RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 PIRO00625 290 aa20.46■□□□□ 0.87
NCKIPSD-209ENST00000470006 ALDH1A2O94788 518 aa20.46■□□□□ 0.87
NCKIPSD-209ENST00000470006 NFICP08651 508 aa20.46■□□□□ 0.87
NCKIPSD-209ENST00000470006 TRAPPC10P48553 1259 aa20.46■□□□□ 0.87
NCKIPSD-209ENST00000470006 FAM160A1Q05DH4 1040 aa20.46■□□□□ 0.87
NCKIPSD-209ENST00000470006 WSCD1Q658N2 575 aa20.46■□□□□ 0.87
NCKIPSD-209ENST00000470006 CD302Q8IX05 232 aa20.46■□□□□ 0.87
NCKIPSD-209ENST00000470006 SPACA7Q96KW9 195 aa20.46■□□□□ 0.87
NCKIPSD-209ENST00000470006 CNOT6LQ96LI5 555 aaKnown RBP20.46■□□□□ 0.87
NCKIPSD-209ENST00000470006 CYP2S1Q96SQ9 504 aa20.46■□□□□ 0.87
NCKIPSD-209ENST00000470006 UXTQ9UBK9 157 aaPredicted RBP20.46■□□□□ 0.87
NCKIPSD-209ENST00000470006 EVLQ9UI08 416 aaPredicted RBP20.46■□□□□ 0.87
NCKIPSD-209ENST00000470006 CACNA1EQ15878 2313 aa20.45■□□□□ 0.87
NCKIPSD-209ENST00000470006 PI4KAP42356 2102 aa20.45■□□□□ 0.86
NCKIPSD-209ENST00000470006 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.45■□□□□ 0.86
NCKIPSD-209ENST00000470006 USP17L7P0C7H9 530 aa20.45■□□□□ 0.86
NCKIPSD-209ENST00000470006 ENGP17813 658 aa20.45■□□□□ 0.86
NCKIPSD-209ENST00000470006 TAF6P49848 677 aa20.45■□□□□ 0.86
NCKIPSD-209ENST00000470006 TSPY1Q01534 308 aa20.45■□□□□ 0.86
NCKIPSD-209ENST00000470006 EML3Q32P44 896 aa20.45■□□□□ 0.86
NCKIPSD-209ENST00000470006 TMEFF1Q8IYR6 380 aa20.45■□□□□ 0.86
NCKIPSD-209ENST00000470006 HDDC3Q8N4P3 179 aa20.45■□□□□ 0.86
NCKIPSD-209ENST00000470006 MDGA1Q8NFP4 955 aa20.45■□□□□ 0.86
NCKIPSD-209ENST00000470006 USP33Q8TEY7 942 aa20.45■□□□□ 0.86
NCKIPSD-209ENST00000470006 RLN3Q8WXF3 142 aa20.45■□□□□ 0.86
NCKIPSD-209ENST00000470006 PLIN2Q99541 437 aa20.45■□□□□ 0.86
NCKIPSD-209ENST00000470006 BCCIPQ9P287 314 aaKnown RBP eCLIP20.45■□□□□ 0.86
NCKIPSD-209ENST00000470006 LARSQ9P2J5 1176 aaKnown RBP20.45■□□□□ 0.86
NCKIPSD-209ENST00000470006 NPHP3-ACAD11A0A0J9YXS1 232 aa20.44■□□□□ 0.86
NCKIPSD-209ENST00000470006 CFIP05156 583 aa20.44■□□□□ 0.86
NCKIPSD-209ENST00000470006 ZNF77Q15935 545 aa20.44■□□□□ 0.86
NCKIPSD-209ENST00000470006 C19orf48Q6RUI8 117 aa20.44■□□□□ 0.86
NCKIPSD-209ENST00000470006 DTHD1Q6ZMT9 781 aa20.44■□□□□ 0.86
NCKIPSD-209ENST00000470006 RASSF3Q86WH2 238 aa20.44■□□□□ 0.86
NCKIPSD-209ENST00000470006 EFCAB13Q8IY85 973 aa20.44■□□□□ 0.86
NCKIPSD-209ENST00000470006 GTPBP2Q9BX10 602 aaKnown RBP20.44■□□□□ 0.86
NCKIPSD-209ENST00000470006 TAF4O00268 1085 aa20.43■□□□□ 0.86
NCKIPSD-209ENST00000470006 ANAPC15P60006 121 aa20.43■□□□□ 0.86
NCKIPSD-209ENST00000470006 RPL10AP62906 217 aaKnown RBP20.43■□□□□ 0.86
NCKIPSD-209ENST00000470006 DDR2Q16832 855 aa20.43■□□□□ 0.86
NCKIPSD-209ENST00000470006 LMBRD2Q68DH5 695 aaPredicted RBP20.43■□□□□ 0.86
NCKIPSD-209ENST00000470006 SYT12Q8IV01 421 aa20.43■□□□□ 0.86
NCKIPSD-209ENST00000470006 PGBD3Q8N328 593 aa20.43■□□□□ 0.86
NCKIPSD-209ENST00000470006 SYT2Q8N9I0 419 aaPredicted RBP20.43■□□□□ 0.86
NCKIPSD-209ENST00000470006 CDK5RAP3Q96JB5 506 aa20.43■□□□□ 0.86
NCKIPSD-209ENST00000470006 LINC00597Q9H2U6 94 aa20.43■□□□□ 0.86
NCKIPSD-209ENST00000470006 TMEM206Q9H813 350 aa20.43■□□□□ 0.86
NCKIPSD-209ENST00000470006 TMLHEQ9NVH6 421 aa20.43■□□□□ 0.86
NCKIPSD-209ENST00000470006 DPP3Q9NY33 737 aa20.43■□□□□ 0.86
NCKIPSD-209ENST00000470006 MMP17Q9ULZ9 603 aa20.43■□□□□ 0.86
NCKIPSD-209ENST00000470006 ATXN2Q99700 1313 aaKnown RBP20.43■□□□□ 0.86
NCKIPSD-209ENST00000470006 ITPR1Q14643 2758 aa20.43■□□□□ 0.86
NCKIPSD-209ENST00000470006 ANO9A1A5B4 782 aa20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 H0Y626 953 aa20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 K7EQS6 105 aa20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 TNFRSF10BO14763 440 aa20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 TRIM16O95361 564 aa20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 NFATC1O95644 943 aa20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 ADRB2P07550 413 aa20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 NEK4P51957 841 aa20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 NCKAP1LP55160 1127 aa20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 KCNB1Q14721 858 aa20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 CRY1Q16526 586 aa20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 NFE2Q16621 373 aaPredicted RBP20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 CHCHD4Q8N4Q1 142 aa20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 ARL14EPQ8N8R7 260 aaPredicted RBP20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 SH3RF2Q8TEC5 729 aa20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 SLC22A12Q96S37 553 aa20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 MMTAG2Q9BU76 263 aaKnown RBP20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 TMEM74BQ9NUR3 256 aa20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 CPSF3Q9UKF6 684 aaKnown RBP20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 DERAQ9Y315 318 aa20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 PCDHB6Q9Y5E3 794 aa20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 ADAMTS20P59510 1910 aa20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 ADAMTS9Q9P2N4 1935 aa20.42■□□□□ 0.86
NCKIPSD-209ENST00000470006 K7ENM7 598 aa20.41■□□□□ 0.86
NCKIPSD-209ENST00000470006 FAM189A1O60320 539 aa20.41■□□□□ 0.86
NCKIPSD-209ENST00000470006 PLA2G4BP0C869 781 aa20.41■□□□□ 0.86
NCKIPSD-209ENST00000470006 PTGER3P43115 390 aa20.41■□□□□ 0.86
NCKIPSD-209ENST00000470006 ACOT2P49753 483 aa20.41■□□□□ 0.86
NCKIPSD-209ENST00000470006 LYSMD4Q5XG99 296 aa20.41■□□□□ 0.86
NCKIPSD-209ENST00000470006 MYCT1Q8N699 235 aa20.41■□□□□ 0.86
NCKIPSD-209ENST00000470006 FSIP1Q8NA03 581 aa20.41■□□□□ 0.86
NCKIPSD-209ENST00000470006 WHAMMQ8TF30 809 aa20.41■□□□□ 0.86
NCKIPSD-209ENST00000470006 POLMQ9NP87 494 aaPredicted RBP20.41■□□□□ 0.86
NCKIPSD-209ENST00000470006 FSCN3Q9NQT6 498 aa20.41■□□□□ 0.86
NCKIPSD-209ENST00000470006 A0A0B4J269 797 aa20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 ANTXRLA6NF34 631 aa20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 KPNA7A9QM74 516 aa20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 TADA3O75528 432 aa20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 CYP2F1P24903 491 aa20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 DPP6P42658 865 aa20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 USP4Q13107 963 aa20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 BYSLQ13895 437 aaKnown RBP20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 IL17AQ16552 155 aa20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 SV2CQ496J9 727 aa20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 ZC2HC1CQ53FD0 456 aaPredicted RBP20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 TMEM92Q6UXU6 159 aa20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 CCDC83Q8IWF9 413 aa20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 SCN4BQ8IWT1 228 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms