RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAF1	YBR280C	RPA14	P50106	137 aa		3.17	□□□□□ -1.9
SAF1	YBR280C	YMR007W	Q03675	126 aa		3.17	□□□□□ -1.9
SAF1	YBR280C	COA4	Q05809	96 aa		3.17	□□□□□ -1.9
SAF1	YBR280C	UTP11	P34247	250 aa	Predicted RBP	3.17	□□□□□ -1.9
SAF1	YBR280C	ELF1	P36053	145 aa		3.17	□□□□□ -1.9
SAF1	YBR280C	YBR242W	P38331	238 aa		3.17	□□□□□ -1.9
SAF1	YBR280C	YKE4	P40544	346 aa		3.17	□□□□□ -1.9
SAF1	YBR280C	YGR240C-A	Q3E786	66 aa		3.17	□□□□□ -1.9
SAF1	YBR280C	Q0255	P03881	472 aa		3.16	□□□□□ -1.9
SAF1	YBR280C	YBL059W	P34224	193 aa		3.16	□□□□□ -1.9
SAF1	YBR280C	ATP23	P53722	227 aa		3.16	□□□□□ -1.9
SAF1	YBR280C	PBA1	Q05778	276 aa		3.16	□□□□□ -1.9
SAF1	YBR280C	YLR179C	Q06252	201 aa	Known RBP	3.16	□□□□□ -1.9
SAF1	YBR280C	BER1	Q06688	274 aa	Known RBP	3.16	□□□□□ -1.9
SAF1	YBR280C	ISN1	Q99312	450 aa		3.16	□□□□□ -1.9
SAF1	YBR280C	YLR302C	O13544	120 aa		3.15	□□□□□ -1.9
SAF1	YBR280C	VAR1	P02381	398 aa		3.15	□□□□□ -1.9
SAF1	YBR280C	RPS2	P25443	254 aa	Known RBP	3.15	□□□□□ -1.9
SAF1	YBR280C	DID2	P69771	204 aa		3.15	□□□□□ -1.9
SAF1	YBR280C	YDL242W	Q07746	117 aa		3.15	□□□□□ -1.9
SAF1	YBR280C	DSK2	P48510	373 aa		3.15	□□□□□ -1.91
SAF1	YBR280C	PNC1	P53184	216 aa	Known RBP	3.15	□□□□□ -1.91
SAF1	YBR280C	MRX11	Q03079	207 aa		3.15	□□□□□ -1.91
SAF1	YBR280C	YMR253C	Q04835	414 aa		3.15	□□□□□ -1.91
SAF1	YBR280C	FIT2	Q08906	153 aa		3.15	□□□□□ -1.91
SAF1	YBR280C	YLL066W-B	Q8TGJ7	56 aa		3.15	□□□□□ -1.91
SAF1	YBR280C	YDR157W	A0A023PZE8	133 aa		3.14	□□□□□ -1.91
SAF1	YBR280C	HTB2	P02294	131 aa		3.14	□□□□□ -1.91
SAF1	YBR280C	HSP12	P22943	109 aa	Known RBP	3.14	□□□□□ -1.91
SAF1	YBR280C	COQ3	P27680	312 aa		3.14	□□□□□ -1.91
SAF1	YBR280C	NPL6	P32832	435 aa		3.14	□□□□□ -1.91
SAF1	YBR280C	ASP1	P38986	381 aa	Predicted RBP	3.14	□□□□□ -1.91
SAF1	YBR280C	RRT13	P40042	185 aa		3.14	□□□□□ -1.91
SAF1	YBR280C	ATX2	Q12067	313 aa		3.14	□□□□□ -1.91
SAF1	YBR280C	YPL229W	Q99395	206 aa		3.14	□□□□□ -1.91
SAF1	YBR280C	QCR9	P22289	66 aa		3.13	□□□□□ -1.91
SAF1	YBR280C	MRPL20	P22354	195 aa	Predicted RBP	3.13	□□□□□ -1.91
SAF1	YBR280C	PEX7	P39108	375 aa		3.13	□□□□□ -1.91
SAF1	YBR280C	SPI1	P40092	148 aa		3.13	□□□□□ -1.91
SAF1	YBR280C	YFL067W	P43537	175 aa		3.13	□□□□□ -1.91
SAF1	YBR280C	YJL028W	P47062	111 aa		3.13	□□□□□ -1.91
SAF1	YBR280C	AVO2	Q04749	426 aa		3.13	□□□□□ -1.91
SAF1	YBR280C	RTC6	O14464	93 aa		3.13	□□□□□ -1.91
SAF1	YBR280C	CPT1	P17898	393 aa		3.13	□□□□□ -1.91
SAF1	YBR280C	SPO13	P23624	291 aa		3.13	□□□□□ -1.91
SAF1	YBR280C	CDC50	P25656	391 aa		3.13	□□□□□ -1.91
SAF1	YBR280C	YEA4	P40004	342 aa		3.13	□□□□□ -1.91
SAF1	YBR280C	HUA1	P40325	198 aa		3.13	□□□□□ -1.91
SAF1	YBR280C	KEG1	P43614	200 aa		3.13	□□□□□ -1.91
SAF1	YBR280C	MRPS16	Q02608	121 aa		3.13	□□□□□ -1.91
SAF1	YBR280C	ATC1	Q04005	294 aa		3.13	□□□□□ -1.91
SAF1	YBR280C	YLR125W	Q12138	136 aa		3.13	□□□□□ -1.91
SAF1	YBR280C	MRS1	P07266	363 aa		3.12	□□□□□ -1.91
SAF1	YBR280C	TAL1	P15019	335 aa	Known RBP	3.12	□□□□□ -1.91
SAF1	YBR280C	KRE9	P39005	276 aa		3.12	□□□□□ -1.91
SAF1	YBR280C	YNL217W	P40152	326 aa		3.12	□□□□□ -1.91
SAF1	YBR280C	YCH1	P42937	148 aa		3.12	□□□□□ -1.91
SAF1	YBR280C	YJL197C-A	P0C5P0	93 aa		3.11	□□□□□ -1.91
SAF1	YBR280C	RPL16B	P26785	198 aa	Known RBP	3.11	□□□□□ -1.91
SAF1	YBR280C	AHT1	P29589	182 aa		3.11	□□□□□ -1.91
SAF1	YBR280C	YPT53	P36019	220 aa		3.11	□□□□□ -1.91
SAF1	YBR280C	YMR141C	P40211	102 aa		3.11	□□□□□ -1.91
SAF1	YBR280C	YJR111C	P47148	283 aa	Known RBP	3.11	□□□□□ -1.91
SAF1	YBR280C	YDR366C	P87287	132 aa		3.11	□□□□□ -1.91
SAF1	YBR280C	YDR034C-A	P0C289	58 aa		3.11	□□□□□ -1.91
SAF1	YBR280C	MRPL28	P36527	147 aa		3.11	□□□□□ -1.91
SAF1	YBR280C	YDL183C	P48569	320 aa		3.11	□□□□□ -1.91
SAF1	YBR280C	RRT15	Q3E811	62 aa		3.11	□□□□□ -1.91
SAF1	YBR280C	MRP10	O75012	95 aa		3.1	□□□□□ -1.91
SAF1	YBR280C	RPL31B	P0C2H9	113 aa	Known RBP	3.1	□□□□□ -1.91
SAF1	YBR280C	TRS20	P38334	175 aa		3.1	□□□□□ -1.91
SAF1	YBR280C	SVP26	P38869	228 aa		3.1	□□□□□ -1.91
SAF1	YBR280C	MRPL50	P53724	139 aa		3.1	□□□□□ -1.91
SAF1	YBR280C	DPP1	Q05521	289 aa		3.1	□□□□□ -1.91
SAF1	YBR280C	FCF2	Q12035	217 aa	Predicted RBP	3.1	□□□□□ -1.91
SAF1	YBR280C	AGA1	P32323	725 aa		3.09	□□□□□ -1.91
SAF1	YBR280C	RIB4	P50861	169 aa	Predicted RBP	3.09	□□□□□ -1.91
SAF1	YBR280C	BRP1	P53194	125 aa		3.09	□□□□□ -1.91
SAF1	YBR280C	DFM1	Q12743	341 aa	Known RBP	3.09	□□□□□ -1.91
SAF1	YBR280C	KTI12	P34253	313 aa	Known RBP	3.09	□□□□□ -1.92
SAF1	YBR280C	NNK1	P36003	928 aa		3.09	□□□□□ -1.92
SAF1	YBR280C	EMC5	P40540	141 aa		3.09	□□□□□ -1.92
SAF1	YBR280C	MGA1	P53050	456 aa		3.09	□□□□□ -1.92
SAF1	YBR280C	YGL117W	P53133	265 aa		3.09	□□□□□ -1.92
SAF1	YBR280C	CAF40	P53829	373 aa		3.09	□□□□□ -1.92
SAF1	YBR280C	AIM34	Q03673	198 aa		3.09	□□□□□ -1.92
SAF1	YBR280C	RAV2	Q03956	351 aa		3.09	□□□□□ -1.92
SAF1	YBR280C	YBR200W-A	Q3E755	54 aa		3.09	□□□□□ -1.92
SAF1	YBR280C	DIF1	O13577	133 aa		3.08	□□□□□ -1.92
SAF1	YBR280C	RPL33A	P05744	107 aa	Known RBP	3.08	□□□□□ -1.92
SAF1	YBR280C	ACB1	P31787	87 aa		3.08	□□□□□ -1.92
SAF1	YBR280C	ACP1	P32463	125 aa		3.08	□□□□□ -1.92
SAF1	YBR280C	RPL33B	P41056	107 aa	Known RBP	3.08	□□□□□ -1.92
SAF1	YBR280C	YNR066C	P53752	436 aa		3.08	□□□□□ -1.92
SAF1	YBR280C	CKS1	P20486	150 aa	Known RBP	3.07	□□□□□ -1.92
SAF1	YBR280C	RNA15	P25299	296 aa	Predicted RBP	3.07	□□□□□ -1.92
SAF1	YBR280C	YHR173C	P38864	112 aa		3.07	□□□□□ -1.92
SAF1	YBR280C	POG1	P40473	351 aa		3.07	□□□□□ -1.92
SAF1	YBR280C	DAD4	P69851	72 aa		3.07	□□□□□ -1.92
SAF1	YBR280C	FCF1	Q05498	189 aa	Predicted RBP	3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms