RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 DGKEP52429 567 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 LILRA4P59901 499 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 RPS7P62081 194 aaKnown RBP6.43□□□□□ -1.38
SSR3-208ENST00000496050 BIRC3Q13489 604 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 DYRK1AQ13627 763 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 PTK2BQ14289 1009 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 SPARCL1Q14515 664 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 FCRL6Q6DN72 434 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 SFRP4Q6FHJ7 346 aaPredicted RBP6.43□□□□□ -1.38
SSR3-208ENST00000496050 TMEM108Q6UXF1 575 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 ZNF280BQ86YH2 543 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 TMEM132CQ8N3T6 1108 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 ATG16L2Q8NAA4 619 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 ZNF384Q8TF68 577 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 ADOQ96SZ5 270 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 RMDN3Q96TC7 470 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 ZSWIM1Q9BR11 485 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 ISCA1Q9BUE6 129 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 AURKAIP1Q9NWT8 199 aaPredicted RBP6.43□□□□□ -1.38
SSR3-208ENST00000496050 TCAF1Q9Y4C2 921 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 NOX1Q9Y5S8 564 aa6.43□□□□□ -1.38
SSR3-208ENST00000496050 PRAMEF33A0A0G2JMD5 474 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 GAGE12BA1L429 117 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 GAGE12HA6NDE8 117 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 F5H697 171 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 NPC1O15118 1278 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 TRIAP1O43715 76 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 PRAMEF10O60809 474 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 RASAL1O95294 804 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 HSD3B1P14060 373 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 RENBPP51606 427 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 OCA2Q04671 838 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 E2F2Q14209 437 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 HLXQ14774 488 aaPredicted RBP6.42□□□□□ -1.38
SSR3-208ENST00000496050 MAPKAPK3Q16644 382 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 CACHD1Q5VU97 1274 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 MZT2AQ6P582 158 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 Q8NA96 180 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 CPT1CQ8TCG5 803 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 BPIFB1Q8TDL5 484 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 C18orf8Q96DM3 657 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 BOD1Q96IK1 185 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 SMOC2Q9H3U7 446 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 ZBTB26Q9HCK0 441 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 TMEM8AQ9HCN3 771 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 DACT1Q9NYF0 836 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 LRFN1Q9P244 771 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 KCNE5Q9UJ90 142 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 ZMYND8Q9ULU4 1186 aaPredicted RBP6.42□□□□□ -1.38
SSR3-208ENST00000496050 CHST2Q9Y4C5 530 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 CDY1Q9Y6F8 540 aa6.42□□□□□ -1.38
SSR3-208ENST00000496050 A0A1W2PS29 197 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 CCDC78A2IDD5 438 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 MYADML2A6NDP7 307 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 LGALS16A8MUM7 142 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 AHRRA9YTQ3 701 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 RNASET2O00584 256 aaKnown RBP6.41□□□□□ -1.38
SSR3-208ENST00000496050 CFIP05156 583 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 SERPINF1P36955 418 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 ZNF134P52741 427 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 PRKAG1P54619 331 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 POLE2P56282 527 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 ICAM4Q14773 271 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 ZNF750Q32MQ0 723 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 PREPLQ4J6C6 727 aaPredicted RBP6.41□□□□□ -1.38
SSR3-208ENST00000496050 RABL3Q5HYI8 236 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.41□□□□□ -1.38
SSR3-208ENST00000496050 LDHAL6AQ6ZMR3 332 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 KIAA0408Q6ZU52 694 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 MICALCLQ6ZW33 695 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 USP49Q70CQ1 688 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 CACNA2D3Q8IZS8 1091 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 SPARTQ8N0X7 666 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 CHST13Q8NET6 341 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 TRAPPC12Q8WVT3 735 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 SLC46A2Q9BY10 475 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 PCDHAC1Q9H158 963 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 TMOD4Q9NZQ9 345 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 DGKBQ9Y6T7 804 aa6.41□□□□□ -1.38
SSR3-208ENST00000496050 A0A087WZ62 844 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 hCG_1984214I3L0E3 225 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 PIP5K1BO14986 540 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 RRP9O43818 475 aaKnown RBP6.4□□□□□ -1.38
SSR3-208ENST00000496050 PIAS2O75928 621 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 ELANEP08246 267 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 KCNA3P22001 575 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 PRKAR1BP31321 381 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 ATICP31939 592 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 NPTX2P47972 431 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 NDUFV1P49821 464 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 ITGA8P53708 1063 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 GALNT1Q10472 559 aaPredicted RBP6.4□□□□□ -1.38
SSR3-208ENST00000496050 FOXO1Q12778 655 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 MYO1EQ12965 1108 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 PRKD1Q15139 912 aaPredicted RBP6.4□□□□□ -1.38
SSR3-208ENST00000496050 FAXCQ5TGI0 409 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 MRNIPQ6NTE8 343 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 ARMC6Q6NXE6 501 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 CRTC1Q6UUV9 634 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 TMPRSS9Q7Z410 1059 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms