RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP1	YDR007W	SPT4	P32914	102 aa	Predicted RBP	4.69	□□□□□ -1.66
TRP1	YDR007W	MRPL27	P36526	146 aa	Predicted RBP	4.69	□□□□□ -1.66
TRP1	YDR007W	YER121W	P40076	114 aa		4.69	□□□□□ -1.66
TRP1	YDR007W	HIT1	P46973	164 aa		4.69	□□□□□ -1.66
TRP1	YDR007W	VAR1	P02381	398 aa		4.68	□□□□□ -1.66
TRP1	YDR007W	ADK1	P07170	222 aa	Known RBP	4.68	□□□□□ -1.66
TRP1	YDR007W	PAU1	P0CE88	120 aa		4.68	□□□□□ -1.66
TRP1	YDR007W	PAU14	P0CE89	120 aa		4.68	□□□□□ -1.66
TRP1	YDR007W	PAU6	P0CE90	120 aa		4.68	□□□□□ -1.66
TRP1	YDR007W	PAU18	P0CE91	120 aa		4.68	□□□□□ -1.66
TRP1	YDR007W	PAU8	P0CE92	120 aa		4.68	□□□□□ -1.66
TRP1	YDR007W	PAU11	P0CE93	120 aa		4.68	□□□□□ -1.66
TRP1	YDR007W	ARO4	P32449	370 aa	Known RBP	4.68	□□□□□ -1.66
TRP1	YDR007W	IES6	P32617	166 aa		4.68	□□□□□ -1.66
TRP1	YDR007W	YOR062C	P36025	268 aa		4.68	□□□□□ -1.66
TRP1	YDR007W	PAU13	P38725	120 aa		4.68	□□□□□ -1.66
TRP1	YDR007W	YHR138C	P38841	114 aa	Predicted RBP	4.68	□□□□□ -1.66
TRP1	YDR007W	ERJ5	P43613	295 aa	Predicted RBP	4.68	□□□□□ -1.66
TRP1	YDR007W	PAU4	P53427	120 aa		4.68	□□□□□ -1.66
TRP1	YDR007W	YLR460C	P54007	376 aa		4.68	□□□□□ -1.66
TRP1	YDR007W	PAU10	Q03050	120 aa		4.68	□□□□□ -1.66
TRP1	YDR007W	MRX11	Q03079	207 aa		4.68	□□□□□ -1.66
TRP1	YDR007W	MET31	Q03081	177 aa		4.68	□□□□□ -1.66
TRP1	YDR007W	TSA2	Q04120	196 aa		4.68	□□□□□ -1.66
TRP1	YDR007W	PAU20	Q08322	120 aa		4.68	□□□□□ -1.66
TRP1	YDR007W	YOR015W	Q12169	119 aa		4.68	□□□□□ -1.66
TRP1	YDR007W	PAU9	Q3E770	120 aa		4.68	□□□□□ -1.66
TRP1	YDR007W	GSC2	P40989	1895 aa		4.68	□□□□□ -1.66
TRP1	YDR007W	POR1	P04840	283 aa	Known RBP	4.67	□□□□□ -1.66
TRP1	YDR007W	YBR121C-A	P0C5L4	52 aa		4.67	□□□□□ -1.66
TRP1	YDR007W	URA5	P13298	226 aa	Known RBP	4.67	□□□□□ -1.66
TRP1	YDR007W	ERG24	P32462	438 aa	Known RBP	4.67	□□□□□ -1.66
TRP1	YDR007W	SRP14	P38985	146 aa		4.67	□□□□□ -1.66
TRP1	YDR007W	YGL230C	P53074	147 aa		4.67	□□□□□ -1.66
TRP1	YDR007W	PGA1	P53896	198 aa		4.67	□□□□□ -1.66
TRP1	YDR007W	DAD3	P69850	94 aa		4.67	□□□□□ -1.66
TRP1	YDR007W	UBC7	Q02159	165 aa		4.67	□□□□□ -1.66
TRP1	YDR007W	DPP1	Q05521	289 aa		4.67	□□□□□ -1.66
TRP1	YDR007W	MIM1	Q08176	113 aa		4.67	□□□□□ -1.66
TRP1	YDR007W	YOR029W	Q12243	111 aa		4.67	□□□□□ -1.66
TRP1	YDR007W	YIL102C-A	Q2V2P5	75 aa		4.67	□□□□□ -1.66
TRP1	YDR007W	YPR096C	O13587	100 aa		4.66	□□□□□ -1.66
TRP1	YDR007W	POX1	P13711	748 aa		4.66	□□□□□ -1.66
TRP1	YDR007W	DPM1	P14020	267 aa	Known RBP	4.66	□□□□□ -1.66
TRP1	YDR007W	PRS4	P38063	326 aa	Predicted RBP	4.66	□□□□□ -1.66
TRP1	YDR007W	GPI18	P38211	433 aa		4.66	□□□□□ -1.66
TRP1	YDR007W	SDS24	P38314	527 aa		4.66	□□□□□ -1.66
TRP1	YDR007W	ATX1	P38636	73 aa		4.66	□□□□□ -1.66
TRP1	YDR007W	YNL198C	P40166	100 aa		4.66	□□□□□ -1.66
TRP1	YDR007W	BAT2	P47176	376 aa	Known RBP	4.66	□□□□□ -1.66
TRP1	YDR007W	ERG25	P53045	309 aa		4.66	□□□□□ -1.66
TRP1	YDR007W	EMC4	P53073	190 aa		4.66	□□□□□ -1.66
TRP1	YDR007W	SDS23	P53172	527 aa		4.66	□□□□□ -1.66
TRP1	YDR007W	CAB4	P53332	305 aa		4.66	□□□□□ -1.66
TRP1	YDR007W	YNL140C	P53910	189 aa		4.66	□□□□□ -1.66
TRP1	YDR007W	PRM3	Q08931	133 aa		4.66	□□□□□ -1.66
TRP1	YDR007W	SME1	Q12330	94 aa	Predicted RBP	4.66	□□□□□ -1.66
TRP1	YDR007W	ISD11	Q6Q560	94 aa		4.66	□□□□□ -1.66
TRP1	YDR007W	TRX3	P25372	127 aa		4.65	□□□□□ -1.67
TRP1	YDR007W	YEL045C	P32616	141 aa		4.65	□□□□□ -1.67
TRP1	YDR007W	TIF34	P40217	347 aa	Known RBP	4.65	□□□□□ -1.67
TRP1	YDR007W	EAF6	P47128	113 aa		4.65	□□□□□ -1.67
TRP1	YDR007W	COQ5	P49017	307 aa		4.65	□□□□□ -1.67
TRP1	YDR007W	YNR064C	P53750	290 aa		4.65	□□□□□ -1.67
TRP1	YDR007W	RPL21A	Q02753	160 aa	Known RBP	4.65	□□□□□ -1.67
TRP1	YDR007W	CDD1	Q06549	142 aa		4.65	□□□□□ -1.67
TRP1	YDR007W	YOS1	Q3E834	85 aa		4.65	□□□□□ -1.67
TRP1	YDR007W	COX5A	P00424	153 aa		4.64	□□□□□ -1.67
TRP1	YDR007W	RPS28B	P0C0X0	67 aa	Known RBP	4.64	□□□□□ -1.67
TRP1	YDR007W	YKR104W	P0CE69	306 aa		4.64	□□□□□ -1.67
TRP1	YDR007W	FCY2	P17064	533 aa		4.64	□□□□□ -1.67
TRP1	YDR007W	SCO1	P23833	295 aa		4.64	□□□□□ -1.67
TRP1	YDR007W	GGC1	P38988	300 aa		4.64	□□□□□ -1.67
TRP1	YDR007W	YFL065C	P43539	102 aa		4.64	□□□□□ -1.67
TRP1	YDR007W	MIC27	P50945	234 aa		4.64	□□□□□ -1.67
TRP1	YDR007W	YGL235W	P53071	178 aa		4.64	□□□□□ -1.67
TRP1	YDR007W	SYM1	Q06563	197 aa		4.64	□□□□□ -1.67
TRP1	YDR007W	PAM18	Q07914	168 aa		4.64	□□□□□ -1.67
TRP1	YDR007W	YOR292C	Q08743	309 aa		4.64	□□□□□ -1.67
TRP1	YDR007W	YPR203W	Q08994	102 aa		4.64	□□□□□ -1.67
TRP1	YDR007W	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.64	□□□□□ -1.67
TRP1	YDR007W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.64	□□□□□ -1.67
TRP1	YDR007W	STT4	P37297	1900 aa		4.64	□□□□□ -1.67
TRP1	YDR007W	YGL010W	P25338	174 aa		4.63	□□□□□ -1.67
TRP1	YDR007W	SPS18	P32572	300 aa		4.63	□□□□□ -1.67
TRP1	YDR007W	RPL14A	P36105	138 aa	Known RBP	4.63	□□□□□ -1.67
TRP1	YDR007W	YKR070W	P36151	352 aa	Known RBP	4.63	□□□□□ -1.67
TRP1	YDR007W	YER134C	P40081	178 aa		4.63	□□□□□ -1.67
TRP1	YDR007W	YIP3	P53633	176 aa		4.63	□□□□□ -1.67
TRP1	YDR007W	GRH1	Q04410	372 aa	Known RBP	4.63	□□□□□ -1.67
TRP1	YDR007W	RIM9	Q04734	239 aa		4.63	□□□□□ -1.67
TRP1	YDR007W	YPL264C	Q08980	353 aa		4.63	□□□□□ -1.67
TRP1	YDR007W	YRA1	Q12159	226 aa	Known RBP	4.63	□□□□□ -1.67
TRP1	YDR007W	ODC2	Q99297	307 aa		4.63	□□□□□ -1.67
TRP1	YDR007W	LAA1	P39526	2014 aa		4.62	□□□□□ -1.67
TRP1	YDR007W	FMP49	A0A023PZB3	126 aa		4.62	□□□□□ -1.67
TRP1	YDR007W	YOL162W	P0CF19	215 aa		4.62	□□□□□ -1.67
TRP1	YDR007W	SEC11	P15367	167 aa		4.62	□□□□□ -1.67
TRP1	YDR007W	COX10	P21592	462 aa		4.62	□□□□□ -1.67
TRP1	YDR007W	TEM1	P38987	245 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms