RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W MRPL24P36525 258 aaPredicted RBP0.52□□□□□ -2.33
PRP16YKR086W TRM7P38238 310 aaKnown RBP0.52□□□□□ -2.33
PRP16YKR086W YER189WP40104 122 aa0.52□□□□□ -2.33
PRP16YKR086W AYR1P40471 297 aa0.52□□□□□ -2.33
PRP16YKR086W ICE2P40499 491 aa0.52□□□□□ -2.33
PRP16YKR086W DID2P69771 204 aa0.52□□□□□ -2.33
PRP16YKR086W SWP1Q02795 286 aa0.52□□□□□ -2.33
PRP16YKR086W VPS71Q03433 280 aa0.52□□□□□ -2.33
PRP16YKR086W LIP1Q03579 150 aa0.52□□□□□ -2.33
PRP16YKR086W TVP15Q03860 143 aa0.52□□□□□ -2.33
PRP16YKR086W GIM5Q04493 163 aa0.52□□□□□ -2.33
PRP16YKR086W MEU1Q07938 337 aaKnown RBP RIP-Chip data0.52□□□□□ -2.33not detected
PRP16YKR086W PRM4Q12498 284 aa0.52□□□□□ -2.33
PRP16YKR086W YRA2P36036 203 aaKnown RBP RIP-Chip data0.51□□□□□ -2.33not detected
PRP16YKR086W YER076CP40049 302 aa0.51□□□□□ -2.33
PRP16YKR086W YFR045WP43617 309 aa0.51□□□□□ -2.33
PRP16YKR086W NBP35P52920 328 aa0.51□□□□□ -2.33
PRP16YKR086W YPL039WQ03080 316 aa0.51□□□□□ -2.33
PRP16YKR086W FMN1Q03778 218 aa0.51□□□□□ -2.33
PRP16YKR086W CUE4Q04201 117 aaPredicted RBP0.51□□□□□ -2.33
PRP16YKR086W LPP1Q04396 274 aa0.51□□□□□ -2.33
PRP16YKR086W FCF1Q05498 189 aaPredicted RBP0.51□□□□□ -2.33
PRP16YKR086W ARR2Q06597 130 aa0.51□□□□□ -2.33
PRP16YKR086W RIO1Q12196 484 aaKnown RBP0.51□□□□□ -2.33
PRP16YKR086W YKL183C-AQ3E765 70 aa0.51□□□□□ -2.33
PRP16YKR086W YKL068W-AQ3E826 78 aa0.51□□□□□ -2.33
PRP16YKR086W MRS1P07266 363 aa0.51□□□□□ -2.33
PRP16YKR086W YLR156WP0CE96 114 aa0.51□□□□□ -2.33
PRP16YKR086W YLR159WP0CE97 114 aa0.51□□□□□ -2.33
PRP16YKR086W YLR161WP0CE98 114 aa0.51□□□□□ -2.33
PRP16YKR086W YOL163WP0CF20 169 aa0.51□□□□□ -2.33
PRP16YKR086W PHO80P20052 293 aa0.51□□□□□ -2.33
PRP16YKR086W MRPL11P36521 249 aaPredicted RBP0.51□□□□□ -2.33
PRP16YKR086W YNL217WP40152 326 aa0.51□□□□□ -2.33
PRP16YKR086W YIL102CP40488 101 aa0.51□□□□□ -2.33
PRP16YKR086W YGR201CP42936 225 aa0.51□□□□□ -2.33
PRP16YKR086W YAR1P46683 200 aa0.51□□□□□ -2.33
PRP16YKR086W CAB4P53332 305 aa0.51□□□□□ -2.33
PRP16YKR086W POP3P53833 195 aaPredicted RBP0.51□□□□□ -2.33
PRP16YKR086W AAH1P53909 347 aa0.51□□□□□ -2.33
PRP16YKR086W AIM36Q03798 255 aa0.51□□□□□ -2.33
PRP16YKR086W FYV12Q08559 129 aa0.51□□□□□ -2.33
PRP16YKR086W YPR202WQ08993 238 aa0.51□□□□□ -2.33
PRP16YKR086W TRM10Q12400 293 aa0.51□□□□□ -2.33
PRP16YKR086W VAR1P02381 398 aa0.51□□□□□ -2.33
PRP16YKR086W HAP3P13434 144 aa0.51□□□□□ -2.33
PRP16YKR086W ARO7P32178 256 aa0.51□□□□□ -2.33
PRP16YKR086W GPX1P36014 167 aa0.51□□□□□ -2.33
PRP16YKR086W YBR285WP38354 144 aa0.51□□□□□ -2.33
PRP16YKR086W HTD2P38790 280 aaKnown RBP0.51□□□□□ -2.33
PRP16YKR086W EGD2P38879 174 aaKnown RBP0.51□□□□□ -2.33
PRP16YKR086W YAR064WP39563 99 aa0.51□□□□□ -2.33
PRP16YKR086W GVP36P40531 326 aaKnown RBP0.51□□□□□ -2.33
PRP16YKR086W MSS2P40990 351 aa0.51□□□□□ -2.33
PRP16YKR086W OTU1P43558 301 aa0.51□□□□□ -2.33
PRP16YKR086W ORM1P53224 222 aa0.51□□□□□ -2.33
PRP16YKR086W YKR005CQ02203 525 aa0.51□□□□□ -2.33
PRP16YKR086W YDL180WQ12301 547 aa0.51□□□□□ -2.33
PRP16YKR086W YAL063C-AQ3E791 96 aa0.51□□□□□ -2.33
PRP16YKR086W YNL277W-AQ3E7Z0 62 aa0.51□□□□□ -2.33
PRP16YKR086W URA2P07259 2214 aaKnown RBP0.5□□□□□ -2.33
PRP16YKR086W CCW14O13547 238 aa0.5□□□□□ -2.33
PRP16YKR086W HIS3P06633 220 aa0.5□□□□□ -2.33
PRP16YKR086W AME1P38313 324 aa0.5□□□□□ -2.33
PRP16YKR086W NOP19P53317 196 aaPredicted RBP0.5□□□□□ -2.33
PRP16YKR086W YIL014C-AQ02598 104 aa0.5□□□□□ -2.33
PRP16YKR086W MZM1Q03429 123 aaPredicted RBP0.5□□□□□ -2.33
PRP16YKR086W SPG3Q04398 127 aaPredicted RBP0.5□□□□□ -2.33
PRP16YKR086W SME1Q12330 94 aaPredicted RBP0.5□□□□□ -2.33
PRP16YKR086W NOT5Q12514 560 aaPredicted RBP0.5□□□□□ -2.33
PRP16YKR086W YHR086W-AQ3E746 53 aa0.5□□□□□ -2.33
PRP16YKR086W YOL162WP0CF19 215 aa0.5□□□□□ -2.33
PRP16YKR086W STF2P16965 84 aa0.5□□□□□ -2.33
PRP16YKR086W MRPL44P19956 98 aa0.5□□□□□ -2.33
PRP16YKR086W PRE7P23724 241 aaKnown RBP0.5□□□□□ -2.33
PRP16YKR086W TFC1P32367 649 aa0.5□□□□□ -2.33
PRP16YKR086W YOR062CP36025 268 aa0.5□□□□□ -2.33
PRP16YKR086W ETR1P38071 380 aa0.5□□□□□ -2.33
PRP16YKR086W NSG1P38837 291 aa0.5□□□□□ -2.33
PRP16YKR086W CYC2P38909 366 aa0.5□□□□□ -2.33
PRP16YKR086W MRPL49P40858 161 aaPredicted RBP0.5□□□□□ -2.33
PRP16YKR086W RPS29BP41058 56 aaKnown RBP0.5□□□□□ -2.33
PRP16YKR086W YAE1P47118 141 aaPredicted RBP0.5□□□□□ -2.33
PRP16YKR086W OST3P48439 350 aa0.5□□□□□ -2.33
PRP16YKR086W IRC21Q04772 201 aa0.5□□□□□ -2.33
PRP16YKR086W DYN3Q04949 312 aa0.5□□□□□ -2.33
PRP16YKR086W ABP140Q08641 628 aaKnown RBP0.5□□□□□ -2.33
PRP16YKR086W SPC3Q12133 184 aa0.5□□□□□ -2.33
PRP16YKR086W YOR214CQ12282 236 aa0.5□□□□□ -2.33
PRP16YKR086W PEX4P29340 183 aa0.49□□□□□ -2.33
PRP16YKR086W SEC17P32602 292 aa0.49□□□□□ -2.33
PRP16YKR086W CLB6P32943 380 aa0.49□□□□□ -2.33
PRP16YKR086W YBR209WP38311 105 aa0.49□□□□□ -2.33
PRP16YKR086W ERV15P38312 142 aa0.49□□□□□ -2.33
PRP16YKR086W YEL067CP39978 195 aa0.49□□□□□ -2.33
PRP16YKR086W YPL073CP40323 161 aa0.49□□□□□ -2.33
PRP16YKR086W SYS1P41544 203 aa0.49□□□□□ -2.33
PRP16YKR086W YML079WQ03629 201 aa0.49□□□□□ -2.33
PRP16YKR086W PKR1Q03880 122 aaKnown RBP0.49□□□□□ -2.33
PRP16YKR086W SHH3Q04487 196 aa0.49□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 998.7 ms