RNA–Protein interactions for RNA: YPL003W

ULA1, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene ULA1, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ULA1	YPL003W	COX2	P00410	251 aa		4.23	□□□□□ -1.73
ULA1	YPL003W	POF1	P25576	258 aa		4.23	□□□□□ -1.73
ULA1	YPL003W	RPB9	P27999	122 aa		4.23	□□□□□ -1.73
ULA1	YPL003W	MIA40	P36046	403 aa		4.23	□□□□□ -1.73
ULA1	YPL003W	PRS4	P38063	326 aa	Predicted RBP	4.23	□□□□□ -1.73
ULA1	YPL003W	YHR173C	P38864	112 aa		4.23	□□□□□ -1.73
ULA1	YPL003W	HST4	P53688	370 aa		4.23	□□□□□ -1.73
ULA1	YPL003W	SWT21	P53873	357 aa	Predicted RBP	4.23	□□□□□ -1.73
ULA1	YPL003W	APS2	Q00381	147 aa		4.23	□□□□□ -1.73
ULA1	YPL003W	YMR166C	Q03829	368 aa		4.23	□□□□□ -1.73
ULA1	YPL003W	YOP1	Q12402	180 aa		4.23	□□□□□ -1.73
ULA1	YPL003W	RPL15A	P05748	204 aa	Known RBP	4.22	□□□□□ -1.73
ULA1	YPL003W	DDI2	P0CH63	225 aa		4.22	□□□□□ -1.73
ULA1	YPL003W	DDI3	P0CH64	225 aa		4.22	□□□□□ -1.73
ULA1	YPL003W	YPS1	P32329	569 aa		4.22	□□□□□ -1.73
ULA1	YPL003W	YGR026W	P53217	278 aa		4.22	□□□□□ -1.73
ULA1	YPL003W	RPL15B	P54780	204 aa	Predicted RBP	4.22	□□□□□ -1.73
ULA1	YPL003W	PBP4	Q07362	185 aa	Known RBP	4.22	□□□□□ -1.73
ULA1	YPL003W	SRL1	Q08673	210 aa		4.22	□□□□□ -1.73
ULA1	YPL003W	FIT2	Q08906	153 aa		4.22	□□□□□ -1.73
ULA1	YPL003W	AYT1	Q12226	474 aa		4.22	□□□□□ -1.73
ULA1	YPL003W	SMT3	Q12306	101 aa	Known RBP	4.22	□□□□□ -1.73
ULA1	YPL003W	DCN1	Q12395	269 aa		4.22	□□□□□ -1.73
ULA1	YPL003W	YHR213W	P0CI67	198 aa		4.21	□□□□□ -1.74
ULA1	YPL003W	YCL042W	P25572	119 aa		4.21	□□□□□ -1.74
ULA1	YPL003W	SRP21	P32342	167 aa		4.21	□□□□□ -1.74
ULA1	YPL003W	TIR2	P33890	251 aa		4.21	□□□□□ -1.74
ULA1	YPL003W	PHD1	P36093	366 aa		4.21	□□□□□ -1.74
ULA1	YPL003W	PAU5	P43575	122 aa		4.21	□□□□□ -1.74
ULA1	YPL003W	HIT1	P46973	164 aa		4.21	□□□□□ -1.74
ULA1	YPL003W	YGR219W	P53307	113 aa		4.21	□□□□□ -1.74
ULA1	YPL003W	CPD1	P53314	239 aa		4.21	□□□□□ -1.74
ULA1	YPL003W	FYV6	P53913	173 aa		4.21	□□□□□ -1.74
ULA1	YPL003W	OCA2	P53949	197 aa		4.21	□□□□□ -1.74
ULA1	YPL003W	NAT3	Q06504	195 aa		4.21	□□□□□ -1.74
ULA1	YPL003W	CYC3	P06182	269 aa		4.2	□□□□□ -1.74
ULA1	YPL003W	MRS1	P07266	363 aa		4.2	□□□□□ -1.74
ULA1	YPL003W	PAU19	P0CE85	124 aa		4.2	□□□□□ -1.74
ULA1	YPL003W	PAU21	P0CE86	164 aa		4.2	□□□□□ -1.74
ULA1	YPL003W	PAU22	P0CE87	164 aa		4.2	□□□□□ -1.74
ULA1	YPL003W	PAU3	P25610	124 aa		4.2	□□□□□ -1.74
ULA1	YPL003W	INO2	P26798	304 aa		4.2	□□□□□ -1.74
ULA1	YPL003W	LSM2	P38203	95 aa	Known RBP	4.2	□□□□□ -1.74
ULA1	YPL003W	YBR013C	P38215	129 aa		4.2	□□□□□ -1.74
ULA1	YPL003W	IRC22	P40006	225 aa		4.2	□□□□□ -1.74
ULA1	YPL003W	YER188W	P40103	239 aa		4.2	□□□□□ -1.74
ULA1	YPL003W	YIL163C	P40448	117 aa		4.2	□□□□□ -1.74
ULA1	YPL003W	SPG4	Q04438	115 aa		4.2	□□□□□ -1.74
ULA1	YPL003W	IRC23	Q08416	157 aa		4.2	□□□□□ -1.74
ULA1	YPL003W	ATX2	Q12067	313 aa		4.2	□□□□□ -1.74
ULA1	YPL003W	MIC12	P38341	106 aa		4.19	□□□□□ -1.74
ULA1	YPL003W	SUR2	P38992	349 aa		4.19	□□□□□ -1.74
ULA1	YPL003W	POR2	P40478	281 aa		4.19	□□□□□ -1.74
ULA1	YPL003W	WWM1	P43582	211 aa	Known RBP	4.19	□□□□□ -1.74
ULA1	YPL003W	CAB4	P53332	305 aa		4.19	□□□□□ -1.74
ULA1	YPL003W	ATP19	P81451	68 aa		4.19	□□□□□ -1.74
ULA1	YPL003W	UBC7	Q02159	165 aa		4.19	□□□□□ -1.74
ULA1	YPL003W	TIM18	Q08749	192 aa		4.19	□□□□□ -1.74
ULA1	YPL003W	STF1	P01098	86 aa		4.18	□□□□□ -1.74
ULA1	YPL003W	MRPL20	P22354	195 aa	Predicted RBP	4.18	□□□□□ -1.74
ULA1	YPL003W	YGL010W	P25338	174 aa		4.18	□□□□□ -1.74
ULA1	YPL003W	YPT10	P38146	199 aa		4.18	□□□□□ -1.74
ULA1	YPL003W	IMP2	P46972	177 aa		4.18	□□□□□ -1.74
ULA1	YPL003W	VPS55	P47111	140 aa		4.18	□□□□□ -1.74
ULA1	YPL003W	YGL185C	P53100	379 aa		4.18	□□□□□ -1.74
ULA1	YPL003W	YML122C	Q03207	126 aa		4.18	□□□□□ -1.74
ULA1	YPL003W	YOR105W	Q08504	108 aa		4.18	□□□□□ -1.74
ULA1	YPL003W	LAS17	Q12446	633 aa		4.18	□□□□□ -1.74
ULA1	YPL003W	CMC2	Q3E7A4	109 aa		4.18	□□□□□ -1.74
ULA1	YPL003W	YLR302C	O13544	120 aa		4.17	□□□□□ -1.74
ULA1	YPL003W	TIR1	P10863	254 aa		4.17	□□□□□ -1.74
ULA1	YPL003W	QRI5	P32344	111 aa		4.17	□□□□□ -1.74
ULA1	YPL003W	SNF11	P38956	169 aa		4.17	□□□□□ -1.74
ULA1	YPL003W	SRP14	P38985	146 aa		4.17	□□□□□ -1.74
ULA1	YPL003W	MBB1	P39534	108 aa		4.17	□□□□□ -1.74
ULA1	YPL003W	LSM4	P40070	187 aa	Known RBP	4.17	□□□□□ -1.74
ULA1	YPL003W	YNL194C	P40169	301 aa		4.17	□□□□□ -1.74
ULA1	YPL003W	YIL077C	P40508	320 aa		4.17	□□□□□ -1.74
ULA1	YPL003W	YJL027C	P47063	138 aa	Predicted RBP	4.17	□□□□□ -1.74
ULA1	YPL003W	TOM7	P53507	60 aa		4.17	□□□□□ -1.74
ULA1	YPL003W	RAV2	Q03956	351 aa		4.17	□□□□□ -1.74
ULA1	YPL003W	HTB2	P02294	131 aa		4.16	□□□□□ -1.74
ULA1	YPL003W	RPL31B	P0C2H9	113 aa	Known RBP	4.16	□□□□□ -1.74
ULA1	YPL003W	HMRA1	P0CY11	126 aa		4.16	□□□□□ -1.74
ULA1	YPL003W	YNK1	P36010	153 aa	Known RBP	4.16	□□□□□ -1.74
ULA1	YPL003W	DAD2	P36162	133 aa		4.16	□□□□□ -1.74
ULA1	YPL003W	AME1	P38313	324 aa		4.16	□□□□□ -1.74
ULA1	YPL003W	SNU13	P39990	126 aa	Known RBP	4.16	□□□□□ -1.74
ULA1	YPL003W	GLE2	P40066	365 aa		4.16	□□□□□ -1.74
ULA1	YPL003W	YPI1	P43587	155 aa		4.16	□□□□□ -1.74
ULA1	YPL003W	YDL183C	P48569	320 aa		4.16	□□□□□ -1.74
ULA1	YPL003W	HOR7	Q05827	59 aa		4.16	□□□□□ -1.74
ULA1	YPL003W	YIL002W-A	Q3E7Z5	69 aa		4.16	□□□□□ -1.74
ULA1	YPL003W	YNR034W-A	Q3E841	98 aa		4.16	□□□□□ -1.74
ULA1	YPL003W	YCL001W-B	Q96VH2	84 aa		4.16	□□□□□ -1.74
ULA1	YPL003W	CCW14	O13547	238 aa		4.15	□□□□□ -1.74
ULA1	YPL003W	GET2	P40056	285 aa		4.15	□□□□□ -1.74
ULA1	YPL003W	TOS8	P53147	276 aa		4.15	□□□□□ -1.74
ULA1	YPL003W	DAD4	P69851	72 aa		4.15	□□□□□ -1.74
ULA1	YPL003W	ARL3	Q02804	198 aa		4.15	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 82.1 ms