RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W PAA1Q12447 191 aaKnown RBP3.07□□□□□ -1.92
USA1YML029W PCC1Q3E833 88 aa3.07□□□□□ -1.92
USA1YML029W YMR316C-AI2HB70 103 aa3.06□□□□□ -1.92
USA1YML029W DDI2P0CH63 225 aa3.06□□□□□ -1.92
USA1YML029W DDI3P0CH64 225 aa3.06□□□□□ -1.92
USA1YML029W CMC1P36064 111 aa3.06□□□□□ -1.92
USA1YML029W SDH4P37298 181 aa3.06□□□□□ -1.92
USA1YML029W AVT5P38176 459 aa3.06□□□□□ -1.92
USA1YML029W POP7P38291 140 aa3.06□□□□□ -1.92
USA1YML029W DER1P38307 211 aa3.06□□□□□ -1.92
USA1YML029W WWM1P43582 211 aaKnown RBP3.06□□□□□ -1.92
USA1YML029W RPA43P46669 326 aa3.06□□□□□ -1.92
USA1YML029W LST7P53237 242 aa3.06□□□□□ -1.92
USA1YML029W MRX11Q03079 207 aa3.06□□□□□ -1.92
USA1YML029W YMR253CQ04835 414 aa3.06□□□□□ -1.92
USA1YML029W PAU1P0CE88 120 aa3.05□□□□□ -1.92
USA1YML029W PAU14P0CE89 120 aa3.05□□□□□ -1.92
USA1YML029W PAU6P0CE90 120 aa3.05□□□□□ -1.92
USA1YML029W PAU18P0CE91 120 aa3.05□□□□□ -1.92
USA1YML029W PAU8P0CE92 120 aa3.05□□□□□ -1.92
USA1YML029W PAU11P0CE93 120 aa3.05□□□□□ -1.92
USA1YML029W YCR022CP25620 114 aa3.05□□□□□ -1.92
USA1YML029W PAU13P38725 120 aa3.05□□□□□ -1.92
USA1YML029W POG1P40473 351 aa3.05□□□□□ -1.92
USA1YML029W TOS8P53147 276 aa3.05□□□□□ -1.92
USA1YML029W PAU10Q03050 120 aa3.05□□□□□ -1.92
USA1YML029W ATC1Q04005 294 aa3.05□□□□□ -1.92
USA1YML029W PBP4Q07362 185 aaKnown RBP3.05□□□□□ -1.92
USA1YML029W PAU20Q08322 120 aa3.05□□□□□ -1.92
USA1YML029W WIP1Q2V2P8 89 aa3.05□□□□□ -1.92
USA1YML029W PAU9Q3E770 120 aa3.05□□□□□ -1.92
USA1YML029W RPS8AP0CX39 200 aaKnown RBP3.05□□□□□ -1.92
USA1YML029W RPS8BP0CX40 200 aaKnown RBP3.05□□□□□ -1.92
USA1YML029W MRPL20P22354 195 aaPredicted RBP3.05□□□□□ -1.92
USA1YML029W MPC2P38857 129 aa3.05□□□□□ -1.92
USA1YML029W YGL185CP53100 379 aa3.05□□□□□ -1.92
USA1YML029W CPD1P53314 239 aa3.05□□□□□ -1.92
USA1YML029W SNO1Q03144 224 aa3.05□□□□□ -1.92
USA1YML029W YML122CQ03207 126 aa3.05□□□□□ -1.92
USA1YML029W GTO3Q04806 366 aa3.05□□□□□ -1.92
USA1YML029W RXT3Q07458 294 aa3.05□□□□□ -1.92
USA1YML029W IZH3Q07959 543 aa3.05□□□□□ -1.92
USA1YML029W ATX2Q12067 313 aa3.05□□□□□ -1.92
USA1YML029W UTP23Q12339 254 aaKnown RBP3.05□□□□□ -1.92
USA1YML029W YCL001W-BQ96VH2 84 aa3.05□□□□□ -1.92
USA1YML029W MRP2P10663 115 aaPredicted RBP3.04□□□□□ -1.92
USA1YML029W SEC59P20048 519 aa3.04□□□□□ -1.92
USA1YML029W YPS1P32329 569 aa3.04□□□□□ -1.92
USA1YML029W ELF1P36053 145 aa3.04□□□□□ -1.92
USA1YML029W CYB5P40312 120 aa3.04□□□□□ -1.92
USA1YML029W HST4P53688 370 aa3.04□□□□□ -1.92
USA1YML029W MHR1Q06630 226 aa3.04□□□□□ -1.92
USA1YML029W IRC23Q08416 157 aa3.04□□□□□ -1.92
USA1YML029W ERV2Q12284 196 aa3.04□□□□□ -1.92
USA1YML029W YPR145C-AQ2V2P0 78 aa3.04□□□□□ -1.92
USA1YML029W RPS22AP0C0W1 130 aaKnown RBP3.04□□□□□ -1.92
USA1YML029W HSP12P22943 109 aaKnown RBP3.04□□□□□ -1.92
USA1YML029W YCR041WP37265 110 aa3.04□□□□□ -1.92
USA1YML029W PHS1P40857 217 aa3.04□□□□□ -1.92
USA1YML029W ATG27P46989 271 aa3.04□□□□□ -1.92
USA1YML029W OCA2P53949 197 aa3.04□□□□□ -1.92
USA1YML029W GEP3Q08622 556 aa3.04□□□□□ -1.92
USA1YML029W YPR063CQ12160 140 aa3.04□□□□□ -1.92
USA1YML029W LAS17Q12446 633 aa3.04□□□□□ -1.92
USA1YML029W CDC7P06243 507 aa3.03□□□□□ -1.92
USA1YML029W YKL070WP36087 169 aa3.03□□□□□ -1.92
USA1YML029W PHD1P36093 366 aa3.03□□□□□ -1.92
USA1YML029W SFT2P38166 215 aa3.03□□□□□ -1.92
USA1YML029W TRS20P38334 175 aa3.03□□□□□ -1.92
USA1YML029W DSK2P48510 373 aa3.03□□□□□ -1.92
USA1YML029W ATG39Q06159 398 aa3.03□□□□□ -1.92
USA1YML029W YHR213WP0CI67 198 aa3.03□□□□□ -1.92
USA1YML029W RPS2P25443 254 aaKnown RBP3.03□□□□□ -1.92
USA1YML029W SUR2P38992 349 aa3.03□□□□□ -1.92
USA1YML029W FIP1P45976 327 aa3.03□□□□□ -1.92
USA1YML029W YJL027CP47063 138 aaPredicted RBP3.03□□□□□ -1.92
USA1YML029W BNS1P50084 137 aa3.03□□□□□ -1.92
USA1YML029W CYC7P00045 113 aa3.02□□□□□ -1.93
USA1YML029W MRS1P07266 363 aa3.02□□□□□ -1.93
USA1YML029W YHR212W-AP0CX91 67 aa3.02□□□□□ -1.93
USA1YML029W RNA15P25299 296 aaPredicted RBP3.02□□□□□ -1.93
USA1YML029W LAC1P28496 418 aa3.02□□□□□ -1.93
USA1YML029W IMD2P38697 523 aaKnown RBP3.02□□□□□ -1.93
USA1YML029W IMP2P46972 177 aa3.02□□□□□ -1.93
USA1YML029W HHO1P53551 258 aa3.02□□□□□ -1.93
USA1YML029W UBC7Q02159 165 aa3.02□□□□□ -1.93
USA1YML029W RRG8Q06109 277 aa3.02□□□□□ -1.93
USA1YML029W LOA1Q06508 300 aa3.02□□□□□ -1.93
USA1YML029W CSM4Q08955 156 aa3.02□□□□□ -1.93
USA1YML029W HTB2P02294 131 aa3.02□□□□□ -1.93
USA1YML029W ADH3P07246 375 aaKnown RBP3.02□□□□□ -1.93
USA1YML029W COQ3P27680 312 aa3.02□□□□□ -1.93
USA1YML029W MRPL4P36517 319 aa3.02□□□□□ -1.93
USA1YML029W MRPS9P38120 278 aa3.02□□□□□ -1.93
USA1YML029W AME1P38313 324 aa3.02□□□□□ -1.93
USA1YML029W PGD1P40356 397 aa3.02□□□□□ -1.93
USA1YML029W TDA4P47153 279 aa3.02□□□□□ -1.93
USA1YML029W AYT1Q12226 474 aa3.02□□□□□ -1.93
USA1YML029W YDR215CQ12240 137 aa3.02□□□□□ -1.93
USA1YML029W YNL146C-AQ3E7Z1 64 aa3.02□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms