RNA–Protein interactions for RNA: YCR072C

RSA4, Transcript of WD-repeat protein involved in ribosome biogenesis, yeast

Gene RSA4, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA4	YCR072C	SUN4	P53616	420 aa		5.18	□□□□□ -1.58
RSA4	YCR072C	YMR178W	Q03219	274 aa	Known RBP	5.18	□□□□□ -1.58
RSA4	YCR072C	YRA1	Q12159	226 aa	Known RBP	5.18	□□□□□ -1.58
RSA4	YCR072C	TAD3	Q9URQ3	322 aa		5.18	□□□□□ -1.58
RSA4	YCR072C	MSB2	P32334	1306 aa		5.17	□□□□□ -1.58
RSA4	YCR072C	QCR9	P22289	66 aa		5.17	□□□□□ -1.58
RSA4	YCR072C	ECM34	P38728	170 aa		5.17	□□□□□ -1.58
RSA4	YCR072C	SWT21	P53873	357 aa	Predicted RBP	5.17	□□□□□ -1.58
RSA4	YCR072C	YPL229W	Q99395	206 aa		5.17	□□□□□ -1.58
RSA4	YCR072C	YER039C-A	P0CD97	72 aa		5.16	□□□□□ -1.58
RSA4	YCR072C	MSI1	P13712	422 aa		5.16	□□□□□ -1.58
RSA4	YCR072C	MRPL20	P22354	195 aa	Predicted RBP	5.16	□□□□□ -1.58
RSA4	YCR072C	RFA3	P26755	122 aa	Known RBP	5.16	□□□□□ -1.58
RSA4	YCR072C	RPB7	P34087	171 aa		5.16	□□□□□ -1.58
RSA4	YCR072C	YGP1	P38616	354 aa	Known RBP	5.16	□□□□□ -1.58
RSA4	YCR072C	CYB5	P40312	120 aa		5.16	□□□□□ -1.58
RSA4	YCR072C	URM1	P40554	99 aa	Predicted RBP	5.16	□□□□□ -1.58
RSA4	YCR072C	PIR3	Q03180	325 aa		5.16	□□□□□ -1.58
RSA4	YCR072C	YMR321C	Q04898	105 aa		5.16	□□□□□ -1.58
RSA4	YCR072C	YLR012C	Q07927	99 aa		5.16	□□□□□ -1.58
RSA4	YCR072C	YPL264C	Q08980	353 aa		5.16	□□□□□ -1.58
RSA4	YCR072C	YBL112C	Q3E7Y4	105 aa		5.16	□□□□□ -1.58
RSA4	YCR072C	CPT1	P17898	393 aa		5.15	□□□□□ -1.58
RSA4	YCR072C	ERG2	P32352	222 aa		5.15	□□□□□ -1.58
RSA4	YCR072C	RPL32	P38061	130 aa	Known RBP	5.15	□□□□□ -1.58
RSA4	YCR072C	RPP1	P38786	293 aa		5.15	□□□□□ -1.58
RSA4	YCR072C	PCL5	P38794	229 aa		5.15	□□□□□ -1.58
RSA4	YCR072C	GGC1	P38988	300 aa		5.15	□□□□□ -1.58
RSA4	YCR072C	TIM17	P39515	158 aa		5.15	□□□□□ -1.58
RSA4	YCR072C	MBB1	P39534	108 aa		5.15	□□□□□ -1.58
RSA4	YCR072C	DFG10	P40526	253 aa		5.15	□□□□□ -1.58
RSA4	YCR072C	YNR048W	P53740	393 aa		5.15	□□□□□ -1.58
RSA4	YCR072C	MRPL51	Q06090	140 aa	Predicted RBP	5.15	□□□□□ -1.58
RSA4	YCR072C	CSR2	Q12734	1121 aa		5.15	□□□□□ -1.58
RSA4	YCR072C	RPS16A	P0CX51	143 aa	Known RBP	5.14	□□□□□ -1.59
RSA4	YCR072C	RPS16B	P0CX52	143 aa	Known RBP	5.14	□□□□□ -1.59
RSA4	YCR072C	CTA1	P15202	515 aa		5.14	□□□□□ -1.59
RSA4	YCR072C	NHP2	P32495	156 aa	Predicted RBP	5.14	□□□□□ -1.59
RSA4	YCR072C	TIM12	P32830	109 aa		5.14	□□□□□ -1.59
RSA4	YCR072C	ERG28	P40030	148 aa		5.14	□□□□□ -1.59
RSA4	YCR072C	YIL059C	P40520	121 aa		5.14	□□□□□ -1.59
RSA4	YCR072C	APQ12	P40532	138 aa		5.14	□□□□□ -1.59
RSA4	YCR072C	TDA4	P47153	279 aa		5.14	□□□□□ -1.59
RSA4	YCR072C	BRP1	P53194	125 aa		5.14	□□□□□ -1.59
RSA4	YCR072C	CDH1	P53197	566 aa		5.14	□□□□□ -1.59
RSA4	YCR072C	POP3	P53833	195 aa	Predicted RBP	5.14	□□□□□ -1.59
RSA4	YCR072C	YPL039W	Q03080	316 aa		5.14	□□□□□ -1.59
RSA4	YCR072C	AIM34	Q03673	198 aa		5.14	□□□□□ -1.59
RSA4	YCR072C	YPQ1	Q12010	308 aa		5.14	□□□□□ -1.59
RSA4	YCR072C	FLO9	P39712	1322 aa		5.14	□□□□□ -1.59
RSA4	YCR072C	YLL053C	P0CD98	152 aa		5.13	□□□□□ -1.59
RSA4	YCR072C	YBL059W	P34224	193 aa		5.13	□□□□□ -1.59
RSA4	YCR072C	YPT10	P38146	199 aa		5.13	□□□□□ -1.59
RSA4	YCR072C	YHL026C	P38740	315 aa		5.13	□□□□□ -1.59
RSA4	YCR072C	SNF11	P38956	169 aa		5.13	□□□□□ -1.59
RSA4	YCR072C	YNL200C	P40165	246 aa	Known RBP	5.13	□□□□□ -1.59
RSA4	YCR072C	CWP2	P43497	92 aa		5.13	□□□□□ -1.59
RSA4	YCR072C	YIP1	P53039	248 aa		5.13	□□□□□ -1.59
RSA4	YCR072C	YGR039W	P53225	103 aa		5.13	□□□□□ -1.59
RSA4	YCR072C	CPD1	P53314	239 aa		5.13	□□□□□ -1.59
RSA4	YCR072C	YOR376W	Q08900	122 aa		5.13	□□□□□ -1.59
RSA4	YCR072C	USB1	Q12208	290 aa	Known RBP	5.13	□□□□□ -1.59
RSA4	YCR072C	UBC5	P15732	148 aa		5.13	□□□□□ -1.59
RSA4	YCR072C	QRI5	P32344	111 aa		5.13	□□□□□ -1.59
RSA4	YCR072C	VMA11	P32842	164 aa		5.13	□□□□□ -1.59
RSA4	YCR072C	PRS4	P38063	326 aa	Predicted RBP	5.13	□□□□□ -1.59
RSA4	YCR072C	YGR269W	P40326	108 aa		5.13	□□□□□ -1.59
RSA4	YCR072C	SAS2	P40963	338 aa		5.13	□□□□□ -1.59
RSA4	YCR072C	BRR6	P53062	197 aa		5.13	□□□□□ -1.59
RSA4	YCR072C	YDL218W	Q07629	317 aa		5.13	□□□□□ -1.59
RSA4	YCR072C	AYT1	Q12226	474 aa		5.13	□□□□□ -1.59
RSA4	YCR072C	YDL180W	Q12301	547 aa		5.13	□□□□□ -1.59
RSA4	YCR072C	YPR064W	Q12492	139 aa		5.13	□□□□□ -1.59
RSA4	YCR072C	EGT2	P42835	1041 aa		5.12	□□□□□ -1.59
RSA4	YCR072C	MIX17	Q03667	156 aa		5.12	□□□□□ -1.59
RSA4	YCR072C	HPA2	Q06592	156 aa		5.12	□□□□□ -1.59
RSA4	YCR072C	RNH203	Q12338	110 aa		5.12	□□□□□ -1.59
RSA4	YCR072C	OPI3	P05375	206 aa		5.11	□□□□□ -1.59
RSA4	YCR072C	STE18	P18852	110 aa		5.11	□□□□□ -1.59
RSA4	YCR072C	YKL044W	P36092	106 aa		5.11	□□□□□ -1.59
RSA4	YCR072C	OM14	P38325	134 aa		5.11	□□□□□ -1.59
RSA4	YCR072C	YNL194C	P40169	301 aa		5.11	□□□□□ -1.59
RSA4	YCR072C	CCS1	P40202	249 aa	Known RBP	5.11	□□□□□ -1.59
RSA4	YCR072C	YIL163C	P40448	117 aa		5.11	□□□□□ -1.59
RSA4	YCR072C	GEP7	P53171	287 aa		5.11	□□□□□ -1.59
RSA4	YCR072C	TPC1	P53257	314 aa		5.11	□□□□□ -1.59
RSA4	YCR072C	YMR007W	Q03675	126 aa		5.11	□□□□□ -1.59
RSA4	YCR072C	DAP1	Q12091	152 aa		5.11	□□□□□ -1.59
RSA4	YCR072C	RPA12	P32529	125 aa	Known RBP	5.1	□□□□□ -1.59
RSA4	YCR072C	ERG13	P54839	491 aa	Known RBP	5.1	□□□□□ -1.59
RSA4	YCR072C	RAV2	Q03956	351 aa		5.1	□□□□□ -1.59
RSA4	YCR072C	HRT1	Q08273	121 aa		5.1	□□□□□ -1.59
RSA4	YCR072C	NCE102	Q12207	173 aa	RIP-Chip data	5.1	□□□□□ -1.59	not detected
RSA4	YCR072C	YKL183C-A	Q3E765	70 aa		5.1	□□□□□ -1.59
RSA4	YCR072C	YCR085W	P25650	117 aa		5.09	□□□□□ -1.59
RSA4	YCR072C	MST28	P39552	234 aa		5.09	□□□□□ -1.59
RSA4	YCR072C	YFR045W	P43617	309 aa		5.09	□□□□□ -1.59
RSA4	YCR072C	YOL029C	Q08187	201 aa		5.09	□□□□□ -1.59
RSA4	YCR072C	YAL063C-A	Q3E791	96 aa		5.09	□□□□□ -1.59
RSA4	YCR072C	YFL041W-A	Q3E817	63 aa		5.09	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 71.1 ms