RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 PON2Q15165 354 aa22.55■■□□□ 1.2
VSX1-206ENST00000444511 CCDC142Q17RM4 750 aa22.55■■□□□ 1.2
VSX1-206ENST00000444511 CFAP221Q4G0U5 840 aa22.55■■□□□ 1.2
VSX1-206ENST00000444511 UNC13DQ70J99 1090 aa22.55■■□□□ 1.2
VSX1-206ENST00000444511 MON1AQ86VX9 555 aa22.55■■□□□ 1.2
VSX1-206ENST00000444511 SCN4BQ8IWT1 228 aa22.55■■□□□ 1.2
VSX1-206ENST00000444511 RDH13Q8NBN7 331 aa22.55■■□□□ 1.2
VSX1-206ENST00000444511 USP13Q92995 863 aaPredicted RBP22.55■■□□□ 1.2
VSX1-206ENST00000444511 FUBP3Q96I24 572 aaKnown RBP eCLIP22.55■■□□□ 1.2
VSX1-206ENST00000444511 KIF9Q9HAQ2 790 aa22.55■■□□□ 1.2
VSX1-206ENST00000444511 AGPAT3Q9NRZ7 376 aa22.55■■□□□ 1.2
VSX1-206ENST00000444511 GKN1Q9NS71 199 aa22.55■■□□□ 1.2
VSX1-206ENST00000444511 TDP1Q9NUW8 608 aa22.55■■□□□ 1.2
VSX1-206ENST00000444511 FAM13BQ9NYF5 915 aa22.55■■□□□ 1.2
VSX1-206ENST00000444511 CCL26Q9Y258 94 aa22.55■■□□□ 1.2
VSX1-206ENST00000444511 UBE4BO95155 1302 aa22.55■■□□□ 1.2
VSX1-206ENST00000444511 SOBPA7XYQ1 873 aa22.54■■□□□ 1.2
VSX1-206ENST00000444511 NOL4O94818 638 aa22.54■■□□□ 1.2
VSX1-206ENST00000444511 F13A1P00488 732 aa22.54■■□□□ 1.2
VSX1-206ENST00000444511 DLATP10515 647 aaKnown RBP22.54■■□□□ 1.2
VSX1-206ENST00000444511 ME1P48163 572 aa22.54■■□□□ 1.2
VSX1-206ENST00000444511 CYP2J2P51589 502 aa22.54■■□□□ 1.2
VSX1-206ENST00000444511 SNRNP35Q16560 246 aaKnown RBP22.54■■□□□ 1.2
VSX1-206ENST00000444511 C4orf50Q6ZRC1 276 aa22.54■■□□□ 1.2
VSX1-206ENST00000444511 Q6ZS52 159 aa22.54■■□□□ 1.2
VSX1-206ENST00000444511 HS2ST1Q7LGA3 356 aa22.54■■□□□ 1.2
VSX1-206ENST00000444511 NELFCDQ8IXH7 590 aa22.54■■□□□ 1.2
VSX1-206ENST00000444511 RMDN1Q96DB5 314 aa22.54■■□□□ 1.2
VSX1-206ENST00000444511 TRMT2BQ96GJ1 504 aaKnown RBP22.54■■□□□ 1.2
VSX1-206ENST00000444511 FNBP1Q96RU3 617 aa22.54■■□□□ 1.2
VSX1-206ENST00000444511 SYT15Q9BQS2 421 aa22.54■■□□□ 1.2
VSX1-206ENST00000444511 BLZF1Q9H2G9 400 aa22.54■■□□□ 1.2
VSX1-206ENST00000444511 ZNF292O60281 2723 aa22.53■■□□□ 1.2
VSX1-206ENST00000444511 CLIC2O15247 247 aa22.53■■□□□ 1.2
VSX1-206ENST00000444511 TGFB1I1O43294 461 aa22.53■■□□□ 1.2
VSX1-206ENST00000444511 TNNI1P19237 187 aa22.53■■□□□ 1.2
VSX1-206ENST00000444511 CC2D1AQ6P1N0 951 aaPredicted RBP22.53■■□□□ 1.2
VSX1-206ENST00000444511 TRAPPC11Q7Z392 1133 aa22.53■■□□□ 1.2
VSX1-206ENST00000444511 KBTBD7Q8WVZ9 684 aa22.53■■□□□ 1.2
VSX1-206ENST00000444511 MMS19Q96T76 1030 aa22.53■■□□□ 1.2
VSX1-206ENST00000444511 CDH9Q9ULB4 789 aa22.53■■□□□ 1.2
VSX1-206ENST00000444511 RAB23Q9ULC3 237 aa22.53■■□□□ 1.2
VSX1-206ENST00000444511 OTOGLQ3ZCN5 2332 aa22.53■■□□□ 1.2
VSX1-206ENST00000444511 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.52■■□□□ 1.2
VSX1-206ENST00000444511 ATP2C2O75185 946 aa22.52■■□□□ 1.2
VSX1-206ENST00000444511 CASP1P29466 404 aa22.52■■□□□ 1.2
VSX1-206ENST00000444511 PSMC1P62191 440 aaKnown RBP22.52■■□□□ 1.2
VSX1-206ENST00000444511 SNRPFP62306 86 aaKnown RBP22.52■■□□□ 1.2
VSX1-206ENST00000444511 RUNX3Q13761 415 aa22.52■■□□□ 1.2
VSX1-206ENST00000444511 MAPRE1Q15691 268 aaKnown RBP22.52■■□□□ 1.2
VSX1-206ENST00000444511 WDR44Q5JSH3 913 aa22.52■■□□□ 1.2
VSX1-206ENST00000444511 FAM171BQ6P995 826 aa22.52■■□□□ 1.2
VSX1-206ENST00000444511 LIMS2Q7Z4I7 341 aa22.52■■□□□ 1.2
VSX1-206ENST00000444511 GPR161Q8N6U8 529 aaKnown RBP22.52■■□□□ 1.2
VSX1-206ENST00000444511 XXYLT1Q8NBI6 393 aa22.52■■□□□ 1.2
VSX1-206ENST00000444511 SCFD1Q8WVM8 642 aa22.52■■□□□ 1.2
VSX1-206ENST00000444511 CCDC127Q96BQ5 260 aa22.52■■□□□ 1.2
VSX1-206ENST00000444511 MYRFLQ96LU7 910 aa22.52■■□□□ 1.2
VSX1-206ENST00000444511 FAM83CQ9BQN1 747 aa22.52■■□□□ 1.2
VSX1-206ENST00000444511 TRPC7Q9HCX4 862 aa22.52■■□□□ 1.2
VSX1-206ENST00000444511 MAGEC2Q9UBF1 373 aaPredicted RBP22.52■■□□□ 1.2
VSX1-206ENST00000444511 GMEB2Q9UKD1 530 aa22.52■■□□□ 1.2
VSX1-206ENST00000444511 PCDHA7Q9UN72 937 aa22.52■■□□□ 1.2
VSX1-206ENST00000444511 TADA3O75528 432 aa22.51■■□□□ 1.19
VSX1-206ENST00000444511 WARSP23381 471 aaKnown RBP22.51■■□□□ 1.19
VSX1-206ENST00000444511 LMO2P25791 158 aa22.51■■□□□ 1.19
VSX1-206ENST00000444511 MAGEA11P43364 429 aa22.51■■□□□ 1.19
VSX1-206ENST00000444511 EHHADHQ08426 723 aa22.51■■□□□ 1.19
VSX1-206ENST00000444511 CCINQ13939 588 aa22.51■■□□□ 1.19
VSX1-206ENST00000444511 ZNF268Q14587 947 aaPredicted RBP22.51■■□□□ 1.19
VSX1-206ENST00000444511 PSMD6Q15008 389 aa22.51■■□□□ 1.19
VSX1-206ENST00000444511 TRIM68Q6AZZ1 485 aa22.51■■□□□ 1.19
VSX1-206ENST00000444511 ATL3Q6DD88 541 aa22.51■■□□□ 1.19
VSX1-206ENST00000444511 SYNPOQ8N3V7 929 aa22.51■■□□□ 1.19
VSX1-206ENST00000444511 MYLPFQ96A32 169 aa22.51■■□□□ 1.19
VSX1-206ENST00000444511 CGRRF1Q99675 332 aa22.51■■□□□ 1.19
VSX1-206ENST00000444511 EBF3Q9H4W6 596 aa22.51■■□□□ 1.19
VSX1-206ENST00000444511 HPS4Q9NQG7 708 aa22.51■■□□□ 1.19
VSX1-206ENST00000444511 CFAP45Q9UL16 551 aa22.51■■□□□ 1.19
VSX1-206ENST00000444511 PAPSS2O95340 614 aaPredicted RBP22.5■■□□□ 1.19
VSX1-206ENST00000444511 CKMP06732 381 aa22.5■■□□□ 1.19
VSX1-206ENST00000444511 PDGFRBP09619 1106 aa22.5■■□□□ 1.19
VSX1-206ENST00000444511 AFMP43652 599 aa22.5■■□□□ 1.19
VSX1-206ENST00000444511 CYP27A1Q02318 531 aa22.5■■□□□ 1.19
VSX1-206ENST00000444511 CYP24A1Q07973 514 aa22.5■■□□□ 1.19
VSX1-206ENST00000444511 RESP18Q5W5W9 173 aa22.5■■□□□ 1.19
VSX1-206ENST00000444511 VSTM1Q6UX27 236 aa22.5■■□□□ 1.19
VSX1-206ENST00000444511 CEP57L1Q8IYX8 460 aa22.5■■□□□ 1.19
VSX1-206ENST00000444511 FSIP1Q8NA03 581 aa22.5■■□□□ 1.19
VSX1-206ENST00000444511 TTC16Q8NEE8 873 aa22.5■■□□□ 1.19
VSX1-206ENST00000444511 SNX25Q9H3E2 840 aa22.5■■□□□ 1.19
VSX1-206ENST00000444511 SLC39A2Q9NP94 309 aa22.5■■□□□ 1.19
VSX1-206ENST00000444511 CRTAC1Q9NQ79 661 aa22.5■■□□□ 1.19
VSX1-206ENST00000444511 GPR179Q6PRD1 2367 aa22.5■■□□□ 1.19
VSX1-206ENST00000444511 WDR87Q6ZQQ6 2873 aa22.5■■□□□ 1.19
VSX1-206ENST00000444511 TRAV19A0A0A6YYK7 116 aa22.49■■□□□ 1.19
VSX1-206ENST00000444511 PVALEFA0A1B0GWK0 134 aa22.49■■□□□ 1.19
VSX1-206ENST00000444511 CHURC1-FNTBB4DL54 471 aa22.49■■□□□ 1.19
VSX1-206ENST00000444511 CST3P01034 146 aaPredicted RBP22.49■■□□□ 1.19
VSX1-206ENST00000444511 USP17L7P0C7H9 530 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms