RNA–Protein interactions for RNA: YKL137W

CMC1, Transcript of Copper-binding protein of the mitochondrial intermembrane space, yeast

Gene CMC1, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMC1	YKL137W	YDR476C	Q03362	224 aa		0.49	□□□□□ -2.33
CMC1	YKL137W	MAK3	Q03503	176 aa		0.49	□□□□□ -2.33
CMC1	YKL137W	SEN15	Q04675	128 aa		0.49	□□□□□ -2.33
CMC1	YKL137W	IRC21	Q04772	201 aa		0.49	□□□□□ -2.33
CMC1	YKL137W	YLR307C-A	Q3E825	87 aa		0.49	□□□□□ -2.33
CMC1	YKL137W	VPS51	P36116	164 aa		0.48	□□□□□ -2.33
CMC1	YKL137W	FES1	P38260	290 aa		0.48	□□□□□ -2.33
CMC1	YKL137W	LSM3	P57743	89 aa	Known RBP	0.48	□□□□□ -2.33
CMC1	YKL137W	MRS4	P23500	304 aa		0.47	□□□□□ -2.33
CMC1	YKL137W	YHR140W	P38842	239 aa		0.47	□□□□□ -2.33
CMC1	YKL137W	DLS1	P40366	167 aa		0.47	□□□□□ -2.33
CMC1	YKL137W	ORM1	P53224	222 aa		0.47	□□□□□ -2.33
CMC1	YKL137W	ATP19	P81451	68 aa		0.47	□□□□□ -2.33
CMC1	YKL137W	GPI11	Q06636	219 aa		0.47	□□□□□ -2.33
CMC1	YKL137W	IRC19	Q07843	230 aa		0.47	□□□□□ -2.33
CMC1	YKL137W	UBI4	P0CG63	381 aa	Known RBP	0.46	□□□□□ -2.34
CMC1	YKL137W	YGL193C	P53097	103 aa		0.46	□□□□□ -2.34
CMC1	YKL137W	YPD1	Q07688	167 aa		0.46	□□□□□ -2.34
CMC1	YKL137W	YLR053C	Q12026	108 aa		0.46	□□□□□ -2.34
CMC1	YKL137W	RDI1	Q12434	202 aa		0.46	□□□□□ -2.34
CMC1	YKL137W	SRP21	P32342	167 aa		0.45	□□□□□ -2.34
CMC1	YKL137W	YPR153W	Q06537	140 aa		0.45	□□□□□ -2.34
CMC1	YKL137W	RFU1	Q08003	200 aa		0.45	□□□□□ -2.34
CMC1	YKL137W	SRL3	P36167	246 aa		0.44	□□□□□ -2.34
CMC1	YKL137W	RIF1	P29539	1916 aa		0.43	□□□□□ -2.34
CMC1	YKL137W	RPL30	P14120	105 aa	Known RBP	0.43	□□□□□ -2.34
CMC1	YKL137W	GPI2	P46961	280 aa		0.43	□□□□□ -2.34
CMC1	YKL137W	VMA10	P48836	114 aa	Known RBP	0.43	□□□□□ -2.34
CMC1	YKL137W	GIM5	Q04493	163 aa		0.43	□□□□□ -2.34
CMC1	YKL137W	RRT7	Q07829	113 aa		0.43	□□□□□ -2.34
CMC1	YKL137W	HSL1	P34244	1518 aa		0.43	□□□□□ -2.34
CMC1	YKL137W	YLR157W-E	P0CF00	54 aa		0.42	□□□□□ -2.34
CMC1	YKL137W	NHP6A	P11632	93 aa	Known RBP	0.42	□□□□□ -2.34
CMC1	YKL137W	EST3	Q03096	181 aa		0.41	□□□□□ -2.34
CMC1	YKL137W	COA6	Q3E846	104 aa		0.41	□□□□□ -2.34
CMC1	YKL137W	PEX34	P25584	144 aa		0.4	□□□□□ -2.35
CMC1	YKL137W	APQ12	P40532	138 aa		0.4	□□□□□ -2.35
CMC1	YKL137W	FIP1	P45976	327 aa		0.4	□□□□□ -2.35
CMC1	YKL137W	DIE2	P50076	525 aa		0.4	□□□□□ -2.35
CMC1	YKL137W	PBI2	P0CT04	75 aa	Known RBP	0.39	□□□□□ -2.35
CMC1	YKL137W	MVB12	P42939	101 aa		0.39	□□□□□ -2.35
CMC1	YKL137W	MHF1	Q3E835	90 aa		0.39	□□□□□ -2.35
CMC1	YKL137W	YER121W	P40076	114 aa		0.38	□□□□□ -2.35
CMC1	YKL137W	YGL014C-A	P0C5N1	53 aa		0.37	□□□□□ -2.35
CMC1	YKL137W	YER181C	P40097	107 aa		0.37	□□□□□ -2.35
CMC1	YKL137W	HUT1	Q12520	339 aa		0.37	□□□□□ -2.35
CMC1	YKL137W	SCS22	Q6Q595	175 aa		0.37	□□□□□ -2.35
CMC1	YKL137W	YPR202W	Q08993	238 aa		0.36	□□□□□ -2.35
CMC1	YKL137W	YOR034C-A	Q3E735	80 aa		0.36	□□□□□ -2.35
CMC1	YKL137W	PHO13	P19881	312 aa		0.35	□□□□□ -2.35
CMC1	YKL137W	YMR122C	Q03879	124 aa		0.35	□□□□□ -2.35
CMC1	YKL137W	YMR321C	Q04898	105 aa		0.35	□□□□□ -2.35
CMC1	YKL137W	KTI11	Q3E840	82 aa		0.35	□□□□□ -2.35
CMC1	YKL137W	MRPL24	P36525	258 aa	Predicted RBP	0.34	□□□□□ -2.36
CMC1	YKL137W	CMC2	Q3E7A4	109 aa		0.34	□□□□□ -2.36
CMC1	YKL137W	QCR2	P07257	368 aa		0.33	□□□□□ -2.36
CMC1	YKL137W	HUG1	Q6Q5K6	68 aa		0.33	□□□□□ -2.36
CMC1	YKL137W	DDR48	P18899	430 aa	Known RBP	0.32	□□□□□ -2.36
CMC1	YKL137W	BUB2	P26448	306 aa	Predicted RBP	0.32	□□□□□ -2.36
CMC1	YKL137W	YNL019C	P53975	284 aa		0.32	□□□□□ -2.36
CMC1	YKL137W	SLM6	P38343	150 aa		0.31	□□□□□ -2.36
CMC1	YKL137W	YJL218W	P40892	196 aa	Known RBP	0.31	□□□□□ -2.36
CMC1	YKL137W	RPS28B	P0C0X0	67 aa	Known RBP	0.3	□□□□□ -2.36
CMC1	YKL137W	FUN14	P18411	198 aa		0.3	□□□□□ -2.36
CMC1	YKL137W	LST8	P41318	303 aa		0.3	□□□□□ -2.36
CMC1	YKL137W	EFG1	Q3E705	233 aa	Known RBP	0.3	□□□□□ -2.36
CMC1	YKL137W	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.3	□□□□□ -2.36
CMC1	YKL137W	COX5B	P00425	151 aa		0.29	□□□□□ -2.36
CMC1	YKL137W	IPI1	P38803	334 aa	Predicted RBP	0.29	□□□□□ -2.36
CMC1	YKL137W	FIT3	Q08907	204 aa		0.29	□□□□□ -2.36
CMC1	YKL137W	NSL1	Q12143	216 aa		0.28	□□□□□ -2.36
CMC1	YKL137W	SAC3	P46674	1301 aa		0.28	□□□□□ -2.36
CMC1	YKL137W	ANB1	P19211	157 aa		0.27	□□□□□ -2.37
CMC1	YKL137W	YCL001W-A	P87012	153 aa		0.27	□□□□□ -2.37
CMC1	YKL137W	COA4	Q05809	96 aa		0.27	□□□□□ -2.37
CMC1	YKL137W	YHR213W	P0CI67	198 aa		0.25	□□□□□ -2.37
CMC1	YKL137W	HSP12	P22943	109 aa	Known RBP	0.25	□□□□□ -2.37
CMC1	YKL137W	FYV5	P25585	152 aa		0.25	□□□□□ -2.37
CMC1	YKL137W	AME1	P38313	324 aa		0.25	□□□□□ -2.37
CMC1	YKL137W	EMC4	P53073	190 aa		0.25	□□□□□ -2.37
CMC1	YKL137W	CDC39	P25655	2108 aa	Known RBP	0.25	□□□□□ -2.37
CMC1	YKL137W	NMT1	P14743	455 aa		0.24	□□□□□ -2.37
CMC1	YKL137W	RPS1B	P23248	255 aa	Known RBP	0.23	□□□□□ -2.37
CMC1	YKL137W	DER1	P38307	211 aa		0.23	□□□□□ -2.37
CMC1	YKL137W	NAT5	Q08689	176 aa		0.23	□□□□□ -2.37
CMC1	YKL137W	RAF1	Q06891	181 aa		0.22	□□□□□ -2.37
CMC1	YKL137W	PHB1	P40961	287 aa		0.21	□□□□□ -2.38
CMC1	YKL137W	CHD1	P32657	1468 aa		0.21	□□□□□ -2.38
CMC1	YKL137W	PFY1	P07274	126 aa		0.2	□□□□□ -2.38
CMC1	YKL137W	YBR013C	P38215	129 aa		0.2	□□□□□ -2.38
CMC1	YKL137W	RPS29B	P41058	56 aa	Known RBP	0.2	□□□□□ -2.38
CMC1	YKL137W	SOM1	Q05676	74 aa		0.2	□□□□□ -2.38
CMC1	YKL137W	UTP11	P34247	250 aa	Predicted RBP	0.19	□□□□□ -2.38
CMC1	YKL137W	MIC27	P50945	234 aa		0.19	□□□□□ -2.38
CMC1	YKL137W	SFT2	P38166	215 aa		0.18	□□□□□ -2.38
CMC1	YKL137W	DDP1	Q99321	188 aa	Known RBP	0.18	□□□□□ -2.38
CMC1	YKL137W	RPL40A	P0CH08	128 aa	Known RBP	0.17	□□□□□ -2.38
CMC1	YKL137W	RPL40B	P0CH09	128 aa	Known RBP	0.17	□□□□□ -2.38
CMC1	YKL137W	LSM8	P47093	109 aa	Known RBP	0.17	□□□□□ -2.38
CMC1	YKL137W	YPL067C	Q02754	198 aa		0.17	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 41.8 ms