RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 CNPP09543 421 aaKnown RBP15.53■□□□□ 0.08
SHANK2-210ENST00000449116 FECHP22830 423 aa15.53■□□□□ 0.08
SHANK2-210ENST00000449116 ADORA2BP29275 332 aa15.53■□□□□ 0.08
SHANK2-210ENST00000449116 CYP27A1Q02318 531 aa15.53■□□□□ 0.08
SHANK2-210ENST00000449116 MAPK8IP2Q13387 824 aaPredicted RBP15.53■□□□□ 0.08
SHANK2-210ENST00000449116 RAB33AQ14088 237 aa15.53■□□□□ 0.08
SHANK2-210ENST00000449116 GOLGA7BQ2TAP0 167 aa15.53■□□□□ 0.08
SHANK2-210ENST00000449116 LCLAT1Q6UWP7 414 aa15.53■□□□□ 0.08
SHANK2-210ENST00000449116 ZNF571Q7Z3V5 609 aaPredicted RBP15.53■□□□□ 0.08
SHANK2-210ENST00000449116 VPS36Q86VN1 386 aa15.53■□□□□ 0.08
SHANK2-210ENST00000449116 GLYCTKQ8IVS8 523 aa15.53■□□□□ 0.08
SHANK2-210ENST00000449116 LRRC8AQ8IWT6 810 aa15.53■□□□□ 0.08
SHANK2-210ENST00000449116 FUKQ8N0W3 1084 aa15.53■□□□□ 0.08
SHANK2-210ENST00000449116 C2orf15Q8WU43 125 aaKnown RBP15.53■□□□□ 0.08
SHANK2-210ENST00000449116 KLHL5Q96PQ7 755 aa15.53■□□□□ 0.08
SHANK2-210ENST00000449116 CHP1Q99653 195 aa15.53■□□□□ 0.08
SHANK2-210ENST00000449116 BAG1Q99933 345 aaPredicted RBP15.53■□□□□ 0.08
SHANK2-210ENST00000449116 SYT11Q9BT88 431 aa15.53■□□□□ 0.08
SHANK2-210ENST00000449116 MED10Q9BTT4 135 aa15.53■□□□□ 0.08
SHANK2-210ENST00000449116 B3GNT5Q9BYG0 378 aa15.53■□□□□ 0.08
SHANK2-210ENST00000449116 PDCL3Q9H2J4 239 aa15.53■□□□□ 0.08
SHANK2-210ENST00000449116 PCDHGC3Q9UN70 934 aa15.53■□□□□ 0.08
SHANK2-210ENST00000449116 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.53■□□□□ 0.08
SHANK2-210ENST00000449116 TRIOBPQ9H2D6 2365 aa15.52■□□□□ 0.08
SHANK2-210ENST00000449116 SSU72P8A0A1W2PR75 194 aa15.52■□□□□ 0.08
SHANK2-210ENST00000449116 WDR27A2RRH5 827 aa15.52■□□□□ 0.08
SHANK2-210ENST00000449116 MTMR11A4FU01 709 aa15.52■□□□□ 0.08
SHANK2-210ENST00000449116 MICAL2O94851 1124 aa15.52■□□□□ 0.08
SHANK2-210ENST00000449116 ADH1AP07327 375 aa15.52■□□□□ 0.08
SHANK2-210ENST00000449116 MMEP08473 750 aa15.52■□□□□ 0.08
SHANK2-210ENST00000449116 PLEKP08567 350 aaPredicted RBP15.52■□□□□ 0.08
SHANK2-210ENST00000449116 CHRNB2P17787 502 aa15.52■□□□□ 0.08
SHANK2-210ENST00000449116 ANXA13P27216 316 aa15.52■□□□□ 0.08
SHANK2-210ENST00000449116 FMO1Q01740 532 aa15.52■□□□□ 0.08
SHANK2-210ENST00000449116 PTPROQ16827 1216 aa15.52■□□□□ 0.08
SHANK2-210ENST00000449116 TPGS2Q68CL5 300 aa15.52■□□□□ 0.08
SHANK2-210ENST00000449116 CYP26C1Q6V0L0 522 aa15.52■□□□□ 0.08
SHANK2-210ENST00000449116 FAM35AQ86V20 835 aa15.52■□□□□ 0.08
SHANK2-210ENST00000449116 TMTC1Q8IUR5 882 aa15.52■□□□□ 0.08
SHANK2-210ENST00000449116 SPATA2LQ8IUW3 424 aaPredicted RBP15.52■□□□□ 0.08
SHANK2-210ENST00000449116 CCDC112Q8NEF3 446 aa15.52■□□□□ 0.08
SHANK2-210ENST00000449116 FUBP3Q96I24 572 aaKnown RBP eCLIP15.52■□□□□ 0.08
SHANK2-210ENST00000449116 ZNF518BQ9C0D4 1074 aa15.52■□□□□ 0.08
SHANK2-210ENST00000449116 NHEJ1Q9H9Q4 299 aaPredicted RBP15.52■□□□□ 0.08
SHANK2-210ENST00000449116 HESX1Q9UBX0 185 aa15.52■□□□□ 0.08
SHANK2-210ENST00000449116 AFF4Q9UHB7 1163 aaKnown RBP15.52■□□□□ 0.08
SHANK2-210ENST00000449116 PCDHB5Q9Y5E4 795 aa15.52■□□□□ 0.08
SHANK2-210ENST00000449116 PCDHGC5Q9Y5F6 944 aa15.52■□□□□ 0.08
SHANK2-210ENST00000449116 M0QYV0 167 aa15.51■□□□□ 0.07
SHANK2-210ENST00000449116 RFXAPO00287 272 aa15.51■□□□□ 0.07
SHANK2-210ENST00000449116 CLDN5O00501 218 aa15.51■□□□□ 0.07
SHANK2-210ENST00000449116 ABLIM3O94929 683 aa15.51■□□□□ 0.07
SHANK2-210ENST00000449116 CFHP08603 1231 aa15.51■□□□□ 0.07
SHANK2-210ENST00000449116 TNFAIP3P21580 790 aa15.51■□□□□ 0.07
SHANK2-210ENST00000449116 SSTR3P32745 418 aaPredicted RBP15.51■□□□□ 0.07
SHANK2-210ENST00000449116 EIF4A3P38919 411 aaKnown RBP15.51■□□□□ 0.07
SHANK2-210ENST00000449116 CFAP221Q4G0U5 840 aa15.51■□□□□ 0.07
SHANK2-210ENST00000449116 TRIM72Q6ZMU5 477 aa15.51■□□□□ 0.07
SHANK2-210ENST00000449116 RNF19BQ6ZMZ0 732 aa15.51■□□□□ 0.07
SHANK2-210ENST00000449116 PAQR9Q6ZVX9 377 aa15.51■□□□□ 0.07
SHANK2-210ENST00000449116 TMEM139Q8IV31 216 aa15.51■□□□□ 0.07
SHANK2-210ENST00000449116 ANKRD52Q8NB46 1076 aa15.51■□□□□ 0.07
SHANK2-210ENST00000449116 ZNF461Q8TAF7 563 aa15.51■□□□□ 0.07
SHANK2-210ENST00000449116 SPPL2BQ8TCT7 592 aa15.51■□□□□ 0.07
SHANK2-210ENST00000449116 SMARCD1Q96GM5 515 aa15.51■□□□□ 0.07
SHANK2-210ENST00000449116 CCDC42Q96M95 316 aa15.51■□□□□ 0.07
SHANK2-210ENST00000449116 PGLYRP2Q96PD5 576 aa15.51■□□□□ 0.07
SHANK2-210ENST00000449116 LHX5Q9H2C1 402 aa15.51■□□□□ 0.07
SHANK2-210ENST00000449116 DEF6Q9H4E7 631 aa15.51■□□□□ 0.07
SHANK2-210ENST00000449116 ABCB6Q9NP58 842 aa15.51■□□□□ 0.07
SHANK2-210ENST00000449116 KRT82Q9NSB4 513 aa15.51■□□□□ 0.07
SHANK2-210ENST00000449116 SEPT11Q9NVA2 429 aaKnown RBP15.51■□□□□ 0.07
SHANK2-210ENST00000449116 ABI2Q9NYB9 513 aaPredicted RBP15.51■□□□□ 0.07
SHANK2-210ENST00000449116 CEP83Q9Y592 693 aa15.51■□□□□ 0.07
SHANK2-210ENST00000449116 SOX1O00570 391 aaPredicted RBP15.5■□□□□ 0.07
SHANK2-210ENST00000449116 NRDCO43847 1150 aa15.5■□□□□ 0.07
SHANK2-210ENST00000449116 LSM8O95777 96 aaKnown RBP15.5■□□□□ 0.07
SHANK2-210ENST00000449116 FAM200BP0CF97 657 aa15.5■□□□□ 0.07
SHANK2-210ENST00000449116 NPR3P17342 541 aa15.5■□□□□ 0.07
SHANK2-210ENST00000449116 BDNFP23560 247 aa15.5■□□□□ 0.07
SHANK2-210ENST00000449116 KLRC2P26717 231 aa15.5■□□□□ 0.07
SHANK2-210ENST00000449116 CDR1P51861 262 aa15.5■□□□□ 0.07
SHANK2-210ENST00000449116 BCAT1P54687 386 aa15.5■□□□□ 0.07
SHANK2-210ENST00000449116 SLC8A3P57103 927 aa15.5■□□□□ 0.07
SHANK2-210ENST00000449116 ADCY1Q08828 1119 aa15.5■□□□□ 0.07
SHANK2-210ENST00000449116 BST2Q10589 180 aaKnown RBP15.5■□□□□ 0.07
SHANK2-210ENST00000449116 ASTE1Q2TB18 679 aaPredicted RBP15.5■□□□□ 0.07
SHANK2-210ENST00000449116 PKDCCQ504Y2 493 aa15.5■□□□□ 0.07
SHANK2-210ENST00000449116 VSTM1Q6UX27 236 aa15.5■□□□□ 0.07
SHANK2-210ENST00000449116 TTC30AQ86WT1 665 aa15.5■□□□□ 0.07
SHANK2-210ENST00000449116 PALB2Q86YC2 1186 aa15.5■□□□□ 0.07
SHANK2-210ENST00000449116 PASD1Q8IV76 773 aa15.5■□□□□ 0.07
SHANK2-210ENST00000449116 CCDC170Q8IYT3 715 aa15.5■□□□□ 0.07
SHANK2-210ENST00000449116 ATAD1Q8NBU5 361 aa15.5■□□□□ 0.07
SHANK2-210ENST00000449116 OLIG1Q8TAK6 271 aa15.5■□□□□ 0.07
SHANK2-210ENST00000449116 UBA3Q8TBC4 463 aa15.5■□□□□ 0.07
SHANK2-210ENST00000449116 MRPL38Q96DV4 380 aaKnown RBP15.5■□□□□ 0.07
SHANK2-210ENST00000449116 PCDHB18PQ96TA0 734 aa15.5■□□□□ 0.07
SHANK2-210ENST00000449116 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.5■□□□□ 0.074e-6■□□□□ 8.1
SHANK2-210ENST00000449116 DUSP16Q9BY84 665 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms