RNA–Protein interactions for RNA: YDR036C

EHD3, Transcript of 3-hydroxyisobutyryl-CoA hydrolase, yeast

Gene EHD3, Length 1,503 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EHD3	YDR036C	CAT8	P39113	1433 aa		5.05	□□□□□ -1.6
EHD3	YDR036C	TIM9	O74700	87 aa		5.04	□□□□□ -1.6
EHD3	YDR036C	SGA1	P08019	549 aa		5.04	□□□□□ -1.6
EHD3	YDR036C	MRS4	P23500	304 aa		5.04	□□□□□ -1.6
EHD3	YDR036C	GEP7	P53171	287 aa		5.04	□□□□□ -1.6
EHD3	YDR036C	CAX4	P53223	239 aa		5.04	□□□□□ -1.6
EHD3	YDR036C	NHP10	Q03435	203 aa		5.04	□□□□□ -1.6
EHD3	YDR036C	RPL9A	P05738	191 aa	Known RBP	5.03	□□□□□ -1.6
EHD3	YDR036C	CPA1	P07258	411 aa	Known RBP	5.03	□□□□□ -1.6
EHD3	YDR036C	YBR090C	P38253	122 aa		5.03	□□□□□ -1.6
EHD3	YDR036C	GAT4	P40569	121 aa		5.03	□□□□□ -1.6
EHD3	YDR036C	PHS1	P40857	217 aa		5.03	□□□□□ -1.6
EHD3	YDR036C	DIE2	P50076	525 aa		5.03	□□□□□ -1.6
EHD3	YDR036C	RPL9B	P51401	191 aa	Known RBP	5.03	□□□□□ -1.6
EHD3	YDR036C	YDR274C	P87283	123 aa		5.03	□□□□□ -1.6
EHD3	YDR036C	YAL067W-A	Q8TGK6	75 aa		5.03	□□□□□ -1.6
EHD3	YDR036C	ECM34	P38728	170 aa		5.02	□□□□□ -1.61
EHD3	YDR036C	YEA6	P39953	335 aa		5.02	□□□□□ -1.61
EHD3	YDR036C	YEL028W	P39989	153 aa		5.02	□□□□□ -1.61
EHD3	YDR036C	RRT13	P40042	185 aa		5.02	□□□□□ -1.61
EHD3	YDR036C	ARC15	P40518	154 aa	RIP-Chip data	5.02	□□□□□ -1.61	not detected
EHD3	YDR036C	YGL041W-A	P0C5N3	154 aa		5.02	□□□□□ -1.61
EHD3	YDR036C	TOM40	P23644	387 aa	Known RBP	5.02	□□□□□ -1.61
EHD3	YDR036C	SFT2	P38166	215 aa		5.02	□□□□□ -1.61
EHD3	YDR036C	YNR062C	P53748	327 aa		5.02	□□□□□ -1.61
EHD3	YDR036C	RSM10	Q03201	203 aa		5.02	□□□□□ -1.61
EHD3	YDR036C	ANT1	Q06497	328 aa		5.02	□□□□□ -1.61
EHD3	YDR036C	SYM1	Q06563	197 aa		5.02	□□□□□ -1.61
EHD3	YDR036C	VMR1	P38735	1592 aa		5.02	□□□□□ -1.61
EHD3	YDR036C	MRPL27	P36526	146 aa	Predicted RBP	5.01	□□□□□ -1.61
EHD3	YDR036C	ODC2	Q99297	307 aa		5.01	□□□□□ -1.61
EHD3	YDR036C	FLO11	P08640	1367 aa		5	□□□□□ -1.61
EHD3	YDR036C	KRE5	P22023	1365 aa		5	□□□□□ -1.61
EHD3	YDR036C	RAD6	P06104	172 aa		5	□□□□□ -1.61
EHD3	YDR036C	SDH4	P37298	181 aa		5	□□□□□ -1.61
EHD3	YDR036C	YHR125W	P38831	101 aa		5	□□□□□ -1.61
EHD3	YDR036C	YER188W	P40103	239 aa		5	□□□□□ -1.61
EHD3	YDR036C	MPM1	P40364	252 aa		5	□□□□□ -1.61
EHD3	YDR036C	DSK2	P48510	373 aa		5	□□□□□ -1.61
EHD3	YDR036C	MRPS16	Q02608	121 aa		5	□□□□□ -1.61
EHD3	YDR036C	YDR102C	Q03864	110 aa		5	□□□□□ -1.61
EHD3	YDR036C	UBC5	P15732	148 aa		4.99	□□□□□ -1.61
EHD3	YDR036C	DDR48	P18899	430 aa	Known RBP	4.99	□□□□□ -1.61
EHD3	YDR036C	NSA2	P40078	261 aa	Known RBP	4.99	□□□□□ -1.61
EHD3	YDR036C	GON7	P46984	123 aa		4.99	□□□□□ -1.61
EHD3	YDR036C	SAS5	Q99314	248 aa		4.99	□□□□□ -1.61
EHD3	YDR036C	YEL045C	P32616	141 aa		4.98	□□□□□ -1.61
EHD3	YDR036C	MRPS8	Q03799	155 aa		4.98	□□□□□ -1.61
EHD3	YDR036C	DUR1,2	P32528	1835 aa	Known RBP	4.98	□□□□□ -1.61
EHD3	YDR036C	NOP1	P15646	327 aa	Known RBP	4.97	□□□□□ -1.61
EHD3	YDR036C	YER135C	P40082	130 aa		4.97	□□□□□ -1.61
EHD3	YDR036C	GNA1	P43577	159 aa	Predicted RBP	4.97	□□□□□ -1.61
EHD3	YDR036C	EAF6	P47128	113 aa		4.97	□□□□□ -1.61
EHD3	YDR036C	RSM27	P53305	110 aa		4.97	□□□□□ -1.61
EHD3	YDR036C	UPS1	Q05776	175 aa		4.97	□□□□□ -1.61
EHD3	YDR036C	ATP20	Q12233	115 aa		4.97	□□□□□ -1.61
EHD3	YDR036C	YOR097C	Q12274	175 aa	Predicted RBP	4.97	□□□□□ -1.61
EHD3	YDR036C	DDP1	Q99321	188 aa	Known RBP	4.97	□□□□□ -1.61
EHD3	YDR036C	COX10	P21592	462 aa		4.97	□□□□□ -1.61
EHD3	YDR036C	UMP1	P38293	148 aa		4.97	□□□□□ -1.61
EHD3	YDR036C	CTR2	P38865	189 aa		4.97	□□□□□ -1.61
EHD3	YDR036C	YAR029W	P39549	74 aa		4.97	□□□□□ -1.61
EHD3	YDR036C	SMD1	Q02260	146 aa	Predicted RBP	4.97	□□□□□ -1.61
EHD3	YDR036C	YMR252C	Q04814	134 aa		4.97	□□□□□ -1.61
EHD3	YDR036C	POR1	P04840	283 aa	Known RBP	4.96	□□□□□ -1.62
EHD3	YDR036C	HYP2	P23301	157 aa	Known RBP	4.96	□□□□□ -1.62
EHD3	YDR036C	BCK1	Q01389	1478 aa		4.96	□□□□□ -1.62
EHD3	YDR036C	YCR050C	P25630	102 aa		4.95	□□□□□ -1.62
EHD3	YDR036C	SCP1	Q08873	200 aa		4.95	□□□□□ -1.62
EHD3	YDR036C	YCR075W-A	Q3E830	75 aa		4.95	□□□□□ -1.62
EHD3	YDR036C	PRE1	P22141	198 aa	Known RBP	4.94	□□□□□ -1.62
EHD3	YDR036C	SPC25	P40014	221 aa		4.94	□□□□□ -1.62
EHD3	YDR036C	ECO1	P43605	281 aa		4.94	□□□□□ -1.62
EHD3	YDR036C	BAT2	P47176	376 aa	Known RBP	4.94	□□□□□ -1.62
EHD3	YDR036C	YNR064C	P53750	290 aa		4.94	□□□□□ -1.62
EHD3	YDR036C	RRT7	Q07829	113 aa		4.94	□□□□□ -1.62
EHD3	YDR036C	RAD10	P06838	210 aa		4.93	□□□□□ -1.62
EHD3	YDR036C	CUP9	P41817	306 aa		4.93	□□□□□ -1.62
EHD3	YDR036C	SPG1	P50088	95 aa		4.93	□□□□□ -1.62
EHD3	YDR036C	RCE1	Q03530	315 aa		4.93	□□□□□ -1.62
EHD3	YDR036C	PEX4	P29340	183 aa		4.92	□□□□□ -1.62
EHD3	YDR036C	PAM16	P42949	149 aa		4.92	□□□□□ -1.62
EHD3	YDR036C	UIP4	Q08926	304 aa		4.92	□□□□□ -1.62
EHD3	YDR036C	YOL085C	Q99345	113 aa		4.92	□□□□□ -1.62
EHD3	YDR036C	PDR11	P40550	1411 aa		4.92	□□□□□ -1.62
EHD3	YDR036C	GEA1	P47102	1408 aa	Predicted RBP	4.92	□□□□□ -1.62
EHD3	YDR036C	HAP3	P13434	144 aa		4.92	□□□□□ -1.62
EHD3	YDR036C	ERV15	P38312	142 aa		4.92	□□□□□ -1.62
EHD3	YDR036C	NSE4	P43124	402 aa		4.92	□□□□□ -1.62
EHD3	YDR036C	LSM8	P47093	109 aa	Known RBP	4.92	□□□□□ -1.62
EHD3	YDR036C	YGR164W	P53291	111 aa		4.92	□□□□□ -1.62
EHD3	YDR036C	SAY1	P53324	424 aa		4.92	□□□□□ -1.62
EHD3	YDR036C	YMR295C	Q03559	197 aa		4.92	□□□□□ -1.62
EHD3	YDR036C	FCF1	Q05498	189 aa	Predicted RBP	4.92	□□□□□ -1.62
EHD3	YDR036C	GTT2	Q12390	233 aa		4.92	□□□□□ -1.62
EHD3	YDR036C	YGL194C-A	Q2V2P6	80 aa		4.92	□□□□□ -1.62
EHD3	YDR036C	YHR032W-A	P0C5N6	59 aa		4.91	□□□□□ -1.62
EHD3	YDR036C	RRT1	P38192	103 aa		4.91	□□□□□ -1.62
EHD3	YDR036C	GAA1	P39012	614 aa		4.91	□□□□□ -1.62
EHD3	YDR036C	MPC3	P53311	146 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms