RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 USP4Q13107 963 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 SLC14A1Q13336 389 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 ZNF77Q15935 545 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 EML3Q32P44 896 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 SEZ6Q53EL9 994 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 C2orf27AQ580R0 203 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 EOGTQ5NDL2 527 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 TXNDC8Q6A555 127 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 SLC36A4Q6YBV0 504 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 TAS1R3Q7RTX0 852 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 MON1AQ86VX9 555 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 TMEFF1Q8IYR6 380 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 DCP1BQ8IZD4 617 aaKnown RBP8.27□□□□□ -1.09
PDPN-205ENST00000487038 MINDY1Q8N5J2 469 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 FSIP1Q8NA03 581 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 OR10T2Q8NGX3 314 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 OLIG1Q8TAK6 271 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 USP33Q8TEY7 942 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 ADAMTS14Q8WXS8 1223 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 EZH1Q92800 747 aaPredicted RBP8.27□□□□□ -1.09
PDPN-205ENST00000487038 BICD1Q96G01 975 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 SENP8Q96LD8 212 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 LARP6Q9BRS8 491 aaKnown RBP8.27□□□□□ -1.09
PDPN-205ENST00000487038 TIPINQ9BVW5 301 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 TMEM60Q9H2L4 133 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 POLD4Q9HCU8 107 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 TRPC7Q9HCX4 862 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 PDRG1Q9NUG6 133 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 DDX19AQ9NUU7 478 aaKnown RBP8.27□□□□□ -1.09
PDPN-205ENST00000487038 ABI2Q9NYB9 513 aaPredicted RBP8.27□□□□□ -1.09
PDPN-205ENST00000487038 PILRBQ9UKJ0 227 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 MAGED2Q9UNF1 606 aaPredicted RBP8.27□□□□□ -1.09
PDPN-205ENST00000487038 APOBEC2Q9Y235 224 aaKnown RBP8.27□□□□□ -1.09
PDPN-205ENST00000487038 PCDHB5Q9Y5E4 795 aa8.27□□□□□ -1.09
PDPN-205ENST00000487038 TTC26A0AVF1 554 aa8.26□□□□□ -1.09
PDPN-205ENST00000487038 BTBD18B2RXH4 712 aa8.26□□□□□ -1.09
PDPN-205ENST00000487038 H0YCG3 227 aa8.26□□□□□ -1.09
PDPN-205ENST00000487038 SLC16A4O15374 487 aa8.26□□□□□ -1.09
PDPN-205ENST00000487038 PFKFB2O60825 505 aa8.26□□□□□ -1.09
PDPN-205ENST00000487038 CAPNS1P04632 268 aa8.26□□□□□ -1.09
PDPN-205ENST00000487038 PTGER3P43115 390 aa8.26□□□□□ -1.09
PDPN-205ENST00000487038 TSPY1Q01534 308 aa8.26□□□□□ -1.09
PDPN-205ENST00000487038 RPL6Q02878 288 aaKnown RBP8.26□□□□□ -1.09
PDPN-205ENST00000487038 KCNB1Q14721 858 aa8.26□□□□□ -1.09
PDPN-205ENST00000487038 SAFBQ15424 915 aaKnown RBP eCLIP8.26□□□□□ -1.09
PDPN-205ENST00000487038 TRIP6Q15654 476 aaKnown RBP8.26□□□□□ -1.09
PDPN-205ENST00000487038 ZBTB6Q15916 424 aa8.26□□□□□ -1.09
PDPN-205ENST00000487038 SPATA1Q5VX52 437 aa8.26□□□□□ -1.09
PDPN-205ENST00000487038 NAIF1Q69YI7 327 aaPredicted RBP8.26□□□□□ -1.09
PDPN-205ENST00000487038 TMEM150AQ86TG1 271 aa8.26□□□□□ -1.09
PDPN-205ENST00000487038 CD302Q8IX05 232 aa8.26□□□□□ -1.09
PDPN-205ENST00000487038 EFCAB13Q8IY85 973 aa8.26□□□□□ -1.09
PDPN-205ENST00000487038 PGBD3Q8N328 593 aa8.26□□□□□ -1.09
PDPN-205ENST00000487038 SNX29Q8TEQ0 813 aa8.26□□□□□ -1.09
PDPN-205ENST00000487038 HNRNPLLQ8WVV9 542 aaKnown RBP8.26□□□□□ -1.09
PDPN-205ENST00000487038 TRMT2BQ96GJ1 504 aaKnown RBP8.26□□□□□ -1.09
PDPN-205ENST00000487038 LRIG1Q96JA1 1093 aa8.26□□□□□ -1.09
PDPN-205ENST00000487038 ZBTB45Q96K62 511 aaPredicted RBP8.26□□□□□ -1.09
PDPN-205ENST00000487038 RPF1Q9H9Y2 349 aaKnown RBP8.26□□□□□ -1.09
PDPN-205ENST00000487038 TMEM74BQ9NUR3 256 aa8.26□□□□□ -1.09
PDPN-205ENST00000487038 LRWD1Q9UFC0 647 aa8.26□□□□□ -1.09
PDPN-205ENST00000487038 MBD1Q9UIS9 605 aaPredicted RBP8.26□□□□□ -1.09
PDPN-205ENST00000487038 KIAA1024Q9UPX6 916 aa8.26□□□□□ -1.09
PDPN-205ENST00000487038 DNM3Q9UQ16 869 aa8.26□□□□□ -1.09
PDPN-205ENST00000487038 WNT6Q9Y6F9 365 aa8.26□□□□□ -1.09
PDPN-205ENST00000487038 TP53BP1Q12888 1972 aaPredicted RBP8.26□□□□□ -1.09
PDPN-205ENST00000487038 MUC22E2RYF6 1773 aaPredicted RBP8.25□□□□□ -1.09
PDPN-205ENST00000487038 MYH10P35580 1976 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 MYMKA6NI61 221 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 K7EQS6 105 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 WNT7AO00755 349 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 ARHGAP33O14559 1287 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 ZIC2O95409 532 aaPredicted RBP8.25□□□□□ -1.09
PDPN-205ENST00000487038 APODP05090 189 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 FTH1P19P0C7X4 201 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 TCF3P15923 654 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 HMGA1P17096 107 aaKnown RBP8.25□□□□□ -1.09
PDPN-205ENST00000487038 ITPKAP23677 461 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 EIF2DP41214 584 aaKnown RBP8.25□□□□□ -1.09
PDPN-205ENST00000487038 TAF6P49848 677 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 LIG4P49917 911 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 FXR2P51116 673 aaKnown RBP eCLIP8.25□□□□□ -1.09
PDPN-205ENST00000487038 RPL10AP62906 217 aaKnown RBP8.25□□□□□ -1.09
PDPN-205ENST00000487038 ANKRD1Q15327 319 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 NFE2Q16621 373 aaPredicted RBP8.25□□□□□ -1.09
PDPN-205ENST00000487038 SV2CQ496J9 727 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 TRMT11Q7Z4G4 463 aaKnown RBP8.25□□□□□ -1.09
PDPN-205ENST00000487038 NAXDQ8IW45 347 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 CCDC33Q8N5R6 958 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 TXNDC5Q8NBS9 432 aaKnown RBP8.25□□□□□ -1.09
PDPN-205ENST00000487038 SPRYD3Q8NCJ5 442 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 RIN3Q8TB24 985 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 MDM1Q8TC05 714 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 SPATA18Q8TC71 538 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 HMGB4Q8WW32 186 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 SPIRE2Q8WWL2 714 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 RLN3Q8WXF3 142 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 FNBP1Q96RU3 617 aa8.25□□□□□ -1.09
PDPN-205ENST00000487038 UBL7Q96S82 380 aaPredicted RBP8.25□□□□□ -1.09
PDPN-205ENST00000487038 DNAAF2Q9NVR5 837 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms