RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 C2CD4DB7Z1M9 353 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 RFPL2O75678 378 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 POU2F2P09086 479 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 CPB1P15086 417 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 ATF2P15336 505 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 CD58P19256 250 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 RFX1P22670 979 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 ASPAP45381 313 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 RAP1GAPP47736 663 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 GCNT1Q02742 428 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 SMARCB1Q12824 385 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 NR1I3Q14994 352 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 MAPRE1Q15691 268 aaKnown RBP9.78□□□□□ -0.84
RFX3-207ENST00000449190 ARHGAP44Q17R89 818 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 TMEM31Q5JXX7 168 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 TPGS2Q68CL5 300 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 TRIM65Q6PJ69 517 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 RRAGAQ7L523 313 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 LIMS2Q7Z4I7 341 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 LMO3Q8TAP4 145 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 EDAQ92838 391 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 ELMO3Q96BJ8 720 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 NAP1L5Q96NT1 182 aaPredicted RBP9.78□□□□□ -0.84
RFX3-207ENST00000449190 MRPL45Q9BRJ2 306 aaKnown RBP9.78□□□□□ -0.84
RFX3-207ENST00000449190 BCO2Q9BYV7 579 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 TRIM5Q9C035 493 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 PLCB1Q9NQ66 1216 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 CISHQ9NSE2 258 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 CDH9Q9ULB4 789 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 PCDHB4Q9Y5E5 795 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 NCOR1O75376 2440 aa9.78□□□□□ -0.84
RFX3-207ENST00000449190 TRIP11Q15643 1979 aa9.77□□□□□ -0.84
RFX3-207ENST00000449190 A0A1W2PQC6 194 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 GABRDO14764 452 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 TEX33O43247 280 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 XYLBO75191 536 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 LRRN2O75325 713 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 C8AP07357 584 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 KRT5P13647 590 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 USP8P40818 1118 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 NDST1P52848 882 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 ZXDAP98168 799 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 ROR1Q01973 937 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 KCNMA1Q12791 1236 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 RAPGEF1Q13905 1077 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 NFE2Q16621 373 aaPredicted RBP9.77□□□□□ -0.85
RFX3-207ENST00000449190 KLHDC7AQ5VTJ3 777 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 SMYD5Q6GMV2 418 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 PHLDB3Q6NSJ2 640 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 C4orf50Q6ZRC1 276 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 APTXQ7Z2E3 356 aaKnown RBP9.77□□□□□ -0.85
RFX3-207ENST00000449190 CACNA2D4Q7Z3S7 1137 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 GAS2L3Q86XJ1 694 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 ARHGEF19Q8IW93 802 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 TCEAL8Q8IYN2 117 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 TDRD5Q8NAT2 981 aaKnown RBP9.77□□□□□ -0.85
RFX3-207ENST00000449190 FEZF2Q8TBJ5 459 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 KBTBD7Q8WVZ9 684 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 HEXIM2Q96MH2 286 aaKnown RBP9.77□□□□□ -0.85
RFX3-207ENST00000449190 ERGIC2Q96RQ1 377 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 SYT15Q9BQS2 421 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 LRFN3Q9BTN0 628 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 NUP58Q9BVL2 599 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 NT5C1AQ9BXI3 368 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 ZCWPW1Q9H0M4 648 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 FAM207AQ9NSI2 230 aaPredicted RBP9.77□□□□□ -0.85
RFX3-207ENST00000449190 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.77□□□□□ -0.85
RFX3-207ENST00000449190 LIMD1Q9UGP4 676 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 AFF4Q9UHB7 1163 aaKnown RBP9.77□□□□□ -0.85
RFX3-207ENST00000449190 MUTYHQ9UIF7 546 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 DNAJC12Q9UKB3 198 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 KIAA1257Q9ULG3 409 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 ATP8B3O60423 1300 aa9.77□□□□□ -0.85
RFX3-207ENST00000449190 WDR27A2RRH5 827 aa9.76□□□□□ -0.85
RFX3-207ENST00000449190 PRR33A8MZF0 331 aa9.76□□□□□ -0.85
RFX3-207ENST00000449190 CILPO75339 1184 aa9.76□□□□□ -0.85
RFX3-207ENST00000449190 TPM1P09493 284 aa9.76□□□□□ -0.85
RFX3-207ENST00000449190 PTPN1P18031 435 aaKnown RBP9.76□□□□□ -0.85
RFX3-207ENST00000449190 ACAT1P24752 427 aaKnown RBP9.76□□□□□ -0.85
RFX3-207ENST00000449190 LMO2P25791 158 aa9.76□□□□□ -0.85
RFX3-207ENST00000449190 BPIFB4P59827 614 aa9.76□□□□□ -0.85
RFX3-207ENST00000449190 POLR2FP61218 127 aaKnown RBP9.76□□□□□ -0.85
RFX3-207ENST00000449190 INCA1Q0VD86 236 aa9.76□□□□□ -0.85
RFX3-207ENST00000449190 GPR17Q13304 367 aa9.76□□□□□ -0.85
RFX3-207ENST00000449190 PTPN21Q16825 1174 aa9.76□□□□□ -0.85
RFX3-207ENST00000449190 SLC39A12Q504Y0 691 aa9.76□□□□□ -0.85
RFX3-207ENST00000449190 ZNF394Q53GI3 561 aa9.76□□□□□ -0.85
RFX3-207ENST00000449190 INTS6LQ5JSJ4 861 aaKnown RBP9.76□□□□□ -0.85
RFX3-207ENST00000449190 GJB7Q6PEY0 223 aa9.76□□□□□ -0.85
RFX3-207ENST00000449190 OSTM1Q86WC4 334 aa9.76□□□□□ -0.85
RFX3-207ENST00000449190 SPATA2LQ8IUW3 424 aaPredicted RBP9.76□□□□□ -0.85
RFX3-207ENST00000449190 FMNL3Q8IVF7 1028 aa9.76□□□□□ -0.85
RFX3-207ENST00000449190 ZNF397Q8NF99 534 aaPredicted RBP9.76□□□□□ -0.85
RFX3-207ENST00000449190 SLC7A14Q8TBB6 771 aa9.76□□□□□ -0.85
RFX3-207ENST00000449190 C2orf15Q8WU43 125 aaKnown RBP9.76□□□□□ -0.85
RFX3-207ENST00000449190 SPOCK2Q92563 424 aa9.76□□□□□ -0.85
RFX3-207ENST00000449190 NXPE3Q969Y0 559 aa9.76□□□□□ -0.85
RFX3-207ENST00000449190 IQCDQ96DY2 449 aa9.76□□□□□ -0.85
RFX3-207ENST00000449190 TMEM176AQ96HP8 235 aa9.76□□□□□ -0.85
RFX3-207ENST00000449190 SPAG5Q96R06 1193 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms