RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 RIN2Q8WYP3 895 aaPredicted RBP22.35■■□□□ 1.17
VPS13B-204ENST00000441350 TMLHEQ9NVH6 421 aa22.35■■□□□ 1.17
VPS13B-204ENST00000441350 MTRRQ9UBK8 725 aa22.35■■□□□ 1.17
VPS13B-204ENST00000441350 BACE2Q9Y5Z0 518 aa22.35■■□□□ 1.17
VPS13B-204ENST00000441350 RANBP2P49792 3224 aaKnown RBP22.34■■□□□ 1.17
VPS13B-204ENST00000441350 PLXNA4Q9HCM2 1894 aa22.34■■□□□ 1.17
VPS13B-204ENST00000441350 C5orf67F2Z3F1 127 aa22.34■■□□□ 1.17
VPS13B-204ENST00000441350 M0QYV0 167 aa22.34■■□□□ 1.17
VPS13B-204ENST00000441350 FTLP02792 175 aaPredicted RBP22.34■■□□□ 1.17
VPS13B-204ENST00000441350 CTNNB1P35222 781 aa22.34■■□□□ 1.17
VPS13B-204ENST00000441350 GPD2P43304 727 aa22.34■■□□□ 1.17
VPS13B-204ENST00000441350 GLUD2P49448 558 aa22.34■■□□□ 1.17
VPS13B-204ENST00000441350 KIAA1841Q6NSI8 718 aa22.34■■□□□ 1.17
VPS13B-204ENST00000441350 RSPO2Q6UXX9 243 aaPredicted RBP22.34■■□□□ 1.17
VPS13B-204ENST00000441350 ZSCAN30Q86W11 494 aa22.34■■□□□ 1.17
VPS13B-204ENST00000441350 DNAAF5Q86Y56 855 aa22.34■■□□□ 1.17
VPS13B-204ENST00000441350 GPR65Q8IYL9 337 aa22.34■■□□□ 1.17
VPS13B-204ENST00000441350 VPS52Q8N1B4 723 aa22.34■■□□□ 1.17
VPS13B-204ENST00000441350 CPA5Q8WXQ8 436 aa22.34■■□□□ 1.17
VPS13B-204ENST00000441350 MYLPFQ96A32 169 aa22.34■■□□□ 1.17
VPS13B-204ENST00000441350 C17orf80Q9BSJ5 609 aa22.34■■□□□ 1.17
VPS13B-204ENST00000441350 YBX2Q9Y2T7 364 aaKnown RBP22.34■■□□□ 1.17
VPS13B-204ENST00000441350 CEP83Q9Y592 693 aa22.34■■□□□ 1.17
VPS13B-204ENST00000441350 ATP8B3O60423 1300 aa22.33■■□□□ 1.17
VPS13B-204ENST00000441350 PDE4DIPQ5VU43 2346 aa22.33■■□□□ 1.17
VPS13B-204ENST00000441350 ADORA2BP29275 332 aa22.33■■□□□ 1.17
VPS13B-204ENST00000441350 VAV2P52735 878 aa22.33■■□□□ 1.17
VPS13B-204ENST00000441350 PSMD5Q16401 504 aa22.33■■□□□ 1.17
VPS13B-204ENST00000441350 SPRED2Q7Z698 418 aa22.33■■□□□ 1.17
VPS13B-204ENST00000441350 DCP1BQ8IZD4 617 aaKnown RBP22.33■■□□□ 1.17
VPS13B-204ENST00000441350 CCAR2Q8N163 923 aaKnown RBP22.33■■□□□ 1.17
VPS13B-204ENST00000441350 C1orf131Q8NDD1 294 aaKnown RBP22.33■■□□□ 1.17
VPS13B-204ENST00000441350 UBA3Q8TBC4 463 aa22.33■■□□□ 1.17
VPS13B-204ENST00000441350 PACSIN1Q9BY11 444 aa22.33■■□□□ 1.17
VPS13B-204ENST00000441350 LUC7LQ9NQ29 371 aaKnown RBP22.33■■□□□ 1.17
VPS13B-204ENST00000441350 HESX1Q9UBX0 185 aa22.33■■□□□ 1.17
VPS13B-204ENST00000441350 INTUQ9ULD6 942 aa22.33■■□□□ 1.17
VPS13B-204ENST00000441350 LZTS1Q9Y250 596 aa22.33■■□□□ 1.17
VPS13B-204ENST00000441350 A0A0U1RQJ8 604 aa22.32■■□□□ 1.16
VPS13B-204ENST00000441350 RCCD1A6NED2 376 aa22.32■■□□□ 1.16
VPS13B-204ENST00000441350 CLDN5O00501 218 aa22.32■■□□□ 1.16
VPS13B-204ENST00000441350 OR4Q2P0C623 313 aa22.32■■□□□ 1.16
VPS13B-204ENST00000441350 PBX2P40425 430 aa22.32■■□□□ 1.16
VPS13B-204ENST00000441350 BCAT1P54687 386 aa22.32■■□□□ 1.16
VPS13B-204ENST00000441350 PPP1R2P3Q6NXS1 205 aa22.32■■□□□ 1.16
VPS13B-204ENST00000441350 PHF13Q86YI8 300 aaPredicted RBP22.32■■□□□ 1.16
VPS13B-204ENST00000441350 SLC35F5Q8WV83 523 aa22.32■■□□□ 1.16
VPS13B-204ENST00000441350 ATRIPQ8WXE1 791 aa22.32■■□□□ 1.16
VPS13B-204ENST00000441350 SECISBP2LQ93073 1101 aaKnown RBP22.32■■□□□ 1.16
VPS13B-204ENST00000441350 DUSP16Q9BY84 665 aa22.32■■□□□ 1.16
VPS13B-204ENST00000441350 PBX4Q9BYU1 374 aa22.32■■□□□ 1.16
VPS13B-204ENST00000441350 ZBP1Q9H171 429 aa22.32■■□□□ 1.16
VPS13B-204ENST00000441350 CYTH4Q9UIA0 394 aa22.32■■□□□ 1.16
VPS13B-204ENST00000441350 PTPRDP23468 1912 aa22.32■■□□□ 1.16
VPS13B-204ENST00000441350 ZSCAN12O43309 604 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 URODP06132 367 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 RB1P06400 928 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 H2AFZP0C0S5 128 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 SETSIPP0DME0 302 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 NSFP46459 744 aaKnown RBP22.31■■□□□ 1.16
VPS13B-204ENST00000441350 GALCP54803 685 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 TAP1Q03518 808 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 SLC39A12Q504Y0 691 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 SLC8B1Q6J4K2 584 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 ZNF662Q6ZS27 426 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 H2AFVQ71UI9 128 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 KIAA1328Q86T90 577 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 FAM35AQ86V20 835 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 REXO1L1PQ8IX06 675 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 TDHQ8IZJ6 230 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 FBXO22Q8NEZ5 403 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 SAMD11Q96NU1 681 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 MED10Q9BTT4 135 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 TFR2Q9UP52 801 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 CHD9Q3L8U1 2897 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 FAM170AA1A519 330 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 USP27XA6NNY8 438 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 PJA2O43164 708 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 LILRB3O75022 631 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 CTSAP10619 480 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 MMP8P22894 467 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 ERVK-21P61565 698 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 PDE4CQ08493 712 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 BST2Q10589 180 aaKnown RBP22.31■■□□□ 1.16
VPS13B-204ENST00000441350 PTP4A2Q12974 167 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 GPR17Q13304 367 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 NFE2Q16621 373 aaPredicted RBP22.31■■□□□ 1.16
VPS13B-204ENST00000441350 C4orf50Q6ZRC1 276 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 MON1BQ7L1V2 547 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 C17orf53Q8N3J3 647 aaPredicted RBP22.31■■□□□ 1.16
VPS13B-204ENST00000441350 TGS1Q96RS0 853 aaKnown RBP22.31■■□□□ 1.16
VPS13B-204ENST00000441350 LACRTQ9GZZ8 138 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 PRO3102Q9H379 93 aa22.31■■□□□ 1.16
VPS13B-204ENST00000441350 TRMT1Q9NXH9 659 aaKnown RBP22.31■■□□□ 1.16
VPS13B-204ENST00000441350 ANKRD62A6NC57 917 aa22.3■■□□□ 1.16
VPS13B-204ENST00000441350 C2CD2LO14523 706 aa22.3■■□□□ 1.16
VPS13B-204ENST00000441350 ADAM12O43184 909 aa22.3■■□□□ 1.16
VPS13B-204ENST00000441350 CAPN15O75808 1086 aa22.3■■□□□ 1.16
VPS13B-204ENST00000441350 ARHGAP25P42331 645 aa22.3■■□□□ 1.16
VPS13B-204ENST00000441350 CDR1P51861 262 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms