1.48
UBE2D3-218ENST00000505009 KRTAP1-1Q07627 177 aa5.81□□□□□ -1.48
UBE2D3-218ENST00000505009 PLEKHG6Q3KR16 790 aa5.81□□□□□ -1.48
UBE2D3-218ENST00000505009 SWSAP1Q6NVH7 229 aa5.81□□□□□ -1.48
UBE2D3-218ENST00000505009 NPNTQ6UXI9 565 aa5.81□□□□□ -1.48
UBE2D3-218ENST00000505009 ZNF782Q6ZMW2 699 aaPredicted RBP5.81□□□□□ -1.48
UBE2D3-218ENST00000505009 SLC15A4Q8N697 577 aa5.81□□□□□ -1.48
UBE2D3-218ENST00000505009 GLG1Q92896 1179 aa5.81□□□□□ -1.48
UBE2D3-218ENST00000505009 R3HDM4Q96D70 268 aa5.81□□□□□ -1.48
UBE2D3-218ENST00000505009 REPS1Q96D71 796 aa5.81□□□□□ -1.48
UBE2D3-218ENST00000505009 MACROD1Q9BQ69 325 aa5.81□□□□□ -1.48
UBE2D3-218ENST00000505009 CXorf36Q9H7Y0 433 aa5.81□□□□□ -1.48
UBE2D3-218ENST00000505009 SH3BP4Q9P0V3 963 aa5.81□□□□□ -1.48
UBE2D3-218ENST00000505009 SHOC2Q9UQ13 582 aa5.81□□□□□ -1.48
UBE2D3-218ENST00000505009 COL3A1P02461 1466 aaPredicted RBP5.8□□□□□ -1.48
UBE2D3-218ENST00000505009 A1L4Q6 167 aa5.8□□□□□ -1.48
UBE2D3-218ENST00000505009 ERC2O15083 957 aa5.8□□□□□ -1.48
UBE2D3-218ENST00000505009 TUSC2O75896 110 aa5.8□□□□□ -1.48
UBE2D3-218ENST00000505009 ONECUT2O95948 504 aa5.8□□□□□ -1.48
UBE2D3-218ENST00000505009 S100BP04271 92 aaPredicted RBP5.8□□□□□ -1.48
UBE2D3-218ENST00000505009 PRKCGP05129 697 aa5.8□□□□□ -1.48
UBE2D3-218ENST00000505009 FAM163BP0C2L3 166 aa5.8□□□□□ -1.48
UBE2D3-218ENST00000505009 ENGP17813 658 aa5.8□□□□□ -1.48
UBE2D3-218ENST00000505009 ADORA2AP29274 412 aa5.8□□□□□ -1.48
UBE2D3-218ENST00000505009 AGFG1P52594 562 aaKnown RBP5.8□□□□□ -1.48
UBE2D3-218ENST00000505009 WNT3P56703 355 aa5.8□□□□□ -1.48
UBE2D3-218ENST00000505009 MYO1EQ12965 1108 aa5.8□□□□□ -1.48
UBE2D3-218ENST00000505009 CTBP1Q13363 440 aa5.8□□□□□ -1.48
UBE2D3-218ENST00000505009 MINDY4Q4G0A6 757 aa5.8□□□□□ -1.48
UBE2D3-218ENST00000505009 DEPDC1Q5TB30 811 aa5.8□□□□□ -1.48
UBE2D3-218ENST00000505009 PTF1AQ7RTS3 328 aa5.8□□□□□ -1.48
UBE2D3-218ENST00000505009 KBTBD7Q8WVZ9 684 aa5.8□□□□□ -1.48
UBE2D3-218ENST00000505009 RUNDC1Q96C34 613 aa5.8□□□□□ -1.48
UBE2D3-218ENST00000505009 MESP1Q9BRJ9 268 aa5.8□□□□□ -1.48
UBE2D3-218ENST00000505009 SH2B3Q9UQQ2 575 aa5.8□□□□□ -1.48
UBE2D3-218ENST00000505009 TBC1D30Q9Y2I9 924 aa5.8□□□□□ -1.48
UBE2D3-218ENST00000505009 A0A087WWL8 130 aa5.79□□□□□ -1.48
UBE2D3-218ENST00000505009 A0A1W2PPL8 197 aa5.79□□□□□ -1.48
UBE2D3-218ENST00000505009 DNAJC9-AS1A6NH13 148 aa5.79□□□□□ -1.48
UBE2D3-218ENST00000505009 BTN3A1O00481 513 aa5.79□□□□□ -1.48
UBE2D3-218ENST00000505009 CTNND1O60716 968 aaKnown RBP5.79□□□□□ -1.48
UBE2D3-218ENST00000505009 VNN1O95497 513 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms