RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 Zkscan2G3X952 960 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Entpd2O55026 495 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Fgf18O89101 207 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Hoxa5P09021 270 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 CckbrP56481 453 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 NcstnP57716 708 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Myadml2Q08AU7 307 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Prss57Q14B24 284 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Krt26Q3TRJ4 462 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Tatdn3Q3U1C6 294 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Spire1Q52KF3 598 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Mief2Q5NCS9 454 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 IbspQ61711 324 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Gpd2Q64521 727 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Kiaa1841Q68FF0 718 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Jade3Q6IE82 823 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 FtoQ8BGW1 502 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Q8BHR8 331 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Arl14epQ8BIX3 276 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Prss50Q8BLH5 439 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Shc2Q8BMC3 573 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Leng9Q8BTN6 485 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Triml1Q8BVP1 470 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 ReltQ8BX43 436 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Q8C4P0 716 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Dennd2aQ8C4S8 1000 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Fam78aQ8C552 283 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Ccdc87Q8CDL9 855 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Sash3Q8K352 380 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Gspt1Q8R050 636 aaKnown RBP4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Nrbp1Q99J45 535 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Fuca2Q99KR8 461 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Zfp773Q9CZ29 471 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Nt5c3aQ9D020 331 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 PdiltQ9DAN1 588 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Trim54Q9ERP3 366 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 PhaxQ9JJT9 385 aaKnown RBP4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Fbxo17Q9QZM8 286 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Mtm1Q9Z2C5 603 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 DmdP11531 3678 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Ank3G5E8K5 1961 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Cyp4a29A0A087WPC3 509 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Fibcd1A2AV25 459 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Sh2d4bA6X942 431 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Gprin2D3Z1D7 455 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Ccdc175E9PVB3 822 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 MthfslL7N466 203 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Ccng2O08918 344 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Timm44O35857 452 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 CkmP07310 381 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Mthfd2P18155 350 aaKnown RBP4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 DctP29812 517 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 LifrP42703 1092 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Actr2P61161 394 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Hoxb13P70321 286 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 PcQ05920 1178 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 DeptorQ570Y9 409 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Meis1Q60954 390 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Pcbp2Q61990 362 aaKnown RBP4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 B630019K06RikQ7TNS5 333 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 SrlQ7TQ48 910 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Celf4Q7TSY6 486 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Sestd1Q80UK0 696 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Zscan4cQ80VJ6 506 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Smndc1Q8BGT7 238 aaKnown RBP4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Pi4kbQ8BKC8 816 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Hps6Q8BLY7 805 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Zbtb49Q8BXX2 756 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Serpina3bQ8BYY9 420 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Zfp120Q8BZW4 436 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 CcinQ8CDE2 588 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Pom121Q8K3Z9 1200 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Tram1l1Q8QZR0 363 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Ifih1Q8R5F7 1025 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Ces1Q8VCC2 565 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Ubac1Q8VDI7 409 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Rnf141Q99MB7 230 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Cisd2Q9CQB5 135 aaKnown RBP4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Armc9Q9D2I5 817 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Q9D2X8 372 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Gcc1Q9D4H2 778 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Drc3Q9D5E4 523 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Rpap3Q9D706 660 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Q9DAQ4 598 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 PycardQ9EPB4 193 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Aldh6a1Q9EQ20 535 aaKnown RBP4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Kcnh7Q9ER47 1195 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 PigoQ9JJI6 1093 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Ppp2r3cQ9JK24 453 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Usp18Q9WTV6 368 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Bscl2Q9Z2E9 383 aa4.75□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Plxna3P70208 1872 aa4.74□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Plxna4Q80UG2 1893 aa4.74□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Trip11E9Q512 1976 aa4.74□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Gucy2dA0A0U1RPR8 1117 aa4.74□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Ptchd4B9EKX1 904 aa4.74□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Maml3D4QGC2 1135 aa4.74□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Gm38392E9Q2A2 434 aa4.74□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 Gm3371F7CQW8 167 aa4.74□□□□□ -1.65
Hmgb1-203ENSMUST00000110505 SprtnG3X912 497 aa4.74□□□□□ -1.65
Retrieved 100 of 22,080 RNA–protein pairs in 59 ms