RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 NXPE3Q969Y0 559 aa19.17■□□□□ 0.66
SNRPA1-201ENST00000254193 PCED1BQ96HM7 432 aa19.17■□□□□ 0.66
SNRPA1-201ENST00000254193 FUBP3Q96I24 572 aaKnown RBP eCLIP19.17■□□□□ 0.66
SNRPA1-201ENST00000254193 MAGEC2Q9UBF1 373 aaPredicted RBP19.17■□□□□ 0.66
SNRPA1-201ENST00000254193 MTCL1Q9Y4B5 1905 aaKnown RBP19.16■□□□□ 0.66
SNRPA1-201ENST00000254193 BDNFP23560 247 aa19.16■□□□□ 0.66
SNRPA1-201ENST00000254193 GABRR2P28476 465 aa19.16■□□□□ 0.66
SNRPA1-201ENST00000254193 RPL10AP62906 217 aaKnown RBP19.16■□□□□ 0.66
SNRPA1-201ENST00000254193 MAPK8IP2Q13387 824 aaPredicted RBP19.16■□□□□ 0.66
SNRPA1-201ENST00000254193 ORC1Q13415 861 aa19.16■□□□□ 0.66
SNRPA1-201ENST00000254193 CCDC40Q4G0X9 1142 aa19.16■□□□□ 0.66
SNRPA1-201ENST00000254193 FAM78AQ5JUQ0 283 aa19.16■□□□□ 0.66
SNRPA1-201ENST00000254193 FOXR2Q6PJQ5 311 aa19.16■□□□□ 0.66
SNRPA1-201ENST00000254193 GAREM2Q75VX8 874 aa19.16■□□□□ 0.66
SNRPA1-201ENST00000254193 FRMD5Q7Z6J6 570 aa19.16■□□□□ 0.66
SNRPA1-201ENST00000254193 B3GALNT2Q8NCR0 500 aa19.16■□□□□ 0.66
SNRPA1-201ENST00000254193 FBXL13Q8NEE6 735 aa19.16■□□□□ 0.66
SNRPA1-201ENST00000254193 GPT2Q8TD30 523 aa19.16■□□□□ 0.66
SNRPA1-201ENST00000254193 SLC35C1Q96A29 364 aa19.16■□□□□ 0.66
SNRPA1-201ENST00000254193 ASIC4Q96FT7 647 aa19.16■□□□□ 0.66
SNRPA1-201ENST00000254193 KXD1Q9BQD3 176 aa19.16■□□□□ 0.66
SNRPA1-201ENST00000254193 ATXN3LQ9H3M9 355 aa19.16■□□□□ 0.66
SNRPA1-201ENST00000254193 METTL14Q9HCE5 456 aaKnown RBP19.16■□□□□ 0.66
SNRPA1-201ENST00000254193 RAB20Q9NX57 234 aa19.16■□□□□ 0.66
SNRPA1-201ENST00000254193 DENND4AQ7Z401 1863 aa19.16■□□□□ 0.66
SNRPA1-201ENST00000254193 PRR33A8MZF0 331 aa19.15■□□□□ 0.66
SNRPA1-201ENST00000254193 HMGA1P17096 107 aaKnown RBP19.15■□□□□ 0.66
SNRPA1-201ENST00000254193 MAGEA11P43364 429 aa19.15■□□□□ 0.66
SNRPA1-201ENST00000254193 STXBP5Q5T5C0 1151 aa19.15■□□□□ 0.66
SNRPA1-201ENST00000254193 HFE2Q6ZVN8 426 aa19.15■□□□□ 0.66
SNRPA1-201ENST00000254193 MTSS1LQ765P7 747 aa19.15■□□□□ 0.66
SNRPA1-201ENST00000254193 CCDC150Q8NCX0 1101 aa19.15■□□□□ 0.66
SNRPA1-201ENST00000254193 MED15Q96RN5 788 aa19.15■□□□□ 0.66
SNRPA1-201ENST00000254193 SRRTQ9BXP5 876 aaKnown RBP19.15■□□□□ 0.66
SNRPA1-201ENST00000254193 BCO2Q9BYV7 579 aa19.15■□□□□ 0.66
SNRPA1-201ENST00000254193 NIF3L1Q9GZT8 377 aa19.15■□□□□ 0.66
SNRPA1-201ENST00000254193 SLITRK6Q9H5Y7 841 aa19.15■□□□□ 0.66
SNRPA1-201ENST00000254193 IL21Q9HBE4 155 aa19.15■□□□□ 0.66
SNRPA1-201ENST00000254193 HMGXB4Q9UGU5 601 aa19.15■□□□□ 0.66
SNRPA1-201ENST00000254193 MAGED2Q9UNF1 606 aaPredicted RBP19.15■□□□□ 0.66
SNRPA1-201ENST00000254193 DUSP12Q9UNI6 340 aa19.15■□□□□ 0.66
SNRPA1-201ENST00000254193 GOLGA6L22H0YM25 854 aa19.14■□□□□ 0.65
SNRPA1-201ENST00000254193 CLDN5O00501 218 aa19.14■□□□□ 0.65
SNRPA1-201ENST00000254193 GRIK1P39086 918 aa19.14■□□□□ 0.65
SNRPA1-201ENST00000254193 NDST1P52848 882 aa19.14■□□□□ 0.65
SNRPA1-201ENST00000254193 TANGO2Q6ICL3 276 aa19.14■□□□□ 0.65
SNRPA1-201ENST00000254193 ACOT1Q86TX2 421 aa19.14■□□□□ 0.65
SNRPA1-201ENST00000254193 MLKLQ8NB16 471 aa19.14■□□□□ 0.65
SNRPA1-201ENST00000254193 B3GNT5Q9BYG0 378 aa19.14■□□□□ 0.65
SNRPA1-201ENST00000254193 PLA2G2FQ9BZM2 168 aa19.14■□□□□ 0.65
SNRPA1-201ENST00000254193 ZNF518BQ9C0D4 1074 aa19.14■□□□□ 0.65
SNRPA1-201ENST00000254193 RWDD2AQ9UIY3 292 aa19.14■□□□□ 0.65
SNRPA1-201ENST00000254193 SLC38A8A6NNN8 435 aa19.13■□□□□ 0.65
SNRPA1-201ENST00000254193 FGF19O95750 216 aa19.13■□□□□ 0.65
SNRPA1-201ENST00000254193 CSH1P0DML2 217 aa19.13■□□□□ 0.65
SNRPA1-201ENST00000254193 CSH2P0DML3 217 aa19.13■□□□□ 0.65
SNRPA1-201ENST00000254193 FCARP24071 287 aa19.13■□□□□ 0.65
SNRPA1-201ENST00000254193 CYP4F8P98187 520 aa19.13■□□□□ 0.65
SNRPA1-201ENST00000254193 VSTM1Q6UX27 236 aa19.13■□□□□ 0.65
SNRPA1-201ENST00000254193 GPIHBP1Q8IV16 184 aa19.13■□□□□ 0.65
SNRPA1-201ENST00000254193 ZSCAN18Q8TBC5 510 aaPredicted RBP19.13■□□□□ 0.65
SNRPA1-201ENST00000254193 SMARCD2Q92925 531 aa19.13■□□□□ 0.65
SNRPA1-201ENST00000254193 TATDN2Q93075 761 aa19.13■□□□□ 0.65
SNRPA1-201ENST00000254193 PBXIP1Q96AQ6 731 aa19.13■□□□□ 0.65
SNRPA1-201ENST00000254193 TNIP3Q96KP6 325 aa19.13■□□□□ 0.65
SNRPA1-201ENST00000254193 ASB16Q96NS5 453 aa19.13■□□□□ 0.65
SNRPA1-201ENST00000254193 CYP3A43Q9HB55 503 aa19.13■□□□□ 0.65
SNRPA1-201ENST00000254193 COQ4Q9Y3A0 265 aa19.13■□□□□ 0.65
SNRPA1-201ENST00000254193 DOCK6Q96HP0 2047 aa19.12■□□□□ 0.65
SNRPA1-201ENST00000254193 NOL4O94818 638 aa19.12■□□□□ 0.65
SNRPA1-201ENST00000254193 PDGFBP01127 241 aaPredicted RBP19.12■□□□□ 0.65
SNRPA1-201ENST00000254193 CFHP08603 1231 aa19.12■□□□□ 0.65
SNRPA1-201ENST00000254193 SRFP11831 508 aa19.12■□□□□ 0.65
SNRPA1-201ENST00000254193 CD58P19256 250 aa19.12■□□□□ 0.65
SNRPA1-201ENST00000254193 VIPR2P41587 438 aa19.12■□□□□ 0.65
SNRPA1-201ENST00000254193 CACNA2D1P54289 1103 aa19.12■□□□□ 0.65
SNRPA1-201ENST00000254193 NLRP12P59046 1061 aa19.12■□□□□ 0.65
SNRPA1-201ENST00000254193 GPC5P78333 572 aa19.12■□□□□ 0.65
SNRPA1-201ENST00000254193 DPCR1Q3MIW9 517 aa19.12■□□□□ 0.65
SNRPA1-201ENST00000254193 WDR44Q5JSH3 913 aa19.12■□□□□ 0.65
SNRPA1-201ENST00000254193 GPR158Q5T848 1215 aa19.12■□□□□ 0.65
SNRPA1-201ENST00000254193 TMEM150AQ86TG1 271 aa19.12■□□□□ 0.65
SNRPA1-201ENST00000254193 UNC93AQ86WB7 457 aa19.12■□□□□ 0.65
SNRPA1-201ENST00000254193 CRYBG2Q8N1P7 616 aa19.12■□□□□ 0.65
SNRPA1-201ENST00000254193 TWNKQ96RR1 684 aa19.12■□□□□ 0.65
SNRPA1-201ENST00000254193 GPR88Q9GZN0 384 aa19.12■□□□□ 0.65
SNRPA1-201ENST00000254193 ZFP14Q9HCL3 533 aa19.12■□□□□ 0.65
SNRPA1-201ENST00000254193 TMEM30AQ9NV96 361 aa19.12■□□□□ 0.65
SNRPA1-201ENST00000254193 FBXL21Q9UKT6 434 aa19.12■□□□□ 0.65
SNRPA1-201ENST00000254193 F8VP50 259 aa19.11■□□□□ 0.65
SNRPA1-201ENST00000254193 ECI2O75521 394 aa19.11■□□□□ 0.65
SNRPA1-201ENST00000254193 GNA14O95837 355 aa19.11■□□□□ 0.65
SNRPA1-201ENST00000254193 F11P03951 625 aa19.11■□□□□ 0.65
SNRPA1-201ENST00000254193 ANXA13P27216 316 aa19.11■□□□□ 0.65
SNRPA1-201ENST00000254193 CDC25CP30307 473 aa19.11■□□□□ 0.65
SNRPA1-201ENST00000254193 FMO5P49326 533 aa19.11■□□□□ 0.65
SNRPA1-201ENST00000254193 INCA1Q0VD86 236 aa19.11■□□□□ 0.65
SNRPA1-201ENST00000254193 ARHGAP15Q53QZ3 475 aa19.11■□□□□ 0.65
SNRPA1-201ENST00000254193 PAQR9Q6ZVX9 377 aa19.11■□□□□ 0.65
SNRPA1-201ENST00000254193 TRIM59Q8IWR1 403 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms