RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	COL16A1	Q07092	1604 aa	Predicted RBP	6.98	□□□□□ -1.29
NRXN1-223	ENST00000625891	CDHR4	A6H8M9	788 aa		6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	AHSG	P02765	367 aa		6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	ITGB1	P05556	798 aa		6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	GCSH	P23434	173 aa		6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	NEK3	P51956	506 aa		6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	SLFN5	Q08AF3	891 aa		6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	TUBA3C	Q13748	450 aa		6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	TOB2	Q14106	344 aa	Predicted RBP	6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	FGL2	Q14314	439 aa		6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	KIF22	Q14807	665 aa		6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	CNN3	Q15417	329 aa	Known RBP	6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	TUBA3E	Q6PEY2	450 aa		6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	PDSS2	Q86YH6	399 aa		6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	TMPRSS6	Q8IU80	811 aa		6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	RHOT2	Q8IXI1	618 aa		6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	SPICE1	Q8N0Z3	855 aa		6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	MTFMT	Q96DP5	389 aa	Known RBP	6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	C22orf23	Q9BZE7	217 aa		6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	BHMT2	Q9H2M3	363 aa		6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	RLIM	Q9NVW2	624 aa		6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	CEP72	Q9P209	647 aa		6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	STAP2	Q9UGK3	403 aa		6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	ZDHHC8	Q9ULC8	765 aa		6.97	□□□□□ -1.29
NRXN1-223	ENST00000625891	ADAMTS13	Q76LX8	1427 aa		6.96	□□□□□ -1.3
NRXN1-223	ENST00000625891	AHRR	A9YTQ3	701 aa		6.96	□□□□□ -1.3
NRXN1-223	ENST00000625891	ZNF185	O15231	689 aa		6.96	□□□□□ -1.3
NRXN1-223	ENST00000625891	FAM193A	P78312	1265 aa		6.96	□□□□□ -1.3
NRXN1-223	ENST00000625891	CRHR2	Q13324	411 aa		6.96	□□□□□ -1.3
NRXN1-223	ENST00000625891	CNGB1	Q14028	1251 aa	Predicted RBP	6.96	□□□□□ -1.3
NRXN1-223	ENST00000625891	UTP14C	Q5TAP6	766 aa	Known RBP	6.96	□□□□□ -1.3
NRXN1-223	ENST00000625891	FITM2	Q8N6M3	262 aa		6.96	□□□□□ -1.3
NRXN1-223	ENST00000625891	LARP4B	Q92615	738 aa	Known RBP	6.96	□□□□□ -1.3
NRXN1-223	ENST00000625891	DDX17	Q92841	729 aa	Known RBP	6.96	□□□□□ -1.3
NRXN1-223	ENST00000625891	ZNF703	Q9H7S9	590 aa	Predicted RBP	6.96	□□□□□ -1.3
NRXN1-223	ENST00000625891	MMRN2	Q9H8L6	949 aa		6.96	□□□□□ -1.3
NRXN1-223	ENST00000625891	GNL3L	Q9NVN8	582 aa	Known RBP	6.96	□□□□□ -1.3
NRXN1-223	ENST00000625891	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	6.96	□□□□□ -1.3
NRXN1-223	ENST00000625891	NRXN3	Q9Y4C0	1643 aa		6.96	□□□□□ -1.3
NRXN1-223	ENST00000625891	KDM5A	P29375	1690 aa	Known RBP	6.96	□□□□□ -1.3
NRXN1-223	ENST00000625891	PCSK5	Q92824	1860 aa		6.96	□□□□□ -1.3
NRXN1-223	ENST00000625891	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	6.96	□□□□□ -1.3
NRXN1-223	ENST00000625891	APAF1	O14727	1248 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	TRIM24	O15164	1050 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	AGFG2	O95081	481 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	FOS	P01100	380 aa	Predicted RBP	6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	GJB1	P08034	283 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	NPR1	P16066	1061 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	AK2	P54819	239 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	NOMO3	P69849	1222 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	SEMA5A	Q13591	1074 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	NOMO2	Q5JPE7	1267 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	APOA5	Q6Q788	366 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	CCDC149	Q6ZUS6	474 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	MORC1	Q86VD1	984 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	ENAH	Q8N8S7	591 aa	Predicted RBP	6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	TMIE	Q8NEW7	156 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	BRIX1	Q8TDN6	353 aa	Known RBP	6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	NUP133	Q8WUM0	1156 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	ANKS1A	Q92625	1134 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	GJA10	Q969M2	543 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	KLHL32	Q96NJ5	620 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	GPR35	Q9HC97	309 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	KLHL11	Q9NVR0	708 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	TAGLN3	Q9UI15	199 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	PCDHA6	Q9UN73	950 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	FAM50B	Q9Y247	325 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	ADGRL2	O95490	1459 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	UNC13B	O14795	1591 aa		6.95	□□□□□ -1.3
NRXN1-223	ENST00000625891	FAM135B	Q49AJ0	1406 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	RIMS2	Q9UQ26	1411 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	CCDC78	A2IDD5	438 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	DIRC3	C9JPN6	131 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891		E9PLN8	166 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	PMM2	O15305	246 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	FRS3	O43559	492 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	ANXA1	P04083	346 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	ADH4	P08319	380 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	CKB	P12277	381 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	HDC	P19113	662 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	ARFIP2	P53365	341 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	CACNB3	P54284	484 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	EXOSC9	Q06265	439 aa	Known RBP	6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	RABL3	Q5HYI8	236 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	C10orf62	Q5T681	223 aa	Predicted RBP	6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	LRRC55	Q6ZSA7	311 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	TOGARAM2	Q6ZUX3	1019 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	DNAJC10	Q8IXB1	793 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	IL31RA	Q8NI17	732 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	TBC1D15	Q8TC07	691 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	ZNF483	Q8TF39	744 aa	Predicted RBP	6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	TNPO1	Q92973	898 aa	Known RBP	6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	PHACTR3	Q96KR7	559 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	DCLRE1C	Q96SD1	692 aa	Known RBP	6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	VKORC1	Q9BQB6	163 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	TEX101	Q9BY14	249 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	BRD9	Q9H8M2	597 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	NLRC4	Q9NPP4	1024 aa		6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	VSX1	Q9NZR4	365 aa	Predicted RBP	6.94	□□□□□ -1.3
NRXN1-223	ENST00000625891	CFAP97	Q9P2B7	532 aa		6.94	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms