RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 TAF1DQ9H5J8 278 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 MRPL44Q9H9J2 332 aaKnown RBP3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 RNPEPL1Q9HAU8 725 aa3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 PFDN4Q9NQP4 134 aa3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 PRDM11Q9NQV5 511 aa3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 GPATCH2Q9NW75 528 aa3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 C14orf119Q9NWQ9 140 aa3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 MOCS1Q9NZB8 636 aa3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 H2AFY2Q9P0M6 372 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 CTTNBP2NLQ9P2B4 639 aa3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 PPARGC1AQ9UBK2 798 aaKnown RBP3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 BAIAP2L1Q9UHR4 511 aa3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 XPO7Q9UIA9 1087 aaKnown RBP3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 PALD1Q9ULE6 856 aa3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 KIAA1257Q9ULG3 409 aa3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 ZBTB21Q9ULJ3 1066 aa3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 TMCC3Q9ULS5 477 aa3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 CBLCQ9ULV8 474 aa3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 HEY1Q9Y5J3 304 aa3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 NOX1Q9Y5S8 564 aa3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 CAPN6Q9Y6Q1 641 aa3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 SCINQ9Y6U3 715 aa3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 GAKO14976 1311 aa3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 MYH6P13533 1939 aa3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 PLCH2O75038 1416 aa3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 VWDEQ8N2E2 1590 aa3.85□□□□□ -1.79
HMGB3P8-201ENST00000449709 ZCCHC11Q5TAX3 1644 aaKnown RBP3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 PARP4Q9UKK3 1724 aaKnown RBP3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 MAP2P11137 1827 aaKnown RBP3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 TRBV23OR9-2A0A075B6M9 112 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 FAM95CA0A1B0GW59 222 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 HMX2A2RU54 273 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 CTAGE9A4FU28 777 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 TRIM75PA6NK02 468 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 TMEM114B3SHH9 223 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 M0QX08 132 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 SLC22A1O15245 554 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 SPTLC2O15270 562 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 DHX15O43143 795 aaKnown RBP3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 HNRNPRO43390 633 aaKnown RBP3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 AP1G1O43747 822 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 ORC4O43929 436 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 PCDHGA12O60330 932 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 OXSR1O95747 527 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 OLFM2O95897 454 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 CFBP00751 764 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 LTFP02788 710 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 HNRNPCP07910 306 aaKnown RBP eCLIP3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 GSTM1P09488 218 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 FAM87AP0C7U9 286 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 ZBTB48P10074 688 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 PCP11498 1178 aaKnown RBP3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 CDK4P11802 303 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 COL6A2P12110 1019 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 BMP3P12645 472 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 CTRB1P17538 263 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 PAMP19021 973 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 PDCP20941 246 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 LPOP22079 712 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 TBXAS1P24557 533 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 GRK2P25098 689 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 PSMA3P25788 255 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 TMOD1P28289 359 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 GRK3P35626 688 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 PDE6BP35913 854 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 SLC16A2P36021 539 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 PBX1P40424 430 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 RGS2P41220 211 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 CDK7P50613 346 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 ALDH5A1P51649 535 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 EPHB4P54760 987 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 POLE2P56282 527 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 RPL26P61254 145 aaKnown RBP3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 TMF1P82094 1093 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 DR1Q01658 176 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 KIF23Q02241 960 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 CREB5Q02930 508 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 BNIP1Q12981 228 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 RESTQ13127 1097 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 GTF2H3Q13889 308 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 LRRC32Q14392 662 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 GBX1Q14549 363 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 KPNB1Q14974 876 aaKnown RBP3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 CLEC16AQ2KHT3 1053 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 LIN52Q52LA3 116 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 CCNJQ5T5M9 372 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 CFAP58Q5T655 872 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 AGBL2Q5U5Z8 902 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 BROXQ5VW32 411 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 BTBD8Q5XKL5 378 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 MBLAC2Q68D91 279 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 CTRB2Q6GPI1 263 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 TWF2Q6IBS0 349 aaKnown RBP3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 GRAMD4Q6IC98 578 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 SNRNP48Q6IEG0 339 aaKnown RBP3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 TMEM154Q6P9G4 183 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 PGM2L1Q6PCE3 622 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 TTC23LQ6PF05 361 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 BORAQ6PGQ7 559 aa3.84□□□□□ -1.79
HMGB3P8-201ENST00000449709 TOGARAM2Q6ZUX3 1019 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms