RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 NEU2Q9Y3R4 380 aa19.28■□□□□ 0.68
PDLIM7-203ENST00000359895 hCG_1818297A0A087WSY0 165 aa19.27■□□□□ 0.68
PDLIM7-203ENST00000359895 PI4K2BG5E9Z4 385 aa19.27■□□□□ 0.68
PDLIM7-203ENST00000359895 EIF3HO15372 352 aaKnown RBP eCLIP19.27■□□□□ 0.68
PDLIM7-203ENST00000359895 XPOTO43592 962 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-203ENST00000359895 MYL3P08590 195 aa19.27■□□□□ 0.68
PDLIM7-203ENST00000359895 GNAT1P11488 350 aa19.27■□□□□ 0.68
PDLIM7-203ENST00000359895 TCF4P15884 667 aa19.27■□□□□ 0.68
PDLIM7-203ENST00000359895 IVDP26440 423 aa19.27■□□□□ 0.68
PDLIM7-203ENST00000359895 ADCY8P40145 1251 aa19.27■□□□□ 0.68
PDLIM7-203ENST00000359895 HNRNPH2P55795 449 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-203ENST00000359895 INHBEP58166 350 aa19.27■□□□□ 0.68
PDLIM7-203ENST00000359895 ATP13A4Q4VNC1 1196 aa19.27■□□□□ 0.68
PDLIM7-203ENST00000359895 TMEM130Q8N3G9 435 aa19.27■□□□□ 0.68
PDLIM7-203ENST00000359895 NME8Q8N427 588 aa19.27■□□□□ 0.68
PDLIM7-203ENST00000359895 JOSD2Q8TAC2 188 aa19.27■□□□□ 0.68
PDLIM7-203ENST00000359895 FRMD8P1Q9BZ68 369 aaPredicted RBP19.27■□□□□ 0.68
PDLIM7-203ENST00000359895 FOXP3Q9BZS1 431 aa19.27■□□□□ 0.68
PDLIM7-203ENST00000359895 CDHR5Q9HBB8 845 aa19.27■□□□□ 0.68
PDLIM7-203ENST00000359895 METTL5Q9NRN9 209 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-203ENST00000359895 LRRD1A4D1F6 860 aa19.27■□□□□ 0.67
PDLIM7-203ENST00000359895 NDC80O14777 642 aa19.27■□□□□ 0.67
PDLIM7-203ENST00000359895 LIASO43766 372 aa19.27■□□□□ 0.67
PDLIM7-203ENST00000359895 SETSIPP0DME0 302 aa19.27■□□□□ 0.67
PDLIM7-203ENST00000359895 CDKN2BP42772 138 aa19.27■□□□□ 0.67
PDLIM7-203ENST00000359895 SNX16P57768 344 aa19.27■□□□□ 0.67
PDLIM7-203ENST00000359895 HTRA3P83110 453 aa19.27■□□□□ 0.67
PDLIM7-203ENST00000359895 ADCY2Q08462 1091 aa19.27■□□□□ 0.67
PDLIM7-203ENST00000359895 ALKAL1Q6UXT8 129 aa19.27■□□□□ 0.67
PDLIM7-203ENST00000359895 DNAJB3Q8WWF6 145 aa19.27■□□□□ 0.67
PDLIM7-203ENST00000359895 EIF2AQ9BY44 585 aaKnown RBP19.27■□□□□ 0.67
PDLIM7-203ENST00000359895 DNAI2Q9GZS0 605 aa19.27■□□□□ 0.67
PDLIM7-203ENST00000359895 KLHL11Q9NVR0 708 aa19.27■□□□□ 0.67
PDLIM7-203ENST00000359895 ASNSD1Q9NWL6 643 aa19.27■□□□□ 0.67
PDLIM7-203ENST00000359895 ANAPC5Q9UJX4 755 aa19.27■□□□□ 0.67
PDLIM7-203ENST00000359895 UBQLN1Q9UMX0 589 aaKnown RBP19.27■□□□□ 0.67
PDLIM7-203ENST00000359895 SRRM3A6NNA2 597 aaPredicted RBP19.26■□□□□ 0.67
PDLIM7-203ENST00000359895 RIPK2O43353 540 aa19.26■□□□□ 0.67
PDLIM7-203ENST00000359895 RNF8O76064 485 aa19.26■□□□□ 0.67
PDLIM7-203ENST00000359895 CD4P01730 458 aa19.26■□□□□ 0.67
PDLIM7-203ENST00000359895 ATP1A2P50993 1020 aa19.26■□□□□ 0.67
PDLIM7-203ENST00000359895 CDR1P51861 262 aa19.26■□□□□ 0.67
PDLIM7-203ENST00000359895 ITGA8P53708 1063 aa19.26■□□□□ 0.67
PDLIM7-203ENST00000359895 SLC25A11Q02978 314 aaKnown RBP19.26■□□□□ 0.67
PDLIM7-203ENST00000359895 BYSLQ13895 437 aaKnown RBP19.26■□□□□ 0.67
PDLIM7-203ENST00000359895 SLC29A2Q14542 456 aa19.26■□□□□ 0.67
PDLIM7-203ENST00000359895 SNX17Q15036 470 aa19.26■□□□□ 0.67
PDLIM7-203ENST00000359895 KAZNQ674X7 775 aa19.26■□□□□ 0.67
PDLIM7-203ENST00000359895 GSTA5Q7RTV2 222 aa19.26■□□□□ 0.67
PDLIM7-203ENST00000359895 ANKS1BQ7Z6G8 1248 aa19.26■□□□□ 0.67
PDLIM7-203ENST00000359895 UNC93AQ86WB7 457 aa19.26■□□□□ 0.67
PDLIM7-203ENST00000359895 PGM2Q96G03 612 aa19.26■□□□□ 0.67
PDLIM7-203ENST00000359895 SEMA4AQ9H3S1 761 aa19.26■□□□□ 0.67
PDLIM7-203ENST00000359895 BCCIPQ9P287 314 aaKnown RBP eCLIP19.26■□□□□ 0.67
PDLIM7-203ENST00000359895 TJP2Q9UDY2 1190 aa19.26■□□□□ 0.67
PDLIM7-203ENST00000359895 C17orf102A2RUQ5 167 aa19.25■□□□□ 0.67
PDLIM7-203ENST00000359895 KPNA6O60684 536 aa19.25■□□□□ 0.67
PDLIM7-203ENST00000359895 LRCH4O75427 683 aa19.25■□□□□ 0.67
PDLIM7-203ENST00000359895 KRT10P13645 584 aa19.25■□□□□ 0.67
PDLIM7-203ENST00000359895 CYP2B6P20813 491 aa19.25■□□□□ 0.67
PDLIM7-203ENST00000359895 MDH1P40925 334 aaKnown RBP19.25■□□□□ 0.67
PDLIM7-203ENST00000359895 CCL14Q16627 93 aa19.25■□□□□ 0.67
PDLIM7-203ENST00000359895 C6orf118Q5T5N4 469 aa19.25■□□□□ 0.67
PDLIM7-203ENST00000359895 IFNL1Q8IU54 200 aa19.25■□□□□ 0.67
PDLIM7-203ENST00000359895 TTC13Q8NBP0 860 aa19.25■□□□□ 0.67
PDLIM7-203ENST00000359895 RAPGEF5Q92565 580 aa19.25■□□□□ 0.67
PDLIM7-203ENST00000359895 ZMAT2Q96NC0 199 aaKnown RBP19.25■□□□□ 0.67
PDLIM7-203ENST00000359895 ZFYVE28Q9HCC9 887 aa19.25■□□□□ 0.67
PDLIM7-203ENST00000359895 TSPAN16Q9UKR8 245 aa19.25■□□□□ 0.67
PDLIM7-203ENST00000359895 NOVA2Q9UNW9 492 aaKnown RBP19.25■□□□□ 0.67
PDLIM7-203ENST00000359895 SNX9Q9Y5X1 595 aa19.25■□□□□ 0.67
PDLIM7-203ENST00000359895 GRIN2DO15399 1336 aa19.25■□□□□ 0.67
PDLIM7-203ENST00000359895 TMEM88BA6NKF7 163 aa19.24■□□□□ 0.67
PDLIM7-203ENST00000359895 RECQL4O94761 1208 aa19.24■□□□□ 0.67
PDLIM7-203ENST00000359895 KLRC2P26717 231 aa19.24■□□□□ 0.67
PDLIM7-203ENST00000359895 CRYBB1P53674 252 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-203ENST00000359895 PPP2R2AP63151 447 aa19.24■□□□□ 0.67
PDLIM7-203ENST00000359895 FAM102AQ5T9C2 384 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-203ENST00000359895 C9orf57Q5W0N0 161 aa19.24■□□□□ 0.67
PDLIM7-203ENST00000359895 RGMBQ6NW40 437 aa19.24■□□□□ 0.67
PDLIM7-203ENST00000359895 CCDC25Q86WR0 208 aa19.24■□□□□ 0.67
PDLIM7-203ENST00000359895 UBA3Q8TBC4 463 aa19.24■□□□□ 0.67
PDLIM7-203ENST00000359895 TLCD1Q96CP7 247 aa19.24■□□□□ 0.67
PDLIM7-203ENST00000359895 ZNF560Q96MR9 790 aa19.24■□□□□ 0.67
PDLIM7-203ENST00000359895 ROPN1BQ9BZX4 212 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-203ENST00000359895 STMN4Q9H169 189 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-203ENST00000359895 ROPN1Q9HAT0 212 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-203ENST00000359895 GJD2Q9UKL4 321 aa19.24■□□□□ 0.67
PDLIM7-203ENST00000359895 PIN4Q9Y237 131 aaKnown RBP19.24■□□□□ 0.67
PDLIM7-203ENST00000359895 C3orf70A6NLC5 250 aaPredicted RBP19.23■□□□□ 0.67
PDLIM7-203ENST00000359895 TP73O15350 636 aa19.23■□□□□ 0.67
PDLIM7-203ENST00000359895 TREHO43280 583 aa19.23■□□□□ 0.67
PDLIM7-203ENST00000359895 IGHA2P01877 340 aa19.23■□□□□ 0.67
PDLIM7-203ENST00000359895 HPDP32754 393 aaPredicted RBP19.23■□□□□ 0.67
PDLIM7-203ENST00000359895 PCK1P35558 622 aa19.23■□□□□ 0.67
PDLIM7-203ENST00000359895 PNPLA4P41247 253 aa19.23■□□□□ 0.67
PDLIM7-203ENST00000359895 VCPP55072 806 aaKnown RBP19.23■□□□□ 0.67
PDLIM7-203ENST00000359895 HIC1Q14526 733 aa19.23■□□□□ 0.67
PDLIM7-203ENST00000359895 TRIP13Q15645 432 aaPredicted RBP19.23■□□□□ 0.67
PDLIM7-203ENST00000359895 TAZQ16635 292 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms