RNA–Protein interactions for RNA: YKR017C

HEL1, Transcript of RING finger ubiquitin ligase (E3), yeastyeast

Gene HEL1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HEL1YKR017C YML053CQ04978 212 aa5.86□□□□□ -1.47
HEL1YKR017C YDL180WQ12301 547 aa5.86□□□□□ -1.47
HEL1YKR017C YER181CP40097 107 aa5.85□□□□□ -1.47
HEL1YKR017C YLR281CQ05863 155 aa5.85□□□□□ -1.47
HEL1YKR017C YDR119W-AQ2V2P9 66 aa5.85□□□□□ -1.47
HEL1YKR017C BUD3P25558 1636 aa5.85□□□□□ -1.47
HEL1YKR017C MRS4P23500 304 aa5.85□□□□□ -1.47
HEL1YKR017C CNE1P27825 502 aa5.85□□□□□ -1.47
HEL1YKR017C APS1P35181 156 aa5.85□□□□□ -1.47
HEL1YKR017C YRA2P36036 203 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
HEL1YKR017C SMP1P38128 452 aa5.85□□□□□ -1.47
HEL1YKR017C PHO88P38264 188 aaPredicted RBP5.85□□□□□ -1.47
HEL1YKR017C YHL018WP38744 120 aaPredicted RBP5.85□□□□□ -1.47
HEL1YKR017C YND1P40009 630 aa5.85□□□□□ -1.47
HEL1YKR017C SDS23P53172 527 aa5.85□□□□□ -1.47
HEL1YKR017C SUN4P53616 420 aa5.85□□□□□ -1.47
HEL1YKR017C MCH4Q08268 501 aa5.85□□□□□ -1.47
HEL1YKR017C TSC3Q3E790 80 aa5.85□□□□□ -1.47
HEL1YKR017C YRF1-1P0CX20 1796 aa5.85□□□□□ -1.47
HEL1YKR017C YRF1-5P0CX21 1796 aa5.85□□□□□ -1.47
HEL1YKR017C YRF1-8P0CX22 1796 aa5.85□□□□□ -1.47
HEL1YKR017C HEM2P05373 342 aa5.84□□□□□ -1.47
HEL1YKR017C CTF8P38877 133 aa5.84□□□□□ -1.47
HEL1YKR017C PHS1P40857 217 aa5.84□□□□□ -1.47
HEL1YKR017C TDA4P47153 279 aa5.84□□□□□ -1.47
HEL1YKR017C BNS1P50084 137 aa5.84□□□□□ -1.47
HEL1YKR017C EST3Q03096 181 aa5.84□□□□□ -1.47
HEL1YKR017C YOL160WQ08321 113 aa5.84□□□□□ -1.47
HEL1YKR017C MSA1Q08471 629 aa5.84□□□□□ -1.47
HEL1YKR017C DAD1Q12248 94 aa5.84□□□□□ -1.47
HEL1YKR017C DFM1Q12743 341 aaKnown RBP5.84□□□□□ -1.47
HEL1YKR017C MYO1P08964 1928 aa5.84□□□□□ -1.47
HEL1YKR017C YOL162WP0CF19 215 aa5.83□□□□□ -1.48
HEL1YKR017C RPL40AP0CH08 128 aaKnown RBP5.83□□□□□ -1.48
HEL1YKR017C RPL40BP0CH09 128 aaKnown RBP5.83□□□□□ -1.48
HEL1YKR017C MAK32P23060 363 aa5.83□□□□□ -1.48
HEL1YKR017C PEX17P40155 199 aa5.83□□□□□ -1.48
HEL1YKR017C YML079WQ03629 201 aa5.83□□□□□ -1.48
HEL1YKR017C IRC25Q07951 179 aa5.83□□□□□ -1.48
HEL1YKR017C HTA1P04911 132 aaKnown RBP5.82□□□□□ -1.48
HEL1YKR017C MSB2P32334 1306 aa5.82□□□□□ -1.48
HEL1YKR017C RPB7P34087 171 aa5.82□□□□□ -1.48
HEL1YKR017C NRG2P38082 220 aa5.82□□□□□ -1.48
HEL1YKR017C SVP26P38869 228 aa5.82□□□□□ -1.48
HEL1YKR017C YNL234WP53857 426 aa5.82□□□□□ -1.48
HEL1YKR017C NCE102Q12207 173 aaRIP-Chip data5.82□□□□□ -1.48not detected
HEL1YKR017C ARF1P11076 181 aaKnown RBP5.82□□□□□ -1.48
HEL1YKR017C SPT4P32914 102 aaPredicted RBP5.82□□□□□ -1.48
HEL1YKR017C GPI18P38211 433 aa5.82□□□□□ -1.48
HEL1YKR017C UBC4P15731 148 aa5.81□□□□□ -1.48
HEL1YKR017C RPL16BP26785 198 aaKnown RBP5.81□□□□□ -1.48
HEL1YKR017C AHT1P29589 182 aa5.81□□□□□ -1.48
HEL1YKR017C TOM6P33448 61 aa5.81□□□□□ -1.48
HEL1YKR017C YBR292CP38357 123 aa5.81□□□□□ -1.48
HEL1YKR017C YIL165CP40446 119 aa5.81□□□□□ -1.48
HEL1YKR017C YPS5P53057 165 aa5.81□□□□□ -1.48
HEL1YKR017C SWS2P53937 143 aa5.81□□□□□ -1.48
HEL1YKR017C HTL1Q9URQ5 78 aa5.81□□□□□ -1.48
HEL1YKR017C ECM29P38737 1868 aa5.81□□□□□ -1.48
HEL1YKR017C ECM34P38728 170 aa5.8□□□□□ -1.48
HEL1YKR017C SMD1Q02260 146 aaPredicted RBP5.8□□□□□ -1.48
HEL1YKR017C SPG4Q04438 115 aa5.8□□□□□ -1.48
HEL1YKR017C ASM4Q05166 528 aa5.8□□□□□ -1.48
HEL1YKR017C MOT1P32333 1867 aa5.8□□□□□ -1.48
HEL1YKR017C Q0255P03881 472 aa5.79□□□□□ -1.48
HEL1YKR017C YCR099CP25657 155 aa5.79□□□□□ -1.48
HEL1YKR017C PUB1P32588 453 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48 RIP-Chip
HEL1YKR017C CSE2P33308 149 aa5.79□□□□□ -1.48
HEL1YKR017C RIM2P38127 377 aa5.79□□□□□ -1.48
HEL1YKR017C MIC27P50945 234 aa5.79□□□□□ -1.48
HEL1YKR017C YGL034CP53186 121 aa5.79□□□□□ -1.48
HEL1YKR017C YFL041W-AQ3E817 63 aa5.79□□□□□ -1.48
HEL1YKR017C URA5P13298 226 aaKnown RBP5.79□□□□□ -1.48
HEL1YKR017C NHP2P32495 156 aaPredicted RBP5.79□□□□□ -1.48
HEL1YKR017C AHP1P38013 176 aaKnown RBP5.79□□□□□ -1.48
HEL1YKR017C UMP1P38293 148 aa5.79□□□□□ -1.48
HEL1YKR017C PEP8P40335 379 aa5.79□□□□□ -1.48
HEL1YKR017C UBC13P52490 153 aa5.79□□□□□ -1.48
HEL1YKR017C YGL262WP53054 175 aa5.79□□□□□ -1.48
HEL1YKR017C YNL046WP53956 172 aa5.79□□□□□ -1.48
HEL1YKR017C YOL159CQ08300 171 aa5.79□□□□□ -1.48
HEL1YKR017C ATG41Q12048 136 aa5.79□□□□□ -1.48
HEL1YKR017C COX19Q3E731 98 aa5.79□□□□□ -1.48
HEL1YKR017C FKS3Q04952 1785 aa5.78□□□□□ -1.48
HEL1YKR017C YBR255C-AQ3E776 120 aa5.78□□□□□ -1.48
HEL1YKR017C YAL063C-AQ3E791 96 aa5.78□□□□□ -1.48
HEL1YKR017C RPL32P38061 130 aaKnown RBP5.77□□□□□ -1.49
HEL1YKR017C CUZ1P53899 274 aa5.77□□□□□ -1.49
HEL1YKR017C YHR214C-EQ8TGK0 99 aa5.77□□□□□ -1.49
HEL1YKR017C YCL021W-AQ96VH3 125 aa5.77□□□□□ -1.49
HEL1YKR017C RIM15P43565 1770 aa5.77□□□□□ -1.49
HEL1YKR017C FYV4P38783 130 aaPredicted RBP5.76□□□□□ -1.49
HEL1YKR017C YGL088WP53151 121 aa5.76□□□□□ -1.49
HEL1YKR017C POP3P53833 195 aaPredicted RBP5.76□□□□□ -1.49
HEL1YKR017C SLH1P53327 1967 aaKnown RBP5.76□□□□□ -1.49
HEL1YKR017C GGC1P38988 300 aa5.75□□□□□ -1.49
HEL1YKR017C KEG1P43614 200 aa5.75□□□□□ -1.49
HEL1YKR017C YLR012CQ07927 99 aa5.75□□□□□ -1.49
HEL1YKR017C YOR376W-AQ3E805 51 aa5.75□□□□□ -1.49
HEL1YKR017C MIC10Q96VH5 97 aa5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms