RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 GJD3Q8N144 294 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 TTC9BQ8N6N2 239 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 EHBP1Q8NDI1 1231 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 NXPE3Q969Y0 559 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 TRMT2BQ96GJ1 504 aaKnown RBP11.79□□□□□ -0.52
CPSF7-212ENST00000489728 C8orf48Q96LL4 319 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 FUCA2Q9BTY2 467 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 INTS2Q9H0H0 1204 aaKnown RBP11.79□□□□□ -0.52
CPSF7-212ENST00000489728 DNAJC25Q9H1X3 360 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 NDST4Q9H3R1 872 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 DPEP3Q9H4B8 488 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 CISHQ9NSE2 258 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 SAMSN1Q9NSI8 373 aaKnown RBP11.79□□□□□ -0.52
CPSF7-212ENST00000489728 GDE1Q9NZC3 331 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 GCNT4Q9P109 453 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 UXTQ9UBK9 157 aaPredicted RBP11.79□□□□□ -0.52
CPSF7-212ENST00000489728 CDH22Q9UJ99 828 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 SLC27A5Q9Y2P5 690 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 NME7Q9Y5B8 376 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 VCANP13611 3396 aa11.79□□□□□ -0.52
CPSF7-212ENST00000489728 TCF20Q9UGU0 1960 aaKnown RBP11.78□□□□□ -0.52
CPSF7-212ENST00000489728 SMTNL1A8MU46 457 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 HCRTO43612 131 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 RFX1P22670 979 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 CYP27A1Q02318 531 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 EXOC3L4Q17RC7 722 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 ANO6Q4KMQ2 910 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 VWA3BQ502W6 1294 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 MIIPQ5JXC2 388 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 PRSS36Q5K4E3 855 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 TRIM65Q6PJ69 517 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 DNAJB7Q7Z6W7 309 aaPredicted RBP11.78□□□□□ -0.52
CPSF7-212ENST00000489728 ACOT1Q86TX2 421 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 TMC8Q8IU68 726 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 UBR7Q8N806 425 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 TATDN2Q93075 761 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 SMARCD1Q96GM5 515 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 RPGRIP1Q96KN7 1286 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 MYRFLQ96LU7 910 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 CORO1BQ9BR76 489 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 LRRC3Q9BY71 257 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 GPR88Q9GZN0 384 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 PNPLA8Q9NP80 782 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 HCFC1R1Q9NWW0 138 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 HMGXB4Q9UGU5 601 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 CDH7Q9ULB5 785 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 KIAA1257Q9ULG3 409 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 MRPS23Q9Y3D9 190 aaKnown RBP11.78□□□□□ -0.52
CPSF7-212ENST00000489728 DAAM1Q9Y4D1 1078 aa11.78□□□□□ -0.52
CPSF7-212ENST00000489728 SYCE3A1L190 88 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 C2CD4DB7Z1M9 353 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 LRRN2O75325 713 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 NOL4O94818 638 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 PAEPP09466 180 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 LAMP2P13473 410 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 ZNF18P17022 549 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 CD58P19256 250 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 BDNFP23560 247 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 CYP2F1P24903 491 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 ANXA13P27216 316 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 CDC25CP30307 473 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 SSTR3P32745 418 aaPredicted RBP11.77□□□□□ -0.53
CPSF7-212ENST00000489728 ZNF165P49910 485 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 TAF12Q16514 161 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 ZSCAN23Q3MJ62 389 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 GET4Q7L5D6 327 aaPredicted RBP11.77□□□□□ -0.53
CPSF7-212ENST00000489728 FAM35AQ86V20 835 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 CREBRFQ8IUR6 639 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 NPAS3Q8IXF0 933 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 FUKQ8N0W3 1084 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 PPM1KQ8N3J5 372 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 FEZF2Q8TBJ5 459 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 FAM200AQ8TCP9 573 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 WHAMMQ8TF30 809 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 ELMO3Q96BJ8 720 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 TMEM176AQ96HP8 235 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 GCNAQ96QF7 691 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 HNRNPABQ99729 332 aaKnown RBP11.77□□□□□ -0.53
CPSF7-212ENST00000489728 ARID3AQ99856 593 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 COL25A1Q9BXS0 654 aaPredicted RBP11.77□□□□□ -0.53
CPSF7-212ENST00000489728 B3GNT5Q9BYG0 378 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 CSNK1G1Q9HCP0 422 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 DMAP1Q9NPF5 467 aaPredicted RBP11.77□□□□□ -0.53
CPSF7-212ENST00000489728 FANCLQ9NW38 375 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 COMMD8Q9NX08 183 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 IGSF9Q9P2J2 1179 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 APEX2Q9UBZ4 518 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 LIMA1Q9UHB6 759 aaKnown RBP11.77□□□□□ -0.53
CPSF7-212ENST00000489728 NOTCH4Q99466 2003 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 NCOR1O75376 2440 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 TTC28Q96AY4 2481 aa11.77□□□□□ -0.53
CPSF7-212ENST00000489728 DOCK8Q8NF50 2099 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 LRRC10BA6NIK2 292 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 TNFRSF10AO00220 468 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 SOAT2O75908 522 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 FAM200BP0CF97 657 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 HMGA1P17096 107 aaKnown RBP11.76□□□□□ -0.53
CPSF7-212ENST00000489728 DDX6P26196 483 aaKnown RBP eCLIP11.76□□□□□ -0.53
CPSF7-212ENST00000489728 WEE1P30291 646 aa11.76□□□□□ -0.53
CPSF7-212ENST00000489728 GBP2P32456 591 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms