RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C HSK3P69852 69 aa-0.07□□□□□ -2.42
SNU56YDR240C NMA1Q06178 401 aaKnown RBP-0.07□□□□□ -2.42
SNU56YDR240C PEX11Q12462 236 aa-0.07□□□□□ -2.42
SNU56YDR240C IPI1P38803 334 aaPredicted RBP-0.08□□□□□ -2.42
SNU56YDR240C YIP3P53633 176 aa-0.08□□□□□ -2.42
SNU56YDR240C YDR102CQ03864 110 aa-0.08□□□□□ -2.42
SNU56YDR240C YGL041W-AP0C5N3 154 aa-0.09□□□□□ -2.42
SNU56YDR240C FUN14P18411 198 aa-0.09□□□□□ -2.42
SNU56YDR240C MRS4P23500 304 aa-0.09□□□□□ -2.42
SNU56YDR240C PEX34P25584 144 aa-0.09□□□□□ -2.42
SNU56YDR240C ATP19P81451 68 aa-0.09□□□□□ -2.42
SNU56YDR240C TRR1P29509 319 aaKnown RBP-0.1□□□□□ -2.42
SNU56YDR240C ATP7P30902 174 aa-0.1□□□□□ -2.42
SNU56YDR240C DIE2P50076 525 aa-0.1□□□□□ -2.42
SNU56YDR240C ORM1P53224 222 aa-0.1□□□□□ -2.42
SNU56YDR240C IRC19Q07843 230 aa-0.1□□□□□ -2.42
SNU56YDR240C HUG1Q6Q5K6 68 aa-0.1□□□□□ -2.42
SNU56YDR240C MYO1P08964 1928 aa-0.1□□□□□ -2.43
SNU56YDR240C FAS2P19097 1887 aaKnown RBP-0.1□□□□□ -2.43
SNU56YDR240C ATP5P09457 212 aa-0.1□□□□□ -2.43
SNU56YDR240C RAD51P25454 400 aa-0.1□□□□□ -2.43
SNU56YDR240C RCF2P53721 224 aa-0.1□□□□□ -2.43
SNU56YDR240C YNL140CP53910 189 aa-0.1□□□□□ -2.43
SNU56YDR240C EST3Q03096 181 aa-0.1□□□□□ -2.43
SNU56YDR240C SPA2P23201 1466 aaKnown RBP-0.1□□□□□ -2.43
SNU56YDR240C UBR1P19812 1950 aa-0.11□□□□□ -2.43
SNU56YDR240C YGL014C-AP0C5N1 53 aa-0.11□□□□□ -2.43
SNU56YDR240C SRP14P38985 146 aa-0.11□□□□□ -2.43
SNU56YDR240C YGL101WP53144 215 aa-0.11□□□□□ -2.43
SNU56YDR240C GPI11Q06636 219 aa-0.11□□□□□ -2.43
SNU56YDR240C YLR050CQ12155 161 aaKnown RBP-0.11□□□□□ -2.43
SNU56YDR240C YLR046CQ12253 270 aa-0.11□□□□□ -2.43
SNU56YDR240C MHF1Q3E835 90 aa-0.11□□□□□ -2.43
SNU56YDR240C MED11Q99278 115 aa-0.11□□□□□ -2.43
SNU56YDR240C SNF2P22082 1703 aa-0.12□□□□□ -2.43
SNU56YDR240C SRP21P32342 167 aa-0.12□□□□□ -2.43
SNU56YDR240C FES1P38260 290 aa-0.12□□□□□ -2.43
SNU56YDR240C SEC72P39742 193 aaKnown RBP-0.12□□□□□ -2.43
SNU56YDR240C EMC4P53073 190 aa-0.12□□□□□ -2.43
SNU56YDR240C YGL193CP53097 103 aa-0.12□□□□□ -2.43
SNU56YDR240C TMA20P89886 181 aaPredicted RBP-0.12□□□□□ -2.43
SNU56YDR240C YPR153WQ06537 140 aa-0.12□□□□□ -2.43
SNU56YDR240C YPD1Q07688 167 aa-0.12□□□□□ -2.43
SNU56YDR240C RFU1Q08003 200 aa-0.12□□□□□ -2.43
SNU56YDR240C CMD1P06787 147 aaKnown RBP-0.13□□□□□ -2.43
SNU56YDR240C UBI4P0CG63 381 aaKnown RBP-0.13□□□□□ -2.43
SNU56YDR240C FIP1P45976 327 aa-0.13□□□□□ -2.43
SNU56YDR240C GPI2P46961 280 aa-0.13□□□□□ -2.43
SNU56YDR240C YMR122CQ03879 124 aa-0.13□□□□□ -2.43
SNU56YDR240C COX5BP00425 151 aa-0.14□□□□□ -2.43
SNU56YDR240C RPL35AP0CX84 120 aaKnown RBP-0.14□□□□□ -2.43
SNU56YDR240C RPL35BP0CX85 120 aaKnown RBP-0.14□□□□□ -2.43
SNU56YDR240C NHP6AP11632 93 aaKnown RBP-0.14□□□□□ -2.43
SNU56YDR240C RPL30P14120 105 aaKnown RBP-0.14□□□□□ -2.43
SNU56YDR240C YER121WP40076 114 aa-0.14□□□□□ -2.43
SNU56YDR240C YJL218WP40892 196 aaKnown RBP-0.14□□□□□ -2.43
SNU56YDR240C FIT3Q08907 204 aa-0.14□□□□□ -2.43
SNU56YDR240C YPR202WQ08993 238 aa-0.14□□□□□ -2.43
SNU56YDR240C HUT1Q12520 339 aa-0.14□□□□□ -2.43
SNU56YDR240C POR2P40478 281 aa-0.15□□□□□ -2.43
SNU56YDR240C LST8P41318 303 aa-0.15□□□□□ -2.43
SNU56YDR240C GIM3P53900 129 aa-0.15□□□□□ -2.43
SNU56YDR240C LSM3P57743 89 aaKnown RBP-0.15□□□□□ -2.43
SNU56YDR240C SAC3P46674 1301 aa-0.15□□□□□ -2.43
SNU56YDR240C DDR48P18899 430 aaKnown RBP-0.16□□□□□ -2.43
SNU56YDR240C MRPL24P36525 258 aaPredicted RBP-0.16□□□□□ -2.43
SNU56YDR240C AIM4P38305 123 aaPredicted RBP-0.16□□□□□ -2.43
SNU56YDR240C EGD2P38879 174 aaKnown RBP-0.16□□□□□ -2.43
SNU56YDR240C COA4Q05809 96 aa-0.16□□□□□ -2.43
SNU56YDR240C RRT7Q07829 113 aa-0.16□□□□□ -2.43
SNU56YDR240C RDI1Q12434 202 aa-0.16□□□□□ -2.43
SNU56YDR240C RPL40AP0CH08 128 aaKnown RBP-0.16□□□□□ -2.44
SNU56YDR240C RPL40BP0CH09 128 aaKnown RBP-0.16□□□□□ -2.44
SNU56YDR240C YER181CP40097 107 aa-0.16□□□□□ -2.44
SNU56YDR240C DLS1P40366 167 aa-0.16□□□□□ -2.44
SNU56YDR240C YNL019CP53975 284 aa-0.16□□□□□ -2.44
SNU56YDR240C SCS22Q6Q595 175 aa-0.16□□□□□ -2.44
SNU56YDR240C NMT1P14743 455 aa-0.17□□□□□ -2.44
SNU56YDR240C ANB1P19211 157 aa-0.17□□□□□ -2.44
SNU56YDR240C FYV5P25585 152 aa-0.17□□□□□ -2.44
SNU56YDR240C YBR013CP38215 129 aa-0.17□□□□□ -2.44
SNU56YDR240C MIC27P50945 234 aa-0.17□□□□□ -2.44
SNU56YDR240C YCL001W-AP87012 153 aa-0.17□□□□□ -2.44
SNU56YDR240C PFY1P07274 126 aa-0.18□□□□□ -2.44
SNU56YDR240C YHR213WP0CI67 198 aa-0.18□□□□□ -2.44
SNU56YDR240C AUA1P32450 94 aa-0.18□□□□□ -2.44
SNU56YDR240C APQ12P40532 138 aa-0.18□□□□□ -2.44
SNU56YDR240C ARL3Q02804 198 aa-0.18□□□□□ -2.44
SNU56YDR240C ATP14Q12349 124 aa-0.18□□□□□ -2.44
SNU56YDR240C MRPL31P14063 131 aaPredicted RBP-0.19□□□□□ -2.44
SNU56YDR240C RPS1BP23248 255 aaKnown RBP-0.19□□□□□ -2.44
SNU56YDR240C GIM5Q04493 163 aa-0.19□□□□□ -2.44
SNU56YDR240C YLR194CQ05777 254 aa-0.19□□□□□ -2.44
SNU56YDR240C YLR053CQ12026 108 aa-0.19□□□□□ -2.44
SNU56YDR240C YSF3P0C074 85 aaPredicted RBP-0.2□□□□□ -2.44
SNU56YDR240C RME1P32338 300 aaKnown RBP-0.2□□□□□ -2.44
SNU56YDR240C UTP11P34247 250 aaPredicted RBP-0.2□□□□□ -2.44
SNU56YDR240C ATX1P38636 73 aa-0.2□□□□□ -2.44
SNU56YDR240C PHB1P40961 287 aa-0.2□□□□□ -2.44
SNU56YDR240C VPS55P47111 140 aa-0.2□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 94.2 ms