RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C YHR180WP38868 163 aa2.34□□□□□ -2.03
HRD1YOL013C PGD1P40356 397 aa2.34□□□□□ -2.03
HRD1YOL013C SFT1P43682 97 aa2.34□□□□□ -2.03
HRD1YOL013C BUD25P85052 153 aa2.34□□□□□ -2.03
HRD1YOL013C LDB18Q07887 179 aa2.34□□□□□ -2.03
HRD1YOL013C ATP14Q12349 124 aa2.34□□□□□ -2.03
HRD1YOL013C ROM2P51862 1356 aaKnown RBP2.34□□□□□ -2.03
HRD1YOL013C VMA7P39111 118 aa2.34□□□□□ -2.04
HRD1YOL013C SPC25P40014 221 aa2.34□□□□□ -2.04
HRD1YOL013C AYR1P40471 297 aa2.34□□□□□ -2.04
HRD1YOL013C YNR062CP53748 327 aa2.34□□□□□ -2.04
HRD1YOL013C YKR005CQ02203 525 aa2.34□□□□□ -2.04
HRD1YOL013C EST3Q03096 181 aa2.34□□□□□ -2.04
HRD1YOL013C YNL277W-AQ3E7Z0 62 aa2.34□□□□□ -2.04
HRD1YOL013C FIG2P25653 1609 aa2.34□□□□□ -2.04
HRD1YOL013C MSW1P04803 379 aa2.33□□□□□ -2.04
HRD1YOL013C LYS2P07702 1392 aa2.33□□□□□ -2.04
HRD1YOL013C PHO85P17157 305 aa2.33□□□□□ -2.04
HRD1YOL013C YCR101CP25607 182 aa2.33□□□□□ -2.04
HRD1YOL013C TFC1P32367 649 aa2.33□□□□□ -2.04
HRD1YOL013C LHP1P33399 275 aaKnown RBP2.33□□□□□ -2.04
HRD1YOL013C RPL14AP36105 138 aaKnown RBP2.33□□□□□ -2.04
HRD1YOL013C SHB17P36136 271 aaKnown RBP2.33□□□□□ -2.04
HRD1YOL013C YHL026CP38740 315 aa2.33□□□□□ -2.04
HRD1YOL013C RPL14BP38754 138 aaKnown RBP2.33□□□□□ -2.04
HRD1YOL013C YER084WP40057 128 aa2.33□□□□□ -2.04
HRD1YOL013C ALB1P47019 175 aaPredicted RBP2.33□□□□□ -2.04
HRD1YOL013C YJL027CP47063 138 aaPredicted RBP2.33□□□□□ -2.04
HRD1YOL013C YGR026WP53217 278 aa2.33□□□□□ -2.04
HRD1YOL013C YNR077CP53758 84 aa2.33□□□□□ -2.04
HRD1YOL013C YMR253CQ04835 414 aa2.33□□□□□ -2.04
HRD1YOL013C SYM1Q06563 197 aa2.33□□□□□ -2.04
HRD1YOL013C FSF1Q12029 327 aaKnown RBP2.33□□□□□ -2.04
HRD1YOL013C BOL1Q3E793 110 aa2.33□□□□□ -2.04
HRD1YOL013C FLO1P32768 1537 aa2.32□□□□□ -2.04
HRD1YOL013C ADK1P07170 222 aaKnown RBP2.32□□□□□ -2.04
HRD1YOL013C RPC19P28000 142 aaKnown RBP2.32□□□□□ -2.04
HRD1YOL013C SUI1P32911 108 aaKnown RBP2.32□□□□□ -2.04
HRD1YOL013C UTP11P34247 250 aaPredicted RBP2.32□□□□□ -2.04
HRD1YOL013C PAM17P36147 197 aa2.32□□□□□ -2.04
HRD1YOL013C UMP1P38293 148 aa2.32□□□□□ -2.04
HRD1YOL013C NSA2P40078 261 aaKnown RBP2.32□□□□□ -2.04
HRD1YOL013C YFL012WP43580 148 aa2.32□□□□□ -2.04
HRD1YOL013C DOC1P53068 250 aa2.32□□□□□ -2.04
HRD1YOL013C VPS28Q02767 242 aa2.32□□□□□ -2.04
HRD1YOL013C YPR063CQ12160 140 aa2.32□□□□□ -2.04
HRD1YOL013C RPS23AP0CX29 145 aaKnown RBP2.31□□□□□ -2.04
HRD1YOL013C RPS23BP0CX30 145 aa2.31□□□□□ -2.04
HRD1YOL013C AHT1P29589 182 aa2.31□□□□□ -2.04
HRD1YOL013C RRT1P38192 103 aa2.31□□□□□ -2.04
HRD1YOL013C YNL033WP53964 284 aa2.31□□□□□ -2.04
HRD1YOL013C YNL019CP53975 284 aa2.31□□□□□ -2.04
HRD1YOL013C MRPS8Q03799 155 aa2.31□□□□□ -2.04
HRD1YOL013C YDR102CQ03864 110 aa2.31□□□□□ -2.04
HRD1YOL013C RIM9Q04734 239 aa2.31□□□□□ -2.04
HRD1YOL013C YLR118CQ12354 227 aa2.31□□□□□ -2.04
HRD1YOL013C SOD1P00445 154 aaKnown RBP2.31□□□□□ -2.04
HRD1YOL013C RAD6P06104 172 aa2.31□□□□□ -2.04
HRD1YOL013C FZF1P32805 299 aa2.31□□□□□ -2.04
HRD1YOL013C SNC2P33328 115 aa2.31□□□□□ -2.04
HRD1YOL013C CUP9P41817 306 aa2.31□□□□□ -2.04
HRD1YOL013C AIM36Q03798 255 aa2.31□□□□□ -2.04
HRD1YOL013C YPR114WQ06107 315 aa2.31□□□□□ -2.04
HRD1YOL013C ANT1Q06497 328 aa2.31□□□□□ -2.04
HRD1YOL013C YOR289WQ12012 251 aaPredicted RBP2.31□□□□□ -2.04
HRD1YOL013C DDR48P18899 430 aaKnown RBP2.3□□□□□ -2.04
HRD1YOL013C MRS4P23500 304 aa2.3□□□□□ -2.04
HRD1YOL013C YBL010CP32788 280 aa2.3□□□□□ -2.04
HRD1YOL013C MYO1P08964 1928 aa2.29□□□□□ -2.04
HRD1YOL013C HSP12P22943 109 aaKnown RBP2.29□□□□□ -2.04
HRD1YOL013C APS2Q00381 147 aa2.29□□□□□ -2.04
HRD1YOL013C YMR295CQ03559 197 aa2.29□□□□□ -2.04
HRD1YOL013C SHH3Q04487 196 aa2.29□□□□□ -2.04
HRD1YOL013C DDI2P0CH63 225 aa2.28□□□□□ -2.04
HRD1YOL013C DDI3P0CH64 225 aa2.28□□□□□ -2.04
HRD1YOL013C YDR391CQ04170 232 aa2.28□□□□□ -2.04
HRD1YOL013C IRC23Q08416 157 aa2.28□□□□□ -2.04
HRD1YOL013C YOL162WP0CF19 215 aa2.28□□□□□ -2.05
HRD1YOL013C TVP23P38962 199 aa2.28□□□□□ -2.05
HRD1YOL013C YER135CP40082 130 aa2.28□□□□□ -2.05
HRD1YOL013C RIO2P40160 425 aaKnown RBP2.28□□□□□ -2.05
HRD1YOL013C YNR064CP53750 290 aa2.28□□□□□ -2.05
HRD1YOL013C TVP18Q04767 167 aa2.28□□□□□ -2.05
HRD1YOL013C YOR381W-AQ3E804 55 aa2.28□□□□□ -2.05
HRD1YOL013C YLR422WQ06409 1932 aa2.27□□□□□ -2.05
HRD1YOL013C YER039C-AP0CD97 72 aa2.27□□□□□ -2.05
HRD1YOL013C ETR1P38071 380 aa2.27□□□□□ -2.05
HRD1YOL013C RGI1P40043 161 aaPredicted RBP2.27□□□□□ -2.05
HRD1YOL013C YNL217WP40152 326 aa2.27□□□□□ -2.05
HRD1YOL013C YIL059CP40520 121 aa2.27□□□□□ -2.05
HRD1YOL013C GAT4P40569 121 aa2.27□□□□□ -2.05
HRD1YOL013C YJR146WP47174 117 aa2.27□□□□□ -2.05
HRD1YOL013C GEP7P53171 287 aa2.27□□□□□ -2.05
HRD1YOL013C YGR017WP53210 297 aa2.27□□□□□ -2.05
HRD1YOL013C AIM11P87275 137 aa2.27□□□□□ -2.05
HRD1YOL013C LIP1Q03579 150 aa2.27□□□□□ -2.05
HRD1YOL013C FEX1Q08913 375 aa2.27□□□□□ -2.05
HRD1YOL013C FEX2Q08991 375 aa2.27□□□□□ -2.05
HRD1YOL013C TOM1Q03280 3268 aa2.26□□□□□ -2.05
HRD1YOL013C YET1P35723 206 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms