RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 OSTNP61366 133 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 IRF2BP2Q7Z5L9 587 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 DTX3LQ8TDB6 740 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 C18orf8Q96DM3 657 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 UVRAGQ9P2Y5 699 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 MYH3P11055 1940 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 PITPNM2Q9BZ72 1349 aa12□□□□□ -0.49
U2AF1-209ENST00000475639 UBA6A0AVT1 1052 aaPredicted RBP11.99□□□□□ -0.49
U2AF1-209ENST00000475639 FAM196BA6NMK8 535 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 TBC1D4O60343 1298 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 RARGP13631 454 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 BCAR1P56945 870 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 PLOD1Q02809 727 aaPredicted RBP11.99□□□□□ -0.49
U2AF1-209ENST00000475639 MAPRE1Q15691 268 aaKnown RBP11.99□□□□□ -0.49
U2AF1-209ENST00000475639 HEATR6Q6AI08 1181 aaKnown RBP11.99□□□□□ -0.49
U2AF1-209ENST00000475639 DUS1LQ6P1R4 473 aaKnown RBP11.99□□□□□ -0.49
U2AF1-209ENST00000475639 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.99□□□□□ -0.49
U2AF1-209ENST00000475639 SDR42E1Q8WUS8 393 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 NLRP4Q96MN2 994 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 DPYSL4O14531 572 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 HMOX2P30519 316 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 MOGSQ13724 837 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 MTERF2Q49AM1 385 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 FGD2Q7Z6J4 655 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 THEM5Q8N1Q8 247 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 LCORLQ8N3X6 602 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 DCPSQ96C86 337 aaKnown RBP11.99□□□□□ -0.49
U2AF1-209ENST00000475639 SPON2Q9BUD6 331 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 ROPN1BQ9BZX4 212 aaPredicted RBP11.99□□□□□ -0.49
U2AF1-209ENST00000475639 ROPN1Q9HAT0 212 aaPredicted RBP11.99□□□□□ -0.49
U2AF1-209ENST00000475639 GID8Q9NWU2 228 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 hCG_1984214I3L0E3 225 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 FUT4P22083 530 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 GRK2P25098 689 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 CDK7P50613 346 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 KRT17Q04695 432 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 DHX34Q14147 1143 aaKnown RBP11.99□□□□□ -0.49
U2AF1-209ENST00000475639 TBC1D10BQ4KMP7 808 aaPredicted RBP11.99□□□□□ -0.49
U2AF1-209ENST00000475639 PCYOX1LQ8NBM8 494 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 LENG1Q96BZ8 264 aaPredicted RBP11.99□□□□□ -0.49
U2AF1-209ENST00000475639 CIDEBQ9UHD4 219 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 PCDHA3Q9Y5H8 950 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 NBPF26B4DH59 902 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 CALB1P05937 261 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 HIST1H2AGP0C0S8 130 aaPredicted RBP11.99□□□□□ -0.49
U2AF1-209ENST00000475639 HIST1H2ADP20671 130 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 PTPN4P29074 926 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 SERPINB3P29508 390 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 PTGIRP43119 386 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 PHKA1P46020 1223 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 SF3B3Q15393 1217 aaKnown RBP11.99□□□□□ -0.49
U2AF1-209ENST00000475639 ZNF568Q3ZCX4 644 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 SPDYE7PQ495Y7 208 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 PKN3Q6P5Z2 889 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 CATSPER4Q7RTX7 472 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 HIST1H2AHQ96KK5 128 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 HIST1H2AJQ99878 128 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 H2AFJQ9BTM1 129 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 GANQ9H2C0 597 aa11.99□□□□□ -0.49
U2AF1-209ENST00000475639 DDX43Q9NXZ2 648 aaKnown RBP11.99□□□□□ -0.49
U2AF1-209ENST00000475639 DDX3YO15523 660 aaKnown RBP11.98□□□□□ -0.49
U2AF1-209ENST00000475639 FKBP9O95302 570 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 CBX3Q13185 183 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 SCARA5Q6ZMJ2 495 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 FKBP9P1Q75LS8 142 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 GUF1Q8N442 669 aaKnown RBP11.98□□□□□ -0.49
U2AF1-209ENST00000475639 EFHBQ8N7U6 833 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 SPOCK2Q92563 424 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 C19orf60Q96EN9 201 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 ZNF512BQ96KM6 892 aaPredicted RBP11.98□□□□□ -0.49
U2AF1-209ENST00000475639 CADM1Q9BY67 442 aaKnown RBP11.98□□□□□ -0.49
U2AF1-209ENST00000475639 A0A0J9YVX5 310 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 ZNF211Q13398 564 aaPredicted RBP11.98□□□□□ -0.49
U2AF1-209ENST00000475639 KRR1Q13601 381 aaKnown RBP11.98□□□□□ -0.49
U2AF1-209ENST00000475639 TRIM16LQ309B1 348 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 DNAL1Q4LDG9 190 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 FAM45BPQ6NSW5 357 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 DNAJC10Q8IXB1 793 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 HEMGNQ9BXL5 484 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 SLC13A1Q9BZW2 595 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 KIAA1586Q9HCI6 787 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.98□□□□□ -0.49
U2AF1-209ENST00000475639 PCDHA4Q9UN74 947 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 DDX3XO00571 662 aaKnown RBP eCLIP11.98□□□□□ -0.49
U2AF1-209ENST00000475639 NUP107P57740 925 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 GPC5P78333 572 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 ZBTB33Q86T24 672 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 IFNEQ86WN2 208 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 SCN4BQ8IWT1 228 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 WDR48Q8TAF3 677 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 NAT14Q8WUY8 206 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 RSPH1Q8WYR4 309 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 TRIM63Q969Q1 353 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 MSTO1Q9BUK6 570 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 RPAP3Q9H6T3 665 aaPredicted RBP11.98□□□□□ -0.49
U2AF1-209ENST00000475639 OSGEPQ9NPF4 335 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 AFF4Q9UHB7 1163 aaKnown RBP11.98□□□□□ -0.49
U2AF1-209ENST00000475639 NUMBLQ9Y6R0 609 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 TCP10L2B9ZVM9 353 aa11.98□□□□□ -0.49
U2AF1-209ENST00000475639 ANKRD63C9JTQ0 380 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms