RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 CYP26C1Q6V0L0 522 aa20.6■□□□□ 0.89
PCOLCE-208ENST00000487172 C12orf29Q8N999 325 aa20.6■□□□□ 0.89
PCOLCE-208ENST00000487172 SLC7A14Q8TBB6 771 aa20.6■□□□□ 0.89
PCOLCE-208ENST00000487172 HLA-CQ95604 372 aa20.6■□□□□ 0.89
PCOLCE-208ENST00000487172 CYFIP2Q96F07 1278 aa20.6■□□□□ 0.89
PCOLCE-208ENST00000487172 HEXIM2Q96MH2 286 aaKnown RBP20.6■□□□□ 0.89
PCOLCE-208ENST00000487172 HNRNPABQ99729 332 aaKnown RBP20.6■□□□□ 0.89
PCOLCE-208ENST00000487172 LPIN3Q9BQK8 851 aa20.6■□□□□ 0.89
PCOLCE-208ENST00000487172 B3GNT5Q9BYG0 378 aa20.6■□□□□ 0.89
PCOLCE-208ENST00000487172 XPO4Q9C0E2 1151 aaKnown RBP20.6■□□□□ 0.89
PCOLCE-208ENST00000487172 UBE2ZQ9H832 354 aaPredicted RBP20.6■□□□□ 0.89
PCOLCE-208ENST00000487172 ABI2Q9NYB9 513 aaPredicted RBP20.6■□□□□ 0.89
PCOLCE-208ENST00000487172 PRRG1O14668 218 aa20.59■□□□□ 0.89
PCOLCE-208ENST00000487172 VDRP11473 427 aa20.59■□□□□ 0.89
PCOLCE-208ENST00000487172 POLR2FP61218 127 aaKnown RBP20.59■□□□□ 0.89
PCOLCE-208ENST00000487172 CYP27A1Q02318 531 aa20.59■□□□□ 0.89
PCOLCE-208ENST00000487172 DRAP1Q14919 205 aaPredicted RBP20.59■□□□□ 0.89
PCOLCE-208ENST00000487172 SKIV2LQ15477 1246 aaKnown RBP20.59■□□□□ 0.89
PCOLCE-208ENST00000487172 PPM1LQ5SGD2 360 aa20.59■□□□□ 0.89
PCOLCE-208ENST00000487172 ARHGAP17Q68EM7 881 aa20.59■□□□□ 0.89
PCOLCE-208ENST00000487172 PAQR9Q6ZVX9 377 aa20.59■□□□□ 0.89
PCOLCE-208ENST00000487172 FUKQ8N0W3 1084 aa20.59■□□□□ 0.89
PCOLCE-208ENST00000487172 RBBP8NLQ8NC74 664 aaPredicted RBP20.59■□□□□ 0.89
PCOLCE-208ENST00000487172 GPR88Q9GZN0 384 aa20.59■□□□□ 0.89
PCOLCE-208ENST00000487172 SLC27A5Q9Y2P5 690 aa20.59■□□□□ 0.89
PCOLCE-208ENST00000487172 INSL5Q9Y5Q6 135 aa20.59■□□□□ 0.89
PCOLCE-208ENST00000487172 PTPRDP23468 1912 aa20.59■□□□□ 0.89
PCOLCE-208ENST00000487172 FOXN3O00409 490 aaPredicted RBP20.58■□□□□ 0.89
PCOLCE-208ENST00000487172 EPHB6O15197 1021 aa20.58■□□□□ 0.89
PCOLCE-208ENST00000487172 RFPL2O75678 378 aa20.58■□□□□ 0.89
PCOLCE-208ENST00000487172 PLD1Q13393 1074 aa20.58■□□□□ 0.89
PCOLCE-208ENST00000487172 FIGNQ5HY92 759 aa20.58■□□□□ 0.89
PCOLCE-208ENST00000487172 FAM71AQ8IYT1 594 aa20.58■□□□□ 0.89
PCOLCE-208ENST00000487172 CEP295NLQ96MC4 621 aa20.58■□□□□ 0.89
PCOLCE-208ENST00000487172 NUP58Q9BVL2 599 aa20.58■□□□□ 0.89
PCOLCE-208ENST00000487172 PRKD2Q9BZL6 878 aa20.58■□□□□ 0.89
PCOLCE-208ENST00000487172 EDEM3Q9BZQ6 932 aa20.58■□□□□ 0.89
PCOLCE-208ENST00000487172 S1PR5Q9H228 398 aa20.58■□□□□ 0.89
PCOLCE-208ENST00000487172 YIPF1Q9Y548 306 aa20.58■□□□□ 0.89
PCOLCE-208ENST00000487172 ATP8B3O60423 1300 aa20.57■□□□□ 0.88
PCOLCE-208ENST00000487172 CCDC195A0A1B0GUA6 201 aa20.57■□□□□ 0.88
PCOLCE-208ENST00000487172 LRG1P02750 347 aa20.57■□□□□ 0.88
PCOLCE-208ENST00000487172 KRT5P13647 590 aa20.57■□□□□ 0.88
PCOLCE-208ENST00000487172 CCDC130P13994 396 aa20.57■□□□□ 0.88
PCOLCE-208ENST00000487172 BDNFP23560 247 aa20.57■□□□□ 0.88
PCOLCE-208ENST00000487172 CYP2F1P24903 491 aa20.57■□□□□ 0.88
PCOLCE-208ENST00000487172 ALDH1A3P47895 512 aa20.57■□□□□ 0.88
PCOLCE-208ENST00000487172 JAM2P57087 298 aa20.57■□□□□ 0.88
PCOLCE-208ENST00000487172 ITIH3Q06033 890 aa20.57■□□□□ 0.88
PCOLCE-208ENST00000487172 RAPGEF1Q13905 1077 aa20.57■□□□□ 0.88
PCOLCE-208ENST00000487172 STILQ15468 1287 aa20.57■□□□□ 0.88
PCOLCE-208ENST00000487172 MGAT5BQ3V5L5 792 aa20.57■□□□□ 0.88
PCOLCE-208ENST00000487172 SGO2Q562F6 1265 aa20.57■□□□□ 0.88
PCOLCE-208ENST00000487172 PPP1R26Q5T8A7 1209 aaPredicted RBP20.57■□□□□ 0.88
PCOLCE-208ENST00000487172 EP400NLQ6ZTU2 488 aa20.57■□□□□ 0.88
PCOLCE-208ENST00000487172 TTC9BQ8N6N2 239 aa20.57■□□□□ 0.88
PCOLCE-208ENST00000487172 SLC2A14Q8TDB8 520 aa20.57■□□□□ 0.88
PCOLCE-208ENST00000487172 IQCDQ96DY2 449 aa20.57■□□□□ 0.88
PCOLCE-208ENST00000487172 ZNF518BQ9C0D4 1074 aa20.57■□□□□ 0.88
PCOLCE-208ENST00000487172 ITIH6Q6UXX5 1313 aa20.56■□□□□ 0.88
PCOLCE-208ENST00000487172 SPDYE4A6NLX3 237 aa20.56■□□□□ 0.88
PCOLCE-208ENST00000487172 F8VZ95 297 aa20.56■□□□□ 0.88
PCOLCE-208ENST00000487172 CLDN5O00501 218 aa20.56■□□□□ 0.88
PCOLCE-208ENST00000487172 RPL10AP62906 217 aaKnown RBP20.56■□□□□ 0.88
PCOLCE-208ENST00000487172 TWF1Q12792 350 aa20.56■□□□□ 0.88
PCOLCE-208ENST00000487172 PTPN21Q16825 1174 aa20.56■□□□□ 0.88
PCOLCE-208ENST00000487172 GPR149Q86SP6 731 aa20.56■□□□□ 0.88
PCOLCE-208ENST00000487172 FAM35AQ86V20 835 aa20.56■□□□□ 0.88
PCOLCE-208ENST00000487172 C12orf76Q8N812 135 aaPredicted RBP20.56■□□□□ 0.88
PCOLCE-208ENST00000487172 ZNF707Q96C28 371 aaPredicted RBP20.56■□□□□ 0.88
PCOLCE-208ENST00000487172 SMARCD1Q96GM5 515 aa20.56■□□□□ 0.88
PCOLCE-208ENST00000487172 C8orf48Q96LL4 319 aa20.56■□□□□ 0.88
PCOLCE-208ENST00000487172 SEPT5Q99719 369 aaPredicted RBP20.56■□□□□ 0.88
PCOLCE-208ENST00000487172 MED10Q9BTT4 135 aa20.56■□□□□ 0.88
PCOLCE-208ENST00000487172 TTYH3Q9C0H2 523 aa20.56■□□□□ 0.88
PCOLCE-208ENST00000487172 ADAM7Q9H2U9 754 aa20.56■□□□□ 0.88
PCOLCE-208ENST00000487172 NLRC4Q9NPP4 1024 aa20.56■□□□□ 0.88
PCOLCE-208ENST00000487172 FAM49BQ9NUQ9 324 aa20.56■□□□□ 0.88
PCOLCE-208ENST00000487172 CD207Q9UJ71 328 aa20.56■□□□□ 0.88
PCOLCE-208ENST00000487172 MYO6Q9UM54 1294 aa20.56■□□□□ 0.88
PCOLCE-208ENST00000487172 ASB3Q9Y575 518 aa20.56■□□□□ 0.88
PCOLCE-208ENST00000487172 TRIM66O15016 1216 aa20.55■□□□□ 0.88
PCOLCE-208ENST00000487172 AP5Z1O43299 807 aa20.55■□□□□ 0.88
PCOLCE-208ENST00000487172 CD19P15391 556 aa20.55■□□□□ 0.88
PCOLCE-208ENST00000487172 KCNA5P22460 613 aa20.55■□□□□ 0.88
PCOLCE-208ENST00000487172 CLCN1P35523 988 aa20.55■□□□□ 0.88
PCOLCE-208ENST00000487172 BPIFB4P59827 614 aa20.55■□□□□ 0.88
PCOLCE-208ENST00000487172 PTK2Q05397 1052 aa20.55■□□□□ 0.88
PCOLCE-208ENST00000487172 CNGA2Q16280 664 aa20.55■□□□□ 0.88
PCOLCE-208ENST00000487172 RARS2Q5T160 578 aaKnown RBP20.55■□□□□ 0.88
PCOLCE-208ENST00000487172 CACNA2D4Q7Z3S7 1137 aa20.55■□□□□ 0.88
PCOLCE-208ENST00000487172 SMRP1Q8NCR6 262 aa20.55■□□□□ 0.88
PCOLCE-208ENST00000487172 SPATA17Q96L03 361 aa20.55■□□□□ 0.88
PCOLCE-208ENST00000487172 SPAG5Q96R06 1193 aa20.55■□□□□ 0.88
PCOLCE-208ENST00000487172 CSNK1G1Q9HCP0 422 aa20.55■□□□□ 0.88
PCOLCE-208ENST00000487172 O00370 1275 aa20.54■□□□□ 0.88
PCOLCE-208ENST00000487172 CYP26A1O43174 497 aa20.54■□□□□ 0.88
PCOLCE-208ENST00000487172 XYLBO75191 536 aa20.54■□□□□ 0.88
PCOLCE-208ENST00000487172 ATF6P18850 670 aa20.54■□□□□ 0.88
PCOLCE-208ENST00000487172 SOX5P35711 763 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms