RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 NT5DC1Q5TFE4 455 aa9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 C1orf228Q6PIY5 440 aa9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 SYT13Q7L8C5 426 aa9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 LYSMD3Q7Z3D4 306 aa9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 DNAJB7Q7Z6W7 309 aaPredicted RBP9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 TPH2Q8IWU9 490 aa9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 ATAD1Q8NBU5 361 aa9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 PIP4K2CQ8TBX8 421 aa9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 RUFY2Q8WXA3 655 aa9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 ADAMTS14Q8WXS8 1223 aa9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 E2F7Q96AV8 911 aa9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 KIFC3Q9BVG8 833 aa9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 KCNMB3Q9NPA1 279 aa9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 DDX25Q9UHL0 483 aaKnown RBP9.47□□□□□ -0.89
NIF3L1-206ENST00000416651 GOLGA4Q13439 2230 aaKnown RBP9.46□□□□□ -0.89
NIF3L1-206ENST00000416651 FAM149AA5PLN7 773 aa9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 USO1O60763 962 aaKnown RBP9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 CFIP05156 583 aa9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 CPB1P15086 417 aa9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 GNA11P29992 359 aa9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 NMT1P30419 496 aaKnown RBP9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 MCM2P49736 904 aa9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 KARSQ15046 597 aaKnown RBP9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 PCBP1Q15365 356 aaKnown RBP eCLIP9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 TRIP6Q15654 476 aaKnown RBP9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 C2orf27AQ580R0 203 aa9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 TPGS2Q68CL5 300 aa9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 ZNF605Q86T29 641 aa9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 RASSF3Q86WH2 238 aa9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 MINDY1Q8N5J2 469 aa9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 BEST2Q8NFU1 509 aa9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 TSTD1Q8NFU3 115 aa9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 OLIG1Q8TAK6 271 aa9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 USP13Q92995 863 aaPredicted RBP9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 P2RY13Q9BPV8 354 aa9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 SLC26A6Q9BXS9 759 aa9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 NCOA5Q9HCD5 579 aaKnown RBP9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 TBX20Q9UMR3 447 aa9.46□□□□□ -0.9
NIF3L1-206ENST00000416651 UPK3BL1B0FP48 263 aa9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 UPK3BL2E5RIL1 263 aa9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 H0Y626 953 aa9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 TRIM16O95361 564 aa9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 NLRP5P59047 1200 aa9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 LMAN2Q12907 356 aa9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 ZNF423Q2M1K9 1284 aa9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 USP39Q53GS9 565 aaKnown RBP9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 EARS2Q5JPH6 523 aaKnown RBP9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 EMC10Q5UCC4 262 aa9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 CDCA2Q69YH5 1023 aaPredicted RBP9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 SLC23A3Q6PIS1 610 aa9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 ALKAL1Q6UXT8 129 aa9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 HAUS6Q7Z4H7 955 aa9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 TMEM150AQ86TG1 271 aa9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 ERLEC1Q96DZ1 483 aa9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 TBC1D32Q96NH3 1257 aa9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 NUSAP1Q9BXS6 441 aaKnown RBP9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 NFKBIZQ9BYH8 718 aa9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 GPR88Q9GZN0 384 aa9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 CCDC113Q9H0I3 377 aa9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 GJB4Q9NTQ9 266 aa9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 PILRBQ9UKJ0 227 aa9.45□□□□□ -0.9
NIF3L1-206ENST00000416651 CEP192Q8TEP8 1941 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 MTMR11A4FU01 709 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 TRABD2BA6NFA1 517 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 K7EQS6 105 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 SYN3O14994 580 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 N4BP3O15049 544 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 ATXN7O15265 892 aaPredicted RBP9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 TRAPPC3O43617 180 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 GJB3O75712 270 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 P2RY2P41231 377 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 RARRES1P49788 294 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 GUCY2FP51841 1108 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 CLDN6P56747 220 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 SPAG1Q07617 926 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 PLD1Q13393 1074 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 PRPF4BQ13523 1007 aaKnown RBP9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 FAM187BQ17R55 369 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 TMEM132AQ24JP5 1023 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 MAP7D1Q3KQU3 841 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 SEZ6Q53EL9 994 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 CENPPQ6IPU0 288 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 OTUD6AQ7L8S5 288 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 SYT12Q8IV01 421 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 MAB21L3Q8N8X9 362 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 LEMD2Q8NC56 503 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 TTC16Q8NEE8 873 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 USP33Q8TEY7 942 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 GIPC2Q8TF65 315 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 ZNF837Q96EG3 531 aaPredicted RBP9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 SUSD3Q96L08 255 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 UBL7Q96S82 380 aaPredicted RBP9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 EIF2AK1Q9BQI3 630 aaKnown RBP9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 LINC00597Q9H2U6 94 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 TASP1Q9H6P5 420 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 ZSWIM4Q9H7M6 989 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 CAPN10Q9HC96 672 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 PRMT7Q9NVM4 692 aaPredicted RBP9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 OBP2AQ9NY56 170 aa9.44□□□□□ -0.9
NIF3L1-206ENST00000416651 TUBGCP4Q9UGJ1 667 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms