RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 ACAT1P24752 427 aaKnown RBP15.57■□□□□ 0.08
CXCL12-201ENST00000343575 OR1G1P47890 313 aa15.57■□□□□ 0.08
CXCL12-201ENST00000343575 SLC11A1P49279 550 aa15.57■□□□□ 0.08
CXCL12-201ENST00000343575 MAP9Q49MG5 647 aa15.57■□□□□ 0.08
CXCL12-201ENST00000343575 SGO2Q562F6 1265 aa15.57■□□□□ 0.08
CXCL12-201ENST00000343575 LLGL2Q6P1M3 1020 aa15.57■□□□□ 0.08
CXCL12-201ENST00000343575 LCLAT1Q6UWP7 414 aa15.57■□□□□ 0.08
CXCL12-201ENST00000343575 TRIM72Q6ZMU5 477 aa15.57■□□□□ 0.08
CXCL12-201ENST00000343575 OTOP2Q7RTS6 562 aa15.57■□□□□ 0.08
CXCL12-201ENST00000343575 TMEM173Q86WV6 379 aaPredicted RBP15.57■□□□□ 0.08
CXCL12-201ENST00000343575 MCOLN2Q8IZK6 566 aa15.57■□□□□ 0.08
CXCL12-201ENST00000343575 C1orf131Q8NDD1 294 aaKnown RBP15.57■□□□□ 0.08
CXCL12-201ENST00000343575 EPC1Q9H2F5 836 aa15.57■□□□□ 0.08
CXCL12-201ENST00000343575 OSGEPQ9NPF4 335 aa15.57■□□□□ 0.08
CXCL12-201ENST00000343575 LUC7LQ9NQ29 371 aaKnown RBP15.57■□□□□ 0.08
CXCL12-201ENST00000343575 COG5Q9UP83 839 aa15.57■□□□□ 0.08
CXCL12-201ENST00000343575 PRG3Q9Y2Y8 225 aaPredicted RBP15.57■□□□□ 0.08
CXCL12-201ENST00000343575 NCANO14594 1321 aa15.56■□□□□ 0.08
CXCL12-201ENST00000343575 ATMINO43313 823 aaPredicted RBP15.56■□□□□ 0.08
CXCL12-201ENST00000343575 MICAL2O94851 1124 aa15.56■□□□□ 0.08
CXCL12-201ENST00000343575 PBX3P40426 434 aa15.56■□□□□ 0.08
CXCL12-201ENST00000343575 GPD2P43304 727 aa15.56■□□□□ 0.08
CXCL12-201ENST00000343575 ZNF569Q5MCW4 686 aa15.56■□□□□ 0.08
CXCL12-201ENST00000343575 TTC30AQ86WT1 665 aa15.56■□□□□ 0.08
CXCL12-201ENST00000343575 PHF13Q86YI8 300 aaPredicted RBP15.56■□□□□ 0.08
CXCL12-201ENST00000343575 C7orf61Q8IZ16 206 aa15.56■□□□□ 0.08
CXCL12-201ENST00000343575 TMEM86AQ8N2M4 240 aa15.56■□□□□ 0.08
CXCL12-201ENST00000343575 SLC35F6Q8N357 371 aa15.56■□□□□ 0.08
CXCL12-201ENST00000343575 SNX25Q9H3E2 840 aa15.56■□□□□ 0.08
CXCL12-201ENST00000343575 CWH43Q9H720 699 aa15.56■□□□□ 0.08
CXCL12-201ENST00000343575 FAM49BQ9NUQ9 324 aa15.56■□□□□ 0.08
CXCL12-201ENST00000343575 KIAA1257Q9ULG3 409 aa15.56■□□□□ 0.08
CXCL12-201ENST00000343575 A0A0A6YYK5 440 aaPredicted RBP15.55■□□□□ 0.08
CXCL12-201ENST00000343575 LSM8O95777 96 aaKnown RBP15.55■□□□□ 0.08
CXCL12-201ENST00000343575 GALTP07902 379 aa15.55■□□□□ 0.08
CXCL12-201ENST00000343575 MMP8P22894 467 aa15.55■□□□□ 0.08
CXCL12-201ENST00000343575 PSMC1P62191 440 aaKnown RBP15.55■□□□□ 0.08
CXCL12-201ENST00000343575 ARHGAP17Q68EM7 881 aa15.55■□□□□ 0.08
CXCL12-201ENST00000343575 ZNF365Q70YC5 407 aa15.55■□□□□ 0.08
CXCL12-201ENST00000343575 C10orf67Q8IYJ2 551 aa15.55■□□□□ 0.08
CXCL12-201ENST00000343575 RNF10Q8N5U6 811 aaKnown RBP15.55■□□□□ 0.08
CXCL12-201ENST00000343575 SLC35G2Q8TBE7 412 aa15.55■□□□□ 0.08
CXCL12-201ENST00000343575 BCL7CQ8WUZ0 217 aaPredicted RBP15.55■□□□□ 0.08
CXCL12-201ENST00000343575 PPM1EQ8WY54 764 aa15.55■□□□□ 0.08
CXCL12-201ENST00000343575 SECISBP2LQ93073 1101 aaKnown RBP15.55■□□□□ 0.08
CXCL12-201ENST00000343575 RPGRIP1Q96KN7 1286 aa15.55■□□□□ 0.08
CXCL12-201ENST00000343575 FAM193BQ96PV7 902 aaPredicted RBP15.55■□□□□ 0.08
CXCL12-201ENST00000343575 CRTAC1Q9NQ79 661 aa15.55■□□□□ 0.08
CXCL12-201ENST00000343575 DDX43Q9NXZ2 648 aaKnown RBP15.55■□□□□ 0.08
CXCL12-201ENST00000343575 TJP2Q9UDY2 1190 aa15.55■□□□□ 0.08
CXCL12-201ENST00000343575 TSPAN16Q9UKR8 245 aa15.55■□□□□ 0.08
CXCL12-201ENST00000343575 VWA8A3KMH1 1905 aa15.55■□□□□ 0.08
CXCL12-201ENST00000343575 NT5C1B-RDH14C9J2C7 533 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 MED7O43513 233 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 CYP1A2P05177 515 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 CCDC130P13994 396 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 SYN1P17600 705 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 PAX3P23760 479 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 TKTP29401 623 aaKnown RBP15.54■□□□□ 0.08
CXCL12-201ENST00000343575 LHX1P48742 406 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 TCEAL1Q15170 157 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 COL13A1Q5TAT6 717 aaPredicted RBP15.54■□□□□ 0.08
CXCL12-201ENST00000343575 FAM117BQ6P1L5 589 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 PAQR9Q6ZVX9 377 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 B3GALNT2Q8NCR0 500 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 UBA3Q8TBC4 463 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 RFFLQ8WZ73 363 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 MRPL9Q9BYD2 267 aaKnown RBP15.54■□□□□ 0.08
CXCL12-201ENST00000343575 GPR62Q9BZJ7 368 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 BAIAP3O94812 1187 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 EFEMP2O95967 443 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 AMHP03971 560 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 ALDH2P05091 517 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 ODC1P11926 461 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 PTPN1P18031 435 aaKnown RBP15.54■□□□□ 0.08
CXCL12-201ENST00000343575 NOP2P46087 812 aaKnown RBP15.54■□□□□ 0.08
CXCL12-201ENST00000343575 NSFP46459 744 aaKnown RBP15.54■□□□□ 0.08
CXCL12-201ENST00000343575 CDR1P51861 262 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 GPC5P78333 572 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 FPGSQ05932 587 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 CASP8Q14790 479 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 PTPN20Q4JDL3 420 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 TMEM240Q5SV17 173 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 MMS22LQ6ZRQ5 1243 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 FUKQ8N0W3 1084 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 LRRC43Q8N309 656 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 TMEM35BQ8NCS4 154 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 CTNNBL1Q8WYA6 563 aaPredicted RBP15.54■□□□□ 0.08
CXCL12-201ENST00000343575 PKMYT1Q99640 499 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 C11orf70Q9BRQ4 267 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 ZNF518BQ9C0D4 1074 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 ABCB6Q9NP58 842 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 CXXC1Q9P0U4 656 aaPredicted RBP15.54■□□□□ 0.08
CXCL12-201ENST00000343575 GTF3C4Q9UKN8 822 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 ADAM28Q9UKQ2 775 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 PCDHGC5Q9Y5F6 944 aa15.54■□□□□ 0.08
CXCL12-201ENST00000343575 LAMA2P24043 3122 aaKnown RBP15.53■□□□□ 0.08
CXCL12-201ENST00000343575 TCRBV5S1A1TA0A578 114 aa15.53■□□□□ 0.08
CXCL12-201ENST00000343575 MYBPHLA2RUH7 354 aa15.53■□□□□ 0.08
CXCL12-201ENST00000343575 GRID2IPA4D2P6 1211 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms