RNA–Protein interactions for RNA: YAL021C

CCR4, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CCR4, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCR4YAL021C RAF1Q06891 181 aa6.18□□□□□ -1.42
CCR4YAL021C FYV4P38783 130 aaPredicted RBP6.17□□□□□ -1.42
CCR4YAL021C ROT1Q03691 256 aa6.17□□□□□ -1.42
CCR4YAL021C YCL021W-AQ96VH3 125 aa6.17□□□□□ -1.42
CCR4YAL021C YLL053CP0CD98 152 aa6.17□□□□□ -1.42
CCR4YAL021C PBI2P0CT04 75 aaKnown RBP6.17□□□□□ -1.42
CCR4YAL021C GPX1P36014 167 aa6.17□□□□□ -1.42
CCR4YAL021C SNF11P38956 169 aa6.17□□□□□ -1.42
CCR4YAL021C DAD1Q12248 94 aa6.17□□□□□ -1.42
CCR4YAL021C COX17Q12287 69 aa6.17□□□□□ -1.42
CCR4YAL021C TRP1P00912 224 aa6.16□□□□□ -1.42
CCR4YAL021C MRS3P10566 314 aa6.16□□□□□ -1.42
CCR4YAL021C YPL073CP40323 161 aa6.16□□□□□ -1.42
CCR4YAL021C DSK2P48510 373 aa6.16□□□□□ -1.42
CCR4YAL021C HEM4P06174 275 aa6.16□□□□□ -1.42
CCR4YAL021C RPA12P32529 125 aaKnown RBP6.16□□□□□ -1.42
CCR4YAL021C YML079WQ03629 201 aa6.16□□□□□ -1.42
CCR4YAL021C YHM2Q04013 314 aa6.16□□□□□ -1.42
CCR4YAL021C FSH2Q05015 223 aa6.16□□□□□ -1.42
CCR4YAL021C STP3Q05937 343 aa6.16□□□□□ -1.42
CCR4YAL021C YHR140WP38842 239 aa6.15□□□□□ -1.42
CCR4YAL021C CTF8P38877 133 aa6.15□□□□□ -1.42
CCR4YAL021C IGO1P53897 168 aa6.15□□□□□ -1.42
CCR4YAL021C GAT3Q07928 141 aa6.15□□□□□ -1.42
CCR4YAL021C NHP2P32495 156 aaPredicted RBP6.14□□□□□ -1.43
CCR4YAL021C SMP1P38128 452 aa6.14□□□□□ -1.43
CCR4YAL021C MBB1P39534 108 aa6.14□□□□□ -1.43
CCR4YAL021C YLR281CQ05863 155 aa6.14□□□□□ -1.43
CCR4YAL021C YDR042CQ03205 200 aa6.14□□□□□ -1.43
CCR4YAL021C RIM9Q04734 239 aa6.14□□□□□ -1.43
CCR4YAL021C YMR317WQ04893 1140 aa6.14□□□□□ -1.43
CCR4YAL021C YLR302CO13544 120 aa6.13□□□□□ -1.43
CCR4YAL021C VHS2P40463 436 aa6.13□□□□□ -1.43
CCR4YAL021C YFL041W-AQ3E817 63 aa6.13□□□□□ -1.43
CCR4YAL021C IGO2Q9P305 131 aa6.13□□□□□ -1.43
CCR4YAL021C HST4P53688 370 aa6.13□□□□□ -1.43
CCR4YAL021C YLR296WQ05898 108 aa6.13□□□□□ -1.43
CCR4YAL021C YIL169CP40442 995 aa6.12□□□□□ -1.43
CCR4YAL021C SME1Q12330 94 aaPredicted RBP6.12□□□□□ -1.43
CCR4YAL021C PAU1P0CE88 120 aa6.11□□□□□ -1.43
CCR4YAL021C PAU14P0CE89 120 aa6.11□□□□□ -1.43
CCR4YAL021C PAU6P0CE90 120 aa6.11□□□□□ -1.43
CCR4YAL021C PAU18P0CE91 120 aa6.11□□□□□ -1.43
CCR4YAL021C PAU8P0CE92 120 aa6.11□□□□□ -1.43
CCR4YAL021C PAU11P0CE93 120 aa6.11□□□□□ -1.43
CCR4YAL021C YMC1P32331 307 aa6.11□□□□□ -1.43
CCR4YAL021C ISF1P32488 338 aa6.11□□□□□ -1.43
CCR4YAL021C PAU13P38725 120 aa6.11□□□□□ -1.43
CCR4YAL021C YFR054CP43622 192 aa6.11□□□□□ -1.43
CCR4YAL021C PAU12P53343 120 aa6.11□□□□□ -1.43
CCR4YAL021C PAU10Q03050 120 aa6.11□□□□□ -1.43
CCR4YAL021C PAU20Q08322 120 aa6.11□□□□□ -1.43
CCR4YAL021C YPR071WQ12346 211 aa6.11□□□□□ -1.43
CCR4YAL021C PAU9Q3E770 120 aa6.11□□□□□ -1.43
CCR4YAL021C ERG4P25340 473 aa6.11□□□□□ -1.43
CCR4YAL021C GPI18P38211 433 aa6.11□□□□□ -1.43
CCR4YAL021C BUD8P41698 603 aa6.11□□□□□ -1.43
CCR4YAL021C TIS11P47977 285 aa6.11□□□□□ -1.43
CCR4YAL021C YGR164WP53291 111 aa6.11□□□□□ -1.43
CCR4YAL021C CPD1P53314 239 aa6.11□□□□□ -1.43
CCR4YAL021C PAU4P53427 120 aa6.11□□□□□ -1.43
CCR4YAL021C IES4Q08561 116 aa6.11□□□□□ -1.43
CCR4YAL021C YDL180WQ12301 547 aa6.11□□□□□ -1.43
CCR4YAL021C YPR064WQ12492 139 aa6.11□□□□□ -1.43
CCR4YAL021C DIF1O13577 133 aa6.1□□□□□ -1.43
CCR4YAL021C YHL018WP38744 120 aaPredicted RBP6.1□□□□□ -1.43
CCR4YAL021C YPL062WQ02781 134 aa6.1□□□□□ -1.43
CCR4YAL021C ELP6Q04868 273 aa6.1□□□□□ -1.43
CCR4YAL021C PAU2P32612 120 aa6.1□□□□□ -1.43
CCR4YAL021C RFM1Q12192 310 aa6.1□□□□□ -1.43
CCR4YAL021C AGA2P32781 87 aa6.09□□□□□ -1.43
CCR4YAL021C SVP26P38869 228 aa6.09□□□□□ -1.43
CCR4YAL021C YAR068WP39564 161 aa6.09□□□□□ -1.43
CCR4YAL021C HPA2Q06592 156 aa6.09□□□□□ -1.43
CCR4YAL021C RPS10AQ08745 105 aaPredicted RBP6.09□□□□□ -1.43
CCR4YAL021C YNR064CP53750 290 aa6.09□□□□□ -1.43
CCR4YAL021C CCH1P50077 2039 aa6.09□□□□□ -1.43
CCR4YAL021C RPL20AP0CX23 172 aaKnown RBP6.08□□□□□ -1.44
CCR4YAL021C RPL20BP0CX24 172 aaPredicted RBP6.08□□□□□ -1.44
CCR4YAL021C AUR1P36107 401 aaPredicted RBP6.08□□□□□ -1.44
CCR4YAL021C SWT21P53873 357 aaPredicted RBP6.08□□□□□ -1.44
CCR4YAL021C YOR292CQ08743 309 aa6.08□□□□□ -1.44
CCR4YAL021C DFM1Q12743 341 aaKnown RBP6.08□□□□□ -1.44
CCR4YAL021C YMR175W-AQ3E766 64 aa6.08□□□□□ -1.44
CCR4YAL021C RRT15Q3E811 62 aa6.08□□□□□ -1.44
CCR4YAL021C CYR1P08678 2026 aaKnown RBP6.08□□□□□ -1.44
CCR4YAL021C RPL30P14120 105 aaKnown RBP6.08□□□□□ -1.44
CCR4YAL021C YRA2P36036 203 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
CCR4YAL021C NRG2P38082 220 aa6.08□□□□□ -1.44
CCR4YAL021C ECM34P38728 170 aa6.08□□□□□ -1.44
CCR4YAL021C YOL162WP0CF19 215 aa6.07□□□□□ -1.44
CCR4YAL021C CSH1P38287 376 aa6.07□□□□□ -1.44
CCR4YAL021C INM1P38710 295 aa6.07□□□□□ -1.44
CCR4YAL021C SDS23P53172 527 aa6.07□□□□□ -1.44
CCR4YAL021C MST27P53176 234 aa6.07□□□□□ -1.44
CCR4YAL021C IRC25Q07951 179 aa6.07□□□□□ -1.44
CCR4YAL021C NDD1Q08887 554 aa6.07□□□□□ -1.44
CCR4YAL021C ODC2Q99297 307 aa6.07□□□□□ -1.44
CCR4YAL021C TOM6P33448 61 aa6.07□□□□□ -1.44
CCR4YAL021C MRPL27P36526 146 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 77.5 ms