RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 MTMR12Q9C0I1 747 aa22.26■■□□□ 1.15
CPNE1-219ENST00000440240 KIAA1586Q9HCI6 787 aa22.26■■□□□ 1.15
CPNE1-219ENST00000440240 SIX4Q9UIU6 781 aa22.26■■□□□ 1.15
CPNE1-219ENST00000440240 CCL26Q9Y258 94 aa22.26■■□□□ 1.15
CPNE1-219ENST00000440240 NCOR2Q9Y618 2525 aa22.25■■□□□ 1.15
CPNE1-219ENST00000440240 HRO43593 1189 aa22.25■■□□□ 1.15
CPNE1-219ENST00000440240 LRP3O75074 770 aa22.25■■□□□ 1.15
CPNE1-219ENST00000440240 PPP6R2O75170 966 aa22.25■■□□□ 1.15
CPNE1-219ENST00000440240 NOL4O94818 638 aa22.25■■□□□ 1.15
CPNE1-219ENST00000440240 GRSF1Q12849 480 aaKnown RBP eCLIP22.25■■□□□ 1.153e-10■□□□□ 10.9
CPNE1-219ENST00000440240 ZNF268Q14587 947 aaPredicted RBP22.25■■□□□ 1.15
CPNE1-219ENST00000440240 LPAL2Q16609 132 aa22.25■■□□□ 1.15
CPNE1-219ENST00000440240 SOWAHAQ2M3V2 549 aa22.25■■□□□ 1.15
CPNE1-219ENST00000440240 KBTBD4Q9NVX7 518 aa22.25■■□□□ 1.15
CPNE1-219ENST00000440240 MED19A0JLT2 244 aaPredicted RBP22.24■■□□□ 1.15
CPNE1-219ENST00000440240 K7ELQ4 463 aaPredicted RBP22.24■■□□□ 1.15
CPNE1-219ENST00000440240 SPTLC2O15270 562 aa22.24■■□□□ 1.15
CPNE1-219ENST00000440240 ATG13O75143 517 aa22.24■■□□□ 1.15
CPNE1-219ENST00000440240 TNNC2P02585 160 aa22.24■■□□□ 1.15
CPNE1-219ENST00000440240 DMWDQ09019 674 aa22.24■■□□□ 1.15
CPNE1-219ENST00000440240 PDGFRLQ15198 375 aa22.24■■□□□ 1.15
CPNE1-219ENST00000440240 SDHAF4Q5VUM1 108 aa22.24■■□□□ 1.15
CPNE1-219ENST00000440240 SCARA3Q6AZY7 606 aa22.24■■□□□ 1.15
CPNE1-219ENST00000440240 FAM171BQ6P995 826 aa22.24■■□□□ 1.15
CPNE1-219ENST00000440240 C4orf50Q6ZRC1 276 aa22.24■■□□□ 1.15
CPNE1-219ENST00000440240 EXOC4Q96A65 974 aa22.24■■□□□ 1.15
CPNE1-219ENST00000440240 HPDLQ96IR7 371 aa22.24■■□□□ 1.15
CPNE1-219ENST00000440240 ZNF396Q96N95 335 aaPredicted RBP22.24■■□□□ 1.15
CPNE1-219ENST00000440240 EBF3Q9H4W6 596 aa22.24■■□□□ 1.15
CPNE1-219ENST00000440240 FOXD4L1Q9NU39 408 aa22.24■■□□□ 1.15
CPNE1-219ENST00000440240 CDV3Q9UKY7 258 aaKnown RBP22.24■■□□□ 1.15
CPNE1-219ENST00000440240 TRDMT1O14717 391 aaKnown RBP22.23■■□□□ 1.15
CPNE1-219ENST00000440240 MAGEA11P43364 429 aa22.23■■□□□ 1.15
CPNE1-219ENST00000440240 ATXN1P54253 815 aaKnown RBP22.23■■□□□ 1.15
CPNE1-219ENST00000440240 SPEM2Q0P670 501 aa22.23■■□□□ 1.15
CPNE1-219ENST00000440240 MAPRE1Q15691 268 aaKnown RBP22.23■■□□□ 1.15
CPNE1-219ENST00000440240 TMEM196Q5HYL7 178 aa22.23■■□□□ 1.15
CPNE1-219ENST00000440240 HEATR6Q6AI08 1181 aaKnown RBP22.23■■□□□ 1.15
CPNE1-219ENST00000440240 OSTM1Q86WC4 334 aa22.23■■□□□ 1.15
CPNE1-219ENST00000440240 FSIP1Q8NA03 581 aa22.23■■□□□ 1.15
CPNE1-219ENST00000440240 IQUBQ8NA54 791 aa22.23■■□□□ 1.15
CPNE1-219ENST00000440240 FAM84AQ96KN4 292 aa22.23■■□□□ 1.15
CPNE1-219ENST00000440240 TRIM9Q9C026 710 aa22.23■■□□□ 1.15
CPNE1-219ENST00000440240 PARD6AQ9NPB6 346 aa22.23■■□□□ 1.15
CPNE1-219ENST00000440240 HPS4Q9NQG7 708 aa22.23■■□□□ 1.15
CPNE1-219ENST00000440240 HSPBP1Q9NZL4 362 aa22.23■■□□□ 1.15
CPNE1-219ENST00000440240 EIF3DO15371 548 aaKnown RBP eCLIP22.22■■□□□ 1.15
CPNE1-219ENST00000440240 USP17L7P0C7H9 530 aa22.22■■□□□ 1.15
CPNE1-219ENST00000440240 FAM160A1Q05DH4 1040 aa22.22■■□□□ 1.15
CPNE1-219ENST00000440240 E2F4Q16254 413 aa22.22■■□□□ 1.15
CPNE1-219ENST00000440240 LMBRD2Q68DH5 695 aaPredicted RBP22.22■■□□□ 1.15
CPNE1-219ENST00000440240 TRIM68Q6AZZ1 485 aa22.22■■□□□ 1.15
CPNE1-219ENST00000440240 LIMS2Q7Z4I7 341 aa22.22■■□□□ 1.15
CPNE1-219ENST00000440240 WDR5BQ86VZ2 330 aa22.22■■□□□ 1.15
CPNE1-219ENST00000440240 CBWD2Q8IUF1 395 aa22.22■■□□□ 1.15
CPNE1-219ENST00000440240 WDR49Q8IV35 697 aa22.22■■□□□ 1.15
CPNE1-219ENST00000440240 SCN4BQ8IWT1 228 aa22.22■■□□□ 1.15
CPNE1-219ENST00000440240 STKLD1Q8NE28 680 aa22.22■■□□□ 1.15
CPNE1-219ENST00000440240 OR5B17Q8NGF7 314 aa22.22■■□□□ 1.15
CPNE1-219ENST00000440240 ZNF507Q8TCN5 953 aa22.22■■□□□ 1.15
CPNE1-219ENST00000440240 CEP295NLQ96MC4 621 aa22.22■■□□□ 1.15
CPNE1-219ENST00000440240 RTKNQ9BST9 563 aa22.22■■□□□ 1.15
CPNE1-219ENST00000440240 TFIP11Q9UBB9 837 aaKnown RBP22.22■■□□□ 1.15
CPNE1-219ENST00000440240 MAGEC2Q9UBF1 373 aaPredicted RBP22.22■■□□□ 1.15
CPNE1-219ENST00000440240 CDH9Q9ULB4 789 aa22.22■■□□□ 1.15
CPNE1-219ENST00000440240 TRAV19A0A0A6YYK7 116 aa22.21■■□□□ 1.15
CPNE1-219ENST00000440240 OTOL1A6NHN0 477 aaPredicted RBP22.21■■□□□ 1.15
CPNE1-219ENST00000440240 FOXD2O60548 495 aaPredicted RBP22.21■■□□□ 1.15
CPNE1-219ENST00000440240 CNNM4Q6P4Q7 775 aa22.21■■□□□ 1.15
CPNE1-219ENST00000440240 VSTM1Q6UX27 236 aa22.21■■□□□ 1.15
CPNE1-219ENST00000440240 CEP68Q76N32 757 aa22.21■■□□□ 1.15
CPNE1-219ENST00000440240 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.21■■□□□ 1.15
CPNE1-219ENST00000440240 GLIS3Q8NEA6 775 aa22.21■■□□□ 1.15
CPNE1-219ENST00000440240 HPS3Q969F9 1004 aa22.21■■□□□ 1.15
CPNE1-219ENST00000440240 TRPC7Q9HCX4 862 aa22.21■■□□□ 1.15
CPNE1-219ENST00000440240 C2orf42Q9NWW7 574 aa22.21■■□□□ 1.15
CPNE1-219ENST00000440240 SPTBN2O15020 2390 aa22.21■■□□□ 1.15
CPNE1-219ENST00000440240 CCDC163A0A0D9SF12 145 aa22.2■■□□□ 1.14
CPNE1-219ENST00000440240 CUTAO60888 179 aa22.2■■□□□ 1.14
CPNE1-219ENST00000440240 YEATS4O95619 227 aa22.2■■□□□ 1.14
CPNE1-219ENST00000440240 CKMP06732 381 aa22.2■■□□□ 1.14
CPNE1-219ENST00000440240 PDIA4P13667 645 aaKnown RBP22.2■■□□□ 1.14
CPNE1-219ENST00000440240 DRD1P21728 446 aa22.2■■□□□ 1.14
CPNE1-219ENST00000440240 HOXD13P35453 343 aa22.2■■□□□ 1.14
CPNE1-219ENST00000440240 SNRPFP62306 86 aaKnown RBP22.2■■□□□ 1.14
CPNE1-219ENST00000440240 ASIC1P78348 528 aa22.2■■□□□ 1.14
CPNE1-219ENST00000440240 SRSF5Q13243 272 aaKnown RBP22.2■■□□□ 1.14
CPNE1-219ENST00000440240 MTF1Q14872 753 aa22.2■■□□□ 1.14
CPNE1-219ENST00000440240 FSTL4Q6MZW2 842 aa22.2■■□□□ 1.14
CPNE1-219ENST00000440240 EPM2AIP1Q7L775 607 aaPredicted RBP22.2■■□□□ 1.14
CPNE1-219ENST00000440240 CPA6Q8N4T0 437 aa22.2■■□□□ 1.14
CPNE1-219ENST00000440240 DHX58Q96C10 678 aa22.2■■□□□ 1.14
CPNE1-219ENST00000440240 SPATA17Q96L03 361 aa22.2■■□□□ 1.14
CPNE1-219ENST00000440240 CYP2S1Q96SQ9 504 aa22.2■■□□□ 1.14
CPNE1-219ENST00000440240 MMS19Q96T76 1030 aa22.2■■□□□ 1.14
CPNE1-219ENST00000440240 SYT15Q9BQS2 421 aa22.2■■□□□ 1.14
CPNE1-219ENST00000440240 BACH2Q9BYV9 841 aa22.2■■□□□ 1.14
CPNE1-219ENST00000440240 SLC8A2Q9UPR5 921 aa22.2■■□□□ 1.14
CPNE1-219ENST00000440240 PTPRJQ12913 1337 aa22.2■■□□□ 1.14
CPNE1-219ENST00000440240 HCRTO43612 131 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms