RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeastyeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDH1YPR002W YCR007CP25354 239 aa4.5□□□□□ -1.69
PDH1YPR002W RPS2P25443 254 aaKnown RBP4.5□□□□□ -1.69
PDH1YPR002W RAD23P32628 398 aaKnown RBP4.5□□□□□ -1.69
PDH1YPR002W ELF1P36053 145 aa4.5□□□□□ -1.69
PDH1YPR002W YGL230CP53074 147 aa4.5□□□□□ -1.69
PDH1YPR002W CWC27Q02770 301 aa4.5□□□□□ -1.69
PDH1YPR002W POS5Q06892 414 aa4.5□□□□□ -1.69
PDH1YPR002W PIS1P06197 220 aaKnown RBP4.49□□□□□ -1.69
PDH1YPR002W DFR1P07807 211 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
PDH1YPR002W ZRT1P32804 376 aa4.49□□□□□ -1.69
PDH1YPR002W FYV4P38783 130 aaPredicted RBP4.49□□□□□ -1.69
PDH1YPR002W YJL118WP47022 219 aa4.49□□□□□ -1.69
PDH1YPR002W RAV2Q03956 351 aa4.49□□□□□ -1.69
PDH1YPR002W API2Q04413 109 aa4.49□□□□□ -1.69
PDH1YPR002W YDR114CQ04597 100 aa4.49□□□□□ -1.69
PDH1YPR002W LIP2Q06005 328 aa4.49□□□□□ -1.69
PDH1YPR002W YIL002W-AQ3E7Z5 69 aa4.49□□□□□ -1.69
PDH1YPR002W Q0144Q9ZZW2 109 aa4.49□□□□□ -1.69
PDH1YPR002W IRA2P19158 3079 aa4.49□□□□□ -1.69
PDH1YPR002W YLR302CO13544 120 aa4.48□□□□□ -1.69
PDH1YPR002W HTB1P02293 131 aaKnown RBP4.48□□□□□ -1.69
PDH1YPR002W HTB2P02294 131 aa4.48□□□□□ -1.69
PDH1YPR002W HAC1P41546 238 aa4.48□□□□□ -1.69
PDH1YPR002W YGL118CP53132 145 aa4.48□□□□□ -1.69
PDH1YPR002W YDR366CP87287 132 aa4.48□□□□□ -1.69
PDH1YPR002W GIM5Q04493 163 aa4.48□□□□□ -1.69
PDH1YPR002W FIT2Q08906 153 aa4.48□□□□□ -1.69
PDH1YPR002W RKI1Q12189 258 aa4.48□□□□□ -1.69
PDH1YPR002W RFM1Q12192 310 aa4.48□□□□□ -1.69
PDH1YPR002W CSH1P38287 376 aa4.48□□□□□ -1.69
PDH1YPR002W YNL200CP40165 246 aaKnown RBP4.48□□□□□ -1.69
PDH1YPR002W TDA4P47153 279 aa4.48□□□□□ -1.69
PDH1YPR002W SIP18P50263 79 aa4.48□□□□□ -1.69
PDH1YPR002W NUP53Q03790 475 aa4.48□□□□□ -1.69
PDH1YPR002W ADH2P00331 348 aaKnown RBP4.47□□□□□ -1.69
PDH1YPR002W COX2P00410 251 aa4.47□□□□□ -1.69
PDH1YPR002W NOP1P15646 327 aaKnown RBP4.47□□□□□ -1.69
PDH1YPR002W HSP12P22943 109 aaKnown RBP4.47□□□□□ -1.69
PDH1YPR002W FEN2P25621 512 aaKnown RBP4.47□□□□□ -1.69
PDH1YPR002W FZF1P32805 299 aa4.47□□□□□ -1.69
PDH1YPR002W BDH1P39714 382 aa4.47□□□□□ -1.69
PDH1YPR002W YFL015CP43578 164 aa4.47□□□□□ -1.69
PDH1YPR002W YDL183CP48569 320 aa4.47□□□□□ -1.69
PDH1YPR002W YGR017WP53210 297 aa4.47□□□□□ -1.69
PDH1YPR002W YGR018CP53211 109 aa4.47□□□□□ -1.69
PDH1YPR002W THG1P53215 237 aaKnown RBP4.47□□□□□ -1.69
PDH1YPR002W YNR064CP53750 290 aa4.47□□□□□ -1.69
PDH1YPR002W UPS3Q04006 179 aa4.47□□□□□ -1.69
PDH1YPR002W IZH3Q07959 543 aa4.47□□□□□ -1.69
PDH1YPR002W YOS1Q3E834 85 aa4.47□□□□□ -1.69
PDH1YPR002W MBF1O14467 151 aaKnown RBP4.46□□□□□ -1.7
PDH1YPR002W CYC3P06182 269 aa4.46□□□□□ -1.7
PDH1YPR002W CUP1-1P0CX80 61 aa4.46□□□□□ -1.7
PDH1YPR002W CUP1-2P0CX81 61 aa4.46□□□□□ -1.7
PDH1YPR002W YCR022CP25620 114 aa4.46□□□□□ -1.7
PDH1YPR002W AGE2P40529 298 aa4.46□□□□□ -1.7
PDH1YPR002W SDS23P53172 527 aa4.46□□□□□ -1.7
PDH1YPR002W TOM7P53507 60 aa4.46□□□□□ -1.7
PDH1YPR002W SWT21P53873 357 aaPredicted RBP4.46□□□□□ -1.7
PDH1YPR002W GRH1Q04410 372 aaKnown RBP4.46□□□□□ -1.7
PDH1YPR002W FSF1Q12029 327 aaKnown RBP4.46□□□□□ -1.7
PDH1YPR002W ATO3Q12359 275 aa4.46□□□□□ -1.7
PDH1YPR002W FMP27Q06179 2628 aa4.46□□□□□ -1.7
PDH1YPR002W RPL23AP0CX41 137 aaKnown RBP4.45□□□□□ -1.7
PDH1YPR002W RPL23BP0CX42 137 aaKnown RBP4.45□□□□□ -1.7
PDH1YPR002W MRPL31P14063 131 aaPredicted RBP4.45□□□□□ -1.7
PDH1YPR002W DAL82P21705 255 aa4.45□□□□□ -1.7
PDH1YPR002W MSL1P40567 111 aaPredicted RBP4.45□□□□□ -1.7
PDH1YPR002W SSU72P53538 206 aaPredicted RBP4.45□□□□□ -1.7
PDH1YPR002W YNR071CP53757 342 aa4.45□□□□□ -1.7
PDH1YPR002W MRX11Q03079 207 aa4.45□□□□□ -1.7
PDH1YPR002W GAT3Q07928 141 aa4.45□□□□□ -1.7
PDH1YPR002W YOR029WQ12243 111 aa4.45□□□□□ -1.7
PDH1YPR002W DDI2P0CH63 225 aa4.44□□□□□ -1.7
PDH1YPR002W DDI3P0CH64 225 aa4.44□□□□□ -1.7
PDH1YPR002W YFL068WP0CX99 160 aa4.44□□□□□ -1.7
PDH1YPR002W YLL066W-AP0CY00 160 aa4.44□□□□□ -1.7
PDH1YPR002W YLL067W-AP0CY01 160 aa4.44□□□□□ -1.7
PDH1YPR002W PRE1P22141 198 aaKnown RBP4.44□□□□□ -1.7
PDH1YPR002W RPI1P23250 407 aaKnown RBP4.44□□□□□ -1.7
PDH1YPR002W LSM2P38203 95 aaKnown RBP4.44□□□□□ -1.7
PDH1YPR002W DOG2P38773 246 aa4.44□□□□□ -1.7
PDH1YPR002W HUA1P40325 198 aa4.44□□□□□ -1.7
PDH1YPR002W MSC3Q05812 728 aa4.44□□□□□ -1.7
PDH1YPR002W RNH203Q12338 110 aa4.44□□□□□ -1.7
PDH1YPR002W SCS22Q6Q595 175 aa4.44□□□□□ -1.7
PDH1YPR002W MRS1P07266 363 aa4.44□□□□□ -1.7
PDH1YPR002W MRP49P32388 137 aa4.44□□□□□ -1.7
PDH1YPR002W YKR070WP36151 352 aaKnown RBP4.44□□□□□ -1.7
PDH1YPR002W PRS4P38063 326 aaPredicted RBP4.44□□□□□ -1.7
PDH1YPR002W YPT10P38146 199 aa4.44□□□□□ -1.7
PDH1YPR002W YBL071CP38185 102 aa4.44□□□□□ -1.7
PDH1YPR002W SEC72P39742 193 aaKnown RBP4.44□□□□□ -1.7
PDH1YPR002W PIR5P46999 287 aa4.44□□□□□ -1.7
PDH1YPR002W MIC26P50087 233 aa4.44□□□□□ -1.7
PDH1YPR002W RUB1Q03919 77 aa4.44□□□□□ -1.7
PDH1YPR002W ARC18Q05933 178 aaKnown RBP4.44□□□□□ -1.7
PDH1YPR002W YLR050CQ12155 161 aaKnown RBP4.44□□□□□ -1.7
PDH1YPR002W CPT1P17898 393 aa4.43□□□□□ -1.7
PDH1YPR002W YPS1P32329 569 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 67.4 ms