RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 SATL1Q86VE3 508 aa16.76■□□□□ 0.27
NPHP3-201ENST00000337331 WWP1Q9H0M0 922 aa16.76■□□□□ 0.27
NPHP3-201ENST00000337331 WDR37Q9Y2I8 494 aa16.76■□□□□ 0.27
NPHP3-201ENST00000337331 GNGT2O14610 69 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 NFKBIAP25963 317 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 TRMT5Q32P41 509 aaKnown RBP16.75■□□□□ 0.27
NPHP3-201ENST00000337331 XKR3Q5GH77 459 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 RBM46Q8TBY0 533 aaKnown RBP16.75■□□□□ 0.27
NPHP3-201ENST00000337331 UPF3AQ9H1J1 476 aaKnown RBP16.75■□□□□ 0.27
NPHP3-201ENST00000337331 USP32Q8NFA0 1604 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 KIAA1210Q9ULL0 1709 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 ADCY6O43306 1168 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 TYK2P29597 1187 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 MAGEA10P43363 369 aaPredicted RBP16.75■□□□□ 0.27
NPHP3-201ENST00000337331 STAT5BP51692 787 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 CASP7P55210 303 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 RASA2Q15283 850 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 ADGRA1Q86SQ6 560 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 TXNRD3Q86VQ6 643 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 GDPD5Q8WTR4 605 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 TIPINQ9BVW5 301 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 NR3C2P08235 984 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 ANPEPP15144 967 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 MAGEA4P43358 317 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 TMTC4Q5T4D3 741 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 RSBN1LQ6PCB5 846 aaPredicted RBP16.75■□□□□ 0.27
NPHP3-201ENST00000337331 ARID3BQ8IVW6 561 aaPredicted RBP16.75■□□□□ 0.27
NPHP3-201ENST00000337331 MTFR1LQ9H019 292 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 KCND2Q9NZV8 630 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 WARS2Q9UGM6 360 aaKnown RBP16.75■□□□□ 0.27
NPHP3-201ENST00000337331 PCDHB2Q9Y5E7 798 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 WASF2Q9Y6W5 498 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 RPL5P46777 297 aaKnown RBP16.75■□□□□ 0.27
NPHP3-201ENST00000337331 NCOA4Q13772 614 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 TWF2Q6IBS0 349 aaKnown RBP16.75■□□□□ 0.27
NPHP3-201ENST00000337331 ZBTB46Q86UZ6 589 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 SLC10A4Q96EP9 437 aa16.75■□□□□ 0.27
NPHP3-201ENST00000337331 ZNF200P98182 395 aaPredicted RBP16.74■□□□□ 0.27
NPHP3-201ENST00000337331 OCA2Q04671 838 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 FSCBQ5H9T9 825 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 DDI1Q8WTU0 396 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 PI4K2AQ9BTU6 479 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 TRPV6Q9H1D0 765 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 STAP1Q9ULZ2 295 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 NEU2Q9Y3R4 380 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 KPNA7A9QM74 516 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 APRTP07741 180 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 CASP4P49662 377 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 PDK3Q15120 406 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 NCCRP1Q6ZVX7 275 aaPredicted RBP16.74■□□□□ 0.27
NPHP3-201ENST00000337331 FBXL16Q8N461 479 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 STKLD1Q8NE28 680 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 SPOCK2Q92563 424 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 TMEM120AQ9BXJ8 343 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 THAP2Q9H0W7 228 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 CNGB3Q9NQW8 809 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 AGPAT3Q9NRZ7 376 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 ZNF229Q9UJW7 825 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 SIK3Q9Y2K2 1263 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 A8MXQ7 604 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 PIK3R2O00459 728 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 TBX10O75333 385 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 MTMR2Q13614 643 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 MIIPQ5JXC2 388 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 PTF1AQ7RTS3 328 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 CCDC138Q96M89 665 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 TUBA8Q9NY65 449 aaPredicted RBP16.74■□□□□ 0.27
NPHP3-201ENST00000337331 RRN3Q9NYV6 651 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 LNPEPQ9UIQ6 1025 aa16.74■□□□□ 0.27
NPHP3-201ENST00000337331 TBC1D12O60347 775 aa16.73■□□□□ 0.27
NPHP3-201ENST00000337331 ENTPD3O75355 529 aa16.73■□□□□ 0.27
NPHP3-201ENST00000337331 MED24O75448 989 aa16.73■□□□□ 0.27
NPHP3-201ENST00000337331 INHBEP58166 350 aa16.73■□□□□ 0.27
NPHP3-201ENST00000337331 C6orf183Q5T699 404 aa16.73■□□□□ 0.27
NPHP3-201ENST00000337331 ZNF772Q68DY9 489 aaPredicted RBP16.73■□□□□ 0.27
NPHP3-201ENST00000337331 AADACL2Q6P093 401 aa16.73■□□□□ 0.27
NPHP3-201ENST00000337331 BEST2Q8NFU1 509 aa16.73■□□□□ 0.27
NPHP3-201ENST00000337331 ATG4AQ8WYN0 398 aa16.73■□□□□ 0.27
NPHP3-201ENST00000337331 SAR1AQ9NR31 198 aa16.73■□□□□ 0.27
NPHP3-201ENST00000337331 KNDC1Q76NI1 1749 aa16.73■□□□□ 0.27
NPHP3-201ENST00000337331 FOXN3O00409 490 aaPredicted RBP16.73■□□□□ 0.27
NPHP3-201ENST00000337331 EIF3DO15371 548 aaKnown RBP eCLIP16.73■□□□□ 0.27
NPHP3-201ENST00000337331 CHN2P52757 468 aa16.73■□□□□ 0.27
NPHP3-201ENST00000337331 EFNA5P52803 228 aa16.73■□□□□ 0.27
NPHP3-201ENST00000337331 CCDC15Q0P6D6 951 aa16.73■□□□□ 0.27
NPHP3-201ENST00000337331 SYDE1Q6ZW31 735 aaPredicted RBP16.73■□□□□ 0.27
NPHP3-201ENST00000337331 OR6Y1Q8NGX8 325 aa16.73■□□□□ 0.27
NPHP3-201ENST00000337331 DHX38Q92620 1227 aaKnown RBP16.73■□□□□ 0.27
NPHP3-201ENST00000337331 EME1Q96AY2 570 aa16.73■□□□□ 0.27
NPHP3-201ENST00000337331 RIT2Q99578 217 aa16.73■□□□□ 0.27
NPHP3-201ENST00000337331 KIAA0391O15091 583 aaKnown RBP16.73■□□□□ 0.27
NPHP3-201ENST00000337331 MAP4P27816 1152 aaKnown RBP16.73■□□□□ 0.27
NPHP3-201ENST00000337331 SESN2P58004 480 aaPredicted RBP16.73■□□□□ 0.27
NPHP3-201ENST00000337331 ACTR2P61160 394 aa16.73■□□□□ 0.27
NPHP3-201ENST00000337331 TAP1Q03518 808 aa16.73■□□□□ 0.27
NPHP3-201ENST00000337331 POU5F1BQ06416 359 aa16.73■□□□□ 0.27
NPHP3-201ENST00000337331 PLEKHA7Q6IQ23 1121 aa16.73■□□□□ 0.27
NPHP3-201ENST00000337331 PID1Q7Z2X4 250 aa16.73■□□□□ 0.27
NPHP3-201ENST00000337331 RCOR2Q8IZ40 523 aa16.73■□□□□ 0.27
NPHP3-201ENST00000337331 SENP7Q9BQF6 1050 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms