RNA–Protein interactions for RNA: YPR158C-D

YPR158C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YPR158C-D, Length 5,268 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR158C-D	YPR158C-D	SHG1	P38337	142 aa		2.59	□□□□□ -2
YPR158C-D	YPR158C-D	YMR030W-A	Q3E760	96 aa		2.59	□□□□□ -2
YPR158C-D	YPR158C-D	MDM10	P18409	493 aa		2.59	□□□□□ -2
YPR158C-D	YPR158C-D	ORM2	Q06144	216 aa		2.59	□□□□□ -2
YPR158C-D	YPR158C-D	APC9	Q12107	265 aa		2.59	□□□□□ -2
YPR158C-D	YPR158C-D	UBC11	P52492	156 aa		2.58	□□□□□ -2
YPR158C-D	YPR158C-D	SYM1	Q06563	197 aa		2.58	□□□□□ -2
YPR158C-D	YPR158C-D	SPG1	P50088	95 aa		2.58	□□□□□ -2
YPR158C-D	YPR158C-D	YBR209W	P38311	105 aa		2.58	□□□□□ -2
YPR158C-D	YPR158C-D	GPI14	P47088	403 aa	Known RBP	2.58	□□□□□ -2
YPR158C-D	YPR158C-D	SAY1	P53324	424 aa		2.58	□□□□□ -2
YPR158C-D	YPR158C-D	YPR013C	Q12145	317 aa		2.58	□□□□□ -2
YPR158C-D	YPR158C-D	TOA2	P32774	122 aa		2.58	□□□□□ -2
YPR158C-D	YPR158C-D	YNL217W	P40152	326 aa		2.58	□□□□□ -2
YPR158C-D	YPR158C-D	YPS5	P53057	165 aa		2.58	□□□□□ -2
YPR158C-D	YPR158C-D	RPS22B	Q3E7Y3	130 aa	Known RBP	2.58	□□□□□ -2
YPR158C-D	YPR158C-D	YML054C-A	Q3E809	52 aa		2.58	□□□□□ -2
YPR158C-D	YPR158C-D	CPT1	P17898	393 aa		2.57	□□□□□ -2
YPR158C-D	YPR158C-D	YGL235W	P53071	178 aa		2.57	□□□□□ -2
YPR158C-D	YPR158C-D	ZEO1	Q08245	113 aa		2.57	□□□□□ -2
YPR158C-D	YPR158C-D	YLR422W	Q06409	1932 aa		2.57	□□□□□ -2
YPR158C-D	YPR158C-D	CAP2	P13517	287 aa		2.57	□□□□□ -2
YPR158C-D	YPR158C-D	PPQ1	P32945	549 aa		2.57	□□□□□ -2
YPR158C-D	YPR158C-D	YFL012W	P43580	148 aa		2.57	□□□□□ -2
YPR158C-D	YPR158C-D	SFK1	P35735	353 aa		2.57	□□□□□ -2
YPR158C-D	YPR158C-D	YNR066C	P53752	436 aa		2.57	□□□□□ -2
YPR158C-D	YPR158C-D	MRPL35	Q06678	367 aa		2.57	□□□□□ -2
YPR158C-D	YPR158C-D	CTR3	Q06686	241 aa		2.57	□□□□□ -2
YPR158C-D	YPR158C-D	YDL241W	Q07738	123 aa		2.57	□□□□□ -2
YPR158C-D	YPR158C-D	PTP2	P29461	750 aa		2.57	□□□□□ -2
YPR158C-D	YPR158C-D	FMT1	P32785	401 aa		2.57	□□□□□ -2
YPR158C-D	YPR158C-D	ATC1	Q04005	294 aa		2.57	□□□□□ -2
YPR158C-D	YPR158C-D	MGR3	Q04472	501 aa		2.57	□□□□□ -2
YPR158C-D	YPR158C-D	ARC15	P40518	154 aa	RIP-Chip data	2.56	□□□□□ -2	not detected
YPR158C-D	YPR158C-D	MRP1	P10662	321 aa	Known RBP	2.56	□□□□□ -2
YPR158C-D	YPR158C-D	PDX3	P38075	228 aa	Known RBP	2.56	□□□□□ -2
YPR158C-D	YPR158C-D	SYS1	P41544	203 aa		2.56	□□□□□ -2
YPR158C-D	YPR158C-D	YJL118W	P47022	219 aa		2.56	□□□□□ -2
YPR158C-D	YPR158C-D	YHR139C-A	O13536	103 aa		2.56	□□□□□ -2
YPR158C-D	YPR158C-D	VMA3	P25515	160 aa		2.56	□□□□□ -2
YPR158C-D	YPR158C-D	MBB1	P39534	108 aa		2.56	□□□□□ -2
YPR158C-D	YPR158C-D	BOR1	P53838	576 aa		2.56	□□□□□ -2
YPR158C-D	YPR158C-D	TMA23	Q03525	211 aa		2.56	□□□□□ -2
YPR158C-D	YPR158C-D	FCF1	Q05498	189 aa	Predicted RBP	2.56	□□□□□ -2
YPR158C-D	YPR158C-D	DGA1	Q08650	418 aa		2.56	□□□□□ -2
YPR158C-D	YPR158C-D	MRPL31	P14063	131 aa	Predicted RBP	2.56	□□□□□ -2
YPR158C-D	YPR158C-D	NTF2	P33331	125 aa	Known RBP	2.56	□□□□□ -2
YPR158C-D	YPR158C-D	APS1	P35181	156 aa		2.56	□□□□□ -2
YPR158C-D	YPR158C-D	PAU12	P53343	120 aa		2.56	□□□□□ -2
YPR158C-D	YPR158C-D	YMR244W	Q04018	355 aa		2.56	□□□□□ -2
YPR158C-D	YPR158C-D	WIP1	Q2V2P8	89 aa		2.56	□□□□□ -2
YPR158C-D	YPR158C-D	CDC7	P06243	507 aa		2.55	□□□□□ -2
YPR158C-D	YPR158C-D	CSH1	P38287	376 aa		2.55	□□□□□ -2
YPR158C-D	YPR158C-D	FPR2	P32472	135 aa		2.55	□□□□□ -2
YPR158C-D	YPR158C-D	YHR022C	P38763	256 aa		2.55	□□□□□ -2
YPR158C-D	YPR158C-D	OXA1	P39952	402 aa		2.55	□□□□□ -2
YPR158C-D	YPR158C-D	DAD3	P69850	94 aa		2.55	□□□□□ -2
YPR158C-D	YPR158C-D	MRX11	Q03079	207 aa		2.55	□□□□□ -2
YPR158C-D	YPR158C-D	YPT53	P36019	220 aa		2.55	□□□□□ -2
YPR158C-D	YPR158C-D	POP8	P38208	133 aa		2.55	□□□□□ -2
YPR158C-D	YPR158C-D	YER076C	P40049	302 aa		2.55	□□□□□ -2
YPR158C-D	YPR158C-D	YMR175W-A	Q3E766	64 aa		2.55	□□□□□ -2
YPR158C-D	YPR158C-D	YBL039W-B	P0C268	59 aa		2.55	□□□□□ -2
YPR158C-D	YPR158C-D	AIM34	Q03673	198 aa		2.55	□□□□□ -2
YPR158C-D	YPR158C-D	RNH202	Q05635	350 aa		2.55	□□□□□ -2
YPR158C-D	YPR158C-D	PBP4	Q07362	185 aa	Known RBP	2.55	□□□□□ -2
YPR158C-D	YPR158C-D	RPL42A	P0CX27	106 aa	Known RBP	2.54	□□□□□ -2
YPR158C-D	YPR158C-D	RPL42B	P0CX28	106 aa	Known RBP	2.54	□□□□□ -2
YPR158C-D	YPR158C-D	INO4	P13902	151 aa		2.54	□□□□□ -2
YPR158C-D	YPR158C-D	CDC10	P25342	322 aa	Known RBP	2.54	□□□□□ -2
YPR158C-D	YPR158C-D	MIC27	P50945	234 aa		2.54	□□□□□ -2
YPR158C-D	YPR158C-D	YML079W	Q03629	201 aa		2.54	□□□□□ -2
YPR158C-D	YPR158C-D	YOR268C	Q08734	132 aa		2.54	□□□□□ -2
YPR158C-D	YPR158C-D	ATP6	P00854	259 aa		2.54	□□□□□ -2
YPR158C-D	YPR158C-D	URM1	P40554	99 aa	Predicted RBP	2.54	□□□□□ -2
YPR158C-D	YPR158C-D	COX9	P07255	59 aa		2.54	□□□□□ -2
YPR158C-D	YPR158C-D	FCY2	P17064	533 aa		2.54	□□□□□ -2
YPR158C-D	YPR158C-D	TIP1	P27654	210 aa	Predicted RBP	2.54	□□□□□ -2
YPR158C-D	YPR158C-D	SPT14	P32363	452 aa		2.54	□□□□□ -2
YPR158C-D	YPR158C-D	AIM20	P40451	204 aa		2.54	□□□□□ -2
YPR158C-D	YPR158C-D	YLR099W-A	Q3E798	87 aa		2.54	□□□□□ -2
YPR158C-D	YPR158C-D	RRG9	P40156	214 aa		2.54	□□□□□ -2
YPR158C-D	YPR158C-D	GTO3	Q04806	366 aa		2.54	□□□□□ -2
YPR158C-D	YPR158C-D	YNL042W-B	Q3E7Z2	85 aa		2.54	□□□□□ -2
YPR158C-D	YPR158C-D	AQY2	P0CD90	149 aa		2.53	□□□□□ -2
YPR158C-D	YPR158C-D	MATALPHA1	P0CY06	175 aa		2.53	□□□□□ -2
YPR158C-D	YPR158C-D	HMLALPHA1	P0CY07	175 aa		2.53	□□□□□ -2
YPR158C-D	YPR158C-D	GPI11	Q06636	219 aa		2.53	□□□□□ -2
YPR158C-D	YPR158C-D	YPL261C	Q08976	102 aa		2.53	□□□□□ -2
YPR158C-D	YPR158C-D	TAF3	Q12297	353 aa		2.53	□□□□□ -2
YPR158C-D	YPR158C-D	MIC26	P50087	233 aa		2.53	□□□□□ -2
YPR158C-D	YPR158C-D	YOL160W	Q08321	113 aa		2.53	□□□□□ -2
YPR158C-D	YPR158C-D	YER134C	P40081	178 aa		2.53	□□□□□ -2.01
YPR158C-D	YPR158C-D	YBR182C-A	Q8TGU6	64 aa		2.53	□□□□□ -2.01
YPR158C-D	YPR158C-D	QCR7	P00128	127 aa		2.52	□□□□□ -2.01
YPR158C-D	YPR158C-D	YHL005C	P38752	130 aa		2.52	□□□□□ -2.01
YPR158C-D	YPR158C-D	IGD1	P43598	195 aa		2.52	□□□□□ -2.01
YPR158C-D	YPR158C-D	FIP1	P45976	327 aa		2.52	□□□□□ -2.01
YPR158C-D	YPR158C-D	DAN1	P47178	298 aa		2.52	□□□□□ -2.01
YPR158C-D	YPR158C-D	PDR17	P53844	350 aa		2.52	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms