RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 UBQLN1Q9UMX0 589 aaKnown RBP19.3■□□□□ 0.68
SNAPC3-207ENST00000610884 A8MXQ7 604 aa19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 PIRO00625 290 aa19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 RNF40O75150 1001 aa19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 ERBB2P04626 1255 aa19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 ATF7P17544 494 aaPredicted RBP19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 ADORA2BP29275 332 aa19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 ATICP31939 592 aa19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 TAF5Q15542 800 aa19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 TXNRD3NBQ6F5E7 133 aa19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 ZDHHC14Q8IZN3 488 aa19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 JOSD2Q8TAC2 188 aa19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 KBTBD7Q8WVZ9 684 aa19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 TSPAN16Q9UKR8 245 aa19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 MYO1FO00160 1098 aa19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 TAS2R40P59535 323 aa19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 NKX3-2P78367 333 aa19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 CKAP4Q07065 602 aaKnown RBP19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 USP38Q8NB14 1042 aa19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 TMEM35BQ8NCS4 154 aa19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 RNPC3Q96LT9 517 aaKnown RBP19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 B3GNT5Q9BYG0 378 aa19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 RASSF4Q9H2L5 321 aa19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 SYNCQ9H7C4 482 aa19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 KIAA0100Q14667 2235 aaKnown RBP19.29■□□□□ 0.68
SNAPC3-207ENST00000610884 GPR182O15218 404 aa19.28■□□□□ 0.68
SNAPC3-207ENST00000610884 PQBP1O60828 265 aaKnown RBP19.28■□□□□ 0.68
SNAPC3-207ENST00000610884 IVLP07476 585 aa19.28■□□□□ 0.68
SNAPC3-207ENST00000610884 ZNF252P-AS1Q0IIN9 211 aa19.28■□□□□ 0.68
SNAPC3-207ENST00000610884 CD302Q8IX05 232 aa19.28■□□□□ 0.68
SNAPC3-207ENST00000610884 TET1Q8NFU7 2136 aa19.28■□□□□ 0.68
SNAPC3-207ENST00000610884 CLDN5O00501 218 aa19.28■□□□□ 0.68
SNAPC3-207ENST00000610884 RFC1P35251 1148 aaPredicted RBP19.28■□□□□ 0.68
SNAPC3-207ENST00000610884 PEX5P50542 639 aa19.28■□□□□ 0.68
SNAPC3-207ENST00000610884 WSCD1Q658N2 575 aa19.28■□□□□ 0.68
SNAPC3-207ENST00000610884 APBB1IPQ7Z5R6 666 aaPredicted RBP19.28■□□□□ 0.68
SNAPC3-207ENST00000610884 ANKS1BQ7Z6G8 1248 aa19.28■□□□□ 0.68
SNAPC3-207ENST00000610884 PHF13Q86YI8 300 aaPredicted RBP19.28■□□□□ 0.68
SNAPC3-207ENST00000610884 SLAIN1Q8ND83 568 aa19.28■□□□□ 0.68
SNAPC3-207ENST00000610884 NDRG1Q92597 394 aaKnown RBP19.28■□□□□ 0.68
SNAPC3-207ENST00000610884 PPP1R10Q96QC0 940 aaKnown RBP19.28■□□□□ 0.68
SNAPC3-207ENST00000610884 HERPUD2Q9BSE4 406 aa19.28■□□□□ 0.68
SNAPC3-207ENST00000610884 NT5C1AQ9BXI3 368 aa19.28■□□□□ 0.68
SNAPC3-207ENST00000610884 HEMGNQ9BXL5 484 aa19.28■□□□□ 0.68
SNAPC3-207ENST00000610884 TSPYL2Q9H2G4 693 aaPredicted RBP19.28■□□□□ 0.68
SNAPC3-207ENST00000610884 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.28■□□□□ 0.68
SNAPC3-207ENST00000610884 PI4K2BG5E9Z4 385 aa19.27■□□□□ 0.68
SNAPC3-207ENST00000610884 KRIT1O00522 736 aa19.27■□□□□ 0.68
SNAPC3-207ENST00000610884 ITGB1P05556 798 aa19.27■□□□□ 0.68
SNAPC3-207ENST00000610884 GLI1P08151 1106 aa19.27■□□□□ 0.68
SNAPC3-207ENST00000610884 P4HA1P13674 534 aa19.27■□□□□ 0.68
SNAPC3-207ENST00000610884 SH3PXD2AQ5TCZ1 1133 aa19.27■□□□□ 0.68
SNAPC3-207ENST00000610884 VRTNQ9H8Y1 702 aa19.27■□□□□ 0.68
SNAPC3-207ENST00000610884 B4GALT3O60512 393 aa19.27■□□□□ 0.67
SNAPC3-207ENST00000610884 SYF2O95926 243 aaKnown RBP19.27■□□□□ 0.67
SNAPC3-207ENST00000610884 PFKMP08237 780 aa19.27■□□□□ 0.67
SNAPC3-207ENST00000610884 KCNE1P15382 129 aa19.27■□□□□ 0.67
SNAPC3-207ENST00000610884 GNL1P36915 607 aaPredicted RBP19.27■□□□□ 0.67
SNAPC3-207ENST00000610884 GPD2P43304 727 aa19.27■□□□□ 0.67
SNAPC3-207ENST00000610884 PTK7Q13308 1070 aa19.27■□□□□ 0.67
SNAPC3-207ENST00000610884 GOLGA7BQ2TAP0 167 aa19.27■□□□□ 0.67
SNAPC3-207ENST00000610884 MAP9Q49MG5 647 aa19.27■□□□□ 0.67
SNAPC3-207ENST00000610884 PMF1Q6P1K2 205 aa19.27■□□□□ 0.67
SNAPC3-207ENST00000610884 OSTM1Q86WC4 334 aa19.27■□□□□ 0.67
SNAPC3-207ENST00000610884 TTC30AQ86WT1 665 aa19.27■□□□□ 0.67
SNAPC3-207ENST00000610884 SCUBE3Q8IX30 993 aa19.27■□□□□ 0.67
SNAPC3-207ENST00000610884 HPCAL4Q9UM19 191 aa19.27■□□□□ 0.67
SNAPC3-207ENST00000610884 PCBP1Q15365 356 aaKnown RBP eCLIP19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 SGO2Q562F6 1265 aa19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 DCUN1D2Q6PH85 259 aa19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 CLEC4CQ8WTT0 213 aa19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 RIN2Q8WYP3 895 aaPredicted RBP19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 CD101Q93033 1021 aa19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 SCLYQ96I15 445 aa19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 RPS6KC1Q96S38 1066 aa19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 MIS12Q9H081 205 aa19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 UVRAGQ9P2Y5 699 aa19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 HCSTQ9UBK5 93 aa19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 AMACRQ9UHK6 382 aa19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 E5RJQ4 531 aa19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 GABBR2O75899 941 aa19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 THP07101 528 aa19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 XKR4Q5GH76 650 aa19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 ZFYVE27Q5T4F4 411 aa19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 LIN9Q5TKA1 542 aa19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 KIAA0319Q5VV43 1072 aa19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 PLEKHA7Q6IQ23 1121 aa19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 TRAF7Q6Q0C0 670 aa19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 DDX42Q86XP3 938 aaKnown RBP eCLIP19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 GOLGA6L1Q8N7Z2 621 aa19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 BEGAINQ9BUH8 593 aa19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 VIPAS39Q9H9C1 493 aa19.26■□□□□ 0.67
SNAPC3-207ENST00000610884 MCM3P25205 808 aa19.25■□□□□ 0.67
SNAPC3-207ENST00000610884 BRCC3P46736 316 aa19.25■□□□□ 0.67
SNAPC3-207ENST00000610884 INCA1Q0VD86 236 aa19.25■□□□□ 0.67
SNAPC3-207ENST00000610884 SMTNL2Q2TAL5 461 aa19.25■□□□□ 0.67
SNAPC3-207ENST00000610884 KCNT1Q5JUK3 1230 aa19.25■□□□□ 0.67
SNAPC3-207ENST00000610884 C11orf63Q6NUN7 778 aa19.25■□□□□ 0.67
SNAPC3-207ENST00000610884 DNAJC24Q6P3W2 148 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms