RNA–Protein interactions for RNA: YDR004W

RAD57, Transcript of Protein that stimulates strand exchange, yeast

Gene RAD57, Length 1,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD57	YDR004W	ATG22	P25568	528 aa		3.49	□□□□□ -1.85
RAD57	YDR004W	GLE2	P40066	365 aa		3.49	□□□□□ -1.85
RAD57	YDR004W	TIR3	P40552	269 aa		3.49	□□□□□ -1.85
RAD57	YDR004W	LSM1	P47017	172 aa	Known RBP	3.49	□□□□□ -1.85
RAD57	YDR004W	ARP3	P47117	449 aa	Known RBP	3.49	□□□□□ -1.85
RAD57	YDR004W	ARO8	P53090	500 aa	Known RBP	3.49	□□□□□ -1.85
RAD57	YDR004W	PGA1	P53896	198 aa		3.49	□□□□□ -1.85
RAD57	YDR004W	HSK3	P69852	69 aa		3.49	□□□□□ -1.85
RAD57	YDR004W	AIM34	Q03673	198 aa		3.49	□□□□□ -1.85
RAD57	YDR004W	GPI17	Q04080	534 aa		3.49	□□□□□ -1.85
RAD57	YDR004W	ATG39	Q06159	398 aa		3.49	□□□□□ -1.85
RAD57	YDR004W	ARR2	Q06597	130 aa		3.49	□□□□□ -1.85
RAD57	YDR004W	YGR035W-A	Q45U48	73 aa		3.49	□□□□□ -1.85
RAD57	YDR004W	YMR105W-A	Q8TGS8	64 aa		3.49	□□□□□ -1.85
RAD57	YDR004W	HIS3	P06633	220 aa		3.48	□□□□□ -1.85
RAD57	YDR004W	YLR156W	P0CE96	114 aa		3.48	□□□□□ -1.85
RAD57	YDR004W	YLR159W	P0CE97	114 aa		3.48	□□□□□ -1.85
RAD57	YDR004W	YLR161W	P0CE98	114 aa		3.48	□□□□□ -1.85
RAD57	YDR004W	YCR023C	P25351	611 aa		3.48	□□□□□ -1.85
RAD57	YDR004W	YHR125W	P38831	101 aa		3.48	□□□□□ -1.85
RAD57	YDR004W	SPO73	P40031	143 aa		3.48	□□□□□ -1.85
RAD57	YDR004W	OST2	P46964	130 aa		3.48	□□□□□ -1.85
RAD57	YDR004W	GON7	P46984	123 aa		3.48	□□□□□ -1.85
RAD57	YDR004W	YJR111C	P47148	283 aa	Known RBP	3.48	□□□□□ -1.85
RAD57	YDR004W	VPS71	Q03433	280 aa		3.48	□□□□□ -1.85
RAD57	YDR004W	KIN28	P06242	306 aa		3.47	□□□□□ -1.85
RAD57	YDR004W	FMP23	P38231	175 aa		3.47	□□□□□ -1.85
RAD57	YDR004W	NQM1	P53228	333 aa	Predicted RBP	3.47	□□□□□ -1.85
RAD57	YDR004W	SAY1	P53324	424 aa		3.47	□□□□□ -1.85
RAD57	YDR004W	DIG2	Q03373	323 aa	Known RBP	3.47	□□□□□ -1.85
RAD57	YDR004W	SHH4	Q06236	168 aa		3.47	□□□□□ -1.85
RAD57	YDR004W	YOR268C	Q08734	132 aa		3.47	□□□□□ -1.85
RAD57	YDR004W	YOR289W	Q12012	251 aa	Predicted RBP	3.47	□□□□□ -1.85
RAD57	YDR004W	MRPS28	P21771	286 aa		3.46	□□□□□ -1.86
RAD57	YDR004W	UBC8	P28263	218 aa		3.46	□□□□□ -1.86
RAD57	YDR004W	TFC1	P32367	649 aa		3.46	□□□□□ -1.86
RAD57	YDR004W	IPT1	P38954	527 aa		3.46	□□□□□ -1.86
RAD57	YDR004W	PIR5	P46999	287 aa		3.46	□□□□□ -1.86
RAD57	YDR004W	HHT1	P61830	136 aa		3.46	□□□□□ -1.86
RAD57	YDR004W	REP2	P03872	296 aa		3.45	□□□□□ -1.86
RAD57	YDR004W	RPL30	P14120	105 aa	Known RBP	3.45	□□□□□ -1.86
RAD57	YDR004W	MRPS9	P38120	278 aa		3.45	□□□□□ -1.86
RAD57	YDR004W	SMD3	P43321	101 aa	Known RBP	3.45	□□□□□ -1.86
RAD57	YDR004W	HNT1	Q04344	158 aa	Known RBP	3.45	□□□□□ -1.86
RAD57	YDR004W	Q0255	P03881	472 aa		3.44	□□□□□ -1.86
RAD57	YDR004W	RPL9A	P05738	191 aa	Known RBP	3.44	□□□□□ -1.86
RAD57	YDR004W	RPB3	P16370	318 aa	Known RBP	3.44	□□□□□ -1.86
RAD57	YDR004W	ARC15	P40518	154 aa	RIP-Chip data	3.44	□□□□□ -1.86	not detected
RAD57	YDR004W	FIP1	P45976	327 aa		3.44	□□□□□ -1.86
RAD57	YDR004W	RPL9B	P51401	191 aa	Known RBP	3.44	□□□□□ -1.86
RAD57	YDR004W	RFU1	Q08003	200 aa		3.44	□□□□□ -1.86
RAD57	YDR004W	YHR032W-A	P0C5N6	59 aa		3.43	□□□□□ -1.86
RAD57	YDR004W	MIG1	P27705	504 aa		3.43	□□□□□ -1.86
RAD57	YDR004W	SLM6	P38343	150 aa		3.43	□□□□□ -1.86
RAD57	YDR004W	SOL1	P50278	321 aa		3.43	□□□□□ -1.86
RAD57	YDR004W	DGA1	Q08650	418 aa		3.43	□□□□□ -1.86
RAD57	YDR004W	YPR063C	Q12160	140 aa		3.43	□□□□□ -1.86
RAD57	YDR004W	RIB3	Q99258	208 aa		3.43	□□□□□ -1.86
RAD57	YDR004W	ADH3	P07246	375 aa	Known RBP	3.42	□□□□□ -1.86
RAD57	YDR004W	BET1	P22804	142 aa		3.42	□□□□□ -1.86
RAD57	YDR004W	FCY1	Q12178	158 aa		3.42	□□□□□ -1.86
RAD57	YDR004W	MPD1	Q12404	318 aa	Known RBP	3.42	□□□□□ -1.86
RAD57	YDR004W	PET54	P10834	293 aa		3.41	□□□□□ -1.86
RAD57	YDR004W	ATP15	P21306	62 aa		3.41	□□□□□ -1.86
RAD57	YDR004W	SKI6	P46948	246 aa	Predicted RBP	3.41	□□□□□ -1.86
RAD57	YDR004W	XPT1	P47165	209 aa		3.41	□□□□□ -1.86
RAD57	YDR004W	YKR005C	Q02203	525 aa		3.41	□□□□□ -1.86
RAD57	YDR004W	SPC24	Q04477	213 aa		3.41	□□□□□ -1.86
RAD57	YDR004W	GAL83	Q04739	417 aa		3.41	□□□□□ -1.86
RAD57	YDR004W	YLR031W	Q07978	186 aa		3.41	□□□□□ -1.86
RAD57	YDR004W	PST2	Q12335	198 aa	Known RBP	3.41	□□□□□ -1.86
RAD57	YDR004W	CKS1	P20486	150 aa	Known RBP	3.4	□□□□□ -1.86
RAD57	YDR004W	MOG1	P47123	218 aa		3.4	□□□□□ -1.86
RAD57	YDR004W	CAB4	P53332	305 aa		3.4	□□□□□ -1.86
RAD57	YDR004W	ATO3	Q12359	275 aa		3.4	□□□□□ -1.86
RAD57	YDR004W	HUT1	Q12520	339 aa		3.4	□□□□□ -1.86
RAD57	YDR004W	SOD1	P00445	154 aa	Known RBP	3.39	□□□□□ -1.87
RAD57	YDR004W	URA5	P13298	226 aa	Known RBP	3.39	□□□□□ -1.87
RAD57	YDR004W	SUA7	P29055	345 aa	Predicted RBP	3.39	□□□□□ -1.87
RAD57	YDR004W	DLS1	P40366	167 aa		3.39	□□□□□ -1.87
RAD57	YDR004W	CCC1	P47818	322 aa		3.39	□□□□□ -1.87
RAD57	YDR004W	YPL067C	Q02754	198 aa		3.39	□□□□□ -1.87
RAD57	YDR004W	GRX5	Q02784	150 aa		3.39	□□□□□ -1.87
RAD57	YDR004W	MAK3	Q03503	176 aa		3.39	□□□□□ -1.87
RAD57	YDR004W	PLP1	Q04004	230 aa		3.39	□□□□□ -1.87
RAD57	YDR004W	OCH1	P31755	480 aa		3.38	□□□□□ -1.87
RAD57	YDR004W	MID2	P36027	376 aa		3.38	□□□□□ -1.87
RAD57	YDR004W	CSH1	P38287	376 aa		3.38	□□□□□ -1.87
RAD57	YDR004W	ERJ5	P43613	295 aa	Predicted RBP	3.38	□□□□□ -1.87
RAD57	YDR004W	YMR099C	Q03161	297 aa	Known RBP	3.38	□□□□□ -1.87
RAD57	YDR004W	NMA1	Q06178	401 aa	Known RBP	3.38	□□□□□ -1.87
RAD57	YDR004W	TMA19	P35691	167 aa	Known RBP	3.38	□□□□□ -1.87
RAD57	YDR004W	YIL059C	P40520	121 aa		3.38	□□□□□ -1.87
RAD57	YDR004W	SER2	P42941	309 aa		3.38	□□□□□ -1.87
RAD57	YDR004W	PAM16	P42949	149 aa		3.38	□□□□□ -1.87
RAD57	YDR004W	TDA4	P47153	279 aa		3.38	□□□□□ -1.87
RAD57	YDR004W	YOL014W	Q08110	124 aa		3.38	□□□□□ -1.87
RAD57	YDR004W	YPR014C	Q6B0W2	109 aa		3.38	□□□□□ -1.87
RAD57	YDR004W	SPO13	P23624	291 aa		3.37	□□□□□ -1.87
RAD57	YDR004W	YKR032W	P36127	104 aa		3.37	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms