RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C RPL9BP51401 191 aaKnown RBP3.38□□□□□ -1.87
PTA1YAL043C BOR1P53838 576 aa3.38□□□□□ -1.87
PTA1YAL043C RRS1Q08746 203 aaKnown RBP3.38□□□□□ -1.87
PTA1YAL043C YPR071WQ12346 211 aa3.38□□□□□ -1.87
PTA1YAL043C LSM2P38203 95 aaKnown RBP3.37□□□□□ -1.87
PTA1YAL043C SNU13P39990 126 aaKnown RBP3.37□□□□□ -1.87
PTA1YAL043C YCH1P42937 148 aa3.37□□□□□ -1.87
PTA1YAL043C YJL028WP47062 111 aa3.37□□□□□ -1.87
PTA1YAL043C IZH1Q03419 316 aa3.37□□□□□ -1.87
PTA1YAL043C UPS1Q05776 175 aa3.37□□□□□ -1.87
PTA1YAL043C LIP2Q06005 328 aa3.37□□□□□ -1.87
PTA1YAL043C ATG39Q06159 398 aa3.37□□□□□ -1.87
PTA1YAL043C ATG33Q06485 197 aa3.37□□□□□ -1.87
PTA1YAL043C YPL257WQ08974 193 aa3.37□□□□□ -1.87
PTA1YAL043C SEN1Q00416 2231 aaKnown RBP3.37□□□□□ -1.87
PTA1YAL043C CPR1P14832 162 aaKnown RBP3.37□□□□□ -1.87
PTA1YAL043C SUA7P29055 345 aaPredicted RBP3.37□□□□□ -1.87
PTA1YAL043C SPS18P32572 300 aa3.37□□□□□ -1.87
PTA1YAL043C FZF1P32805 299 aa3.37□□□□□ -1.87
PTA1YAL043C NNK1P36003 928 aa3.37□□□□□ -1.87
PTA1YAL043C RPF1P38805 295 aaKnown RBP3.37□□□□□ -1.87
PTA1YAL043C YJL118WP47022 219 aa3.37□□□□□ -1.87
PTA1YAL043C IRC23Q08416 157 aa3.37□□□□□ -1.87
PTA1YAL043C FCY1Q12178 158 aa3.37□□□□□ -1.87
PTA1YAL043C TPT1Q12272 230 aaKnown RBP3.37□□□□□ -1.87
PTA1YAL043C RPS28BP0C0X0 67 aaKnown RBP3.36□□□□□ -1.87
PTA1YAL043C ZRT1P32804 376 aa3.36□□□□□ -1.87
PTA1YAL043C TEM1P38987 245 aa3.36□□□□□ -1.87
PTA1YAL043C CRZ1P53968 678 aa3.36□□□□□ -1.87
PTA1YAL043C SLO1Q3E784 85 aa3.36□□□□□ -1.87
PTA1YAL043C BOL1Q3E793 110 aa3.36□□□□□ -1.87
PTA1YAL043C RPS28AQ3E7X9 67 aaPredicted RBP3.36□□□□□ -1.87
PTA1YAL043C ILV5P06168 395 aaKnown RBP3.36□□□□□ -1.87
PTA1YAL043C RAD23P32628 398 aaKnown RBP3.36□□□□□ -1.87
PTA1YAL043C RPB11P38902 120 aa3.36□□□□□ -1.87
PTA1YAL043C YMR141CP40211 102 aa3.36□□□□□ -1.87
PTA1YAL043C YFL051CP43552 160 aa3.36□□□□□ -1.87
PTA1YAL043C COA6Q3E846 104 aa3.36□□□□□ -1.87
PTA1YAL043C HEM4P06174 275 aa3.35□□□□□ -1.87
PTA1YAL043C PIS1P06197 220 aaKnown RBP3.35□□□□□ -1.87
PTA1YAL043C RPS22AP0C0W1 130 aaKnown RBP3.35□□□□□ -1.87
PTA1YAL043C RPL31AP0C2H8 113 aaKnown RBP3.35□□□□□ -1.87
PTA1YAL043C RPL31BP0C2H9 113 aaKnown RBP3.35□□□□□ -1.87
PTA1YAL043C YPT53P36019 220 aa3.35□□□□□ -1.87
PTA1YAL043C YNL200CP40165 246 aaKnown RBP3.35□□□□□ -1.87
PTA1YAL043C SAS2P40963 338 aa3.35□□□□□ -1.87
PTA1YAL043C YGL260WP53056 76 aa3.35□□□□□ -1.87
PTA1YAL043C COX18P53239 316 aa3.35□□□□□ -1.87
PTA1YAL043C YGR151CP53287 111 aa3.35□□□□□ -1.87
PTA1YAL043C CPD1P53314 239 aa3.35□□□□□ -1.87
PTA1YAL043C RPL15BP54780 204 aaPredicted RBP3.35□□□□□ -1.87
PTA1YAL043C ARC18Q05933 178 aaKnown RBP3.35□□□□□ -1.87
PTA1YAL043C FSF1Q12029 327 aaKnown RBP3.35□□□□□ -1.87
PTA1YAL043C YMR105W-AQ8TGS8 64 aa3.35□□□□□ -1.87
PTA1YAL043C RPL23AP0CX41 137 aaKnown RBP3.34□□□□□ -1.87
PTA1YAL043C RPL23BP0CX42 137 aaKnown RBP3.34□□□□□ -1.87
PTA1YAL043C PRE5P40302 234 aaKnown RBP3.34□□□□□ -1.87
PTA1YAL043C GPI2P46961 280 aa3.34□□□□□ -1.87
PTA1YAL043C DUG3P53871 357 aa3.34□□□□□ -1.87
PTA1YAL043C IRC25Q07951 179 aa3.34□□□□□ -1.87
PTA1YAL043C JID1Q12350 301 aa3.34□□□□□ -1.87
PTA1YAL043C YOR032W-AQ8TGS1 66 aa3.34□□□□□ -1.87
PTA1YAL043C YBR121C-AP0C5L4 52 aa3.34□□□□□ -1.87
PTA1YAL043C MIX23P38162 196 aa3.34□□□□□ -1.87
PTA1YAL043C MIC12P38341 106 aa3.34□□□□□ -1.87
PTA1YAL043C ECM14P38836 430 aa3.34□□□□□ -1.87
PTA1YAL043C OXA1P39952 402 aa3.34□□□□□ -1.87
PTA1YAL043C YNL194CP40169 301 aa3.34□□□□□ -1.87
PTA1YAL043C YNL234WP53857 426 aa3.34□□□□□ -1.87
PTA1YAL043C RRG8Q06109 277 aa3.34□□□□□ -1.87
PTA1YAL043C MCH1Q07376 486 aa3.34□□□□□ -1.87
PTA1YAL043C ATO3Q12359 275 aa3.34□□□□□ -1.87
PTA1YAL043C BPH1P25356 2167 aa3.34□□□□□ -1.88
PTA1YAL043C HSP12P22943 109 aaKnown RBP3.33□□□□□ -1.88
PTA1YAL043C DOG2P38773 246 aa3.33□□□□□ -1.88
PTA1YAL043C DOG1P38774 246 aa3.33□□□□□ -1.88
PTA1YAL043C RPA43P46669 326 aa3.33□□□□□ -1.88
PTA1YAL043C YMR181CQ03231 154 aa3.33□□□□□ -1.88
PTA1YAL043C PRP11Q07350 266 aaPredicted RBP3.33□□□□□ -1.88
PTA1YAL043C GAT3Q07928 141 aa3.33□□□□□ -1.88
PTA1YAL043C YDR157WA0A023PZE8 133 aa3.33□□□□□ -1.88
PTA1YAL043C COX2P00410 251 aa3.33□□□□□ -1.88
PTA1YAL043C HAP3P13434 144 aa3.33□□□□□ -1.88
PTA1YAL043C YKL187CP34231 750 aa3.33□□□□□ -1.88
PTA1YAL043C SFT2P38166 215 aa3.33□□□□□ -1.88
PTA1YAL043C YER188WP40103 239 aa3.33□□□□□ -1.88
PTA1YAL043C YFR045WP43617 309 aa3.33□□□□□ -1.88
PTA1YAL043C YDR366CP87287 132 aa3.33□□□□□ -1.88
PTA1YAL043C SDH7Q04401 133 aa3.33□□□□□ -1.88
PTA1YAL043C YDL157CQ12082 118 aa3.33□□□□□ -1.88
PTA1YAL043C RDL1Q12305 139 aaKnown RBP3.33□□□□□ -1.88
PTA1YAL043C YLR122CQ12312 125 aa3.33□□□□□ -1.88
PTA1YAL043C YGL258W-AQ3E740 77 aa3.33□□□□□ -1.88
PTA1YAL043C YCR023CP25351 611 aa3.32□□□□□ -1.88
PTA1YAL043C PCL2P25693 308 aa3.32□□□□□ -1.88
PTA1YAL043C PRM5P40476 318 aa3.32□□□□□ -1.88
PTA1YAL043C GZF3P42944 551 aaKnown RBP3.32□□□□□ -1.88
PTA1YAL043C YDL218WQ07629 317 aa3.32□□□□□ -1.88
PTA1YAL043C FIT2Q08906 153 aa3.32□□□□□ -1.88
PTA1YAL043C YDL009CQ12210 107 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms